Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0347 ATGGACAATTATGGTTCTTCACCTTCATATCCGTATGTAAGTCATCCATATTCAAATCCTCATCCAATTCCTTCTATATATCCACCTCCAAGTACAGATCCTCCATATCCTCCTCCTCATCTTCATCCTCCTCCTCATCTTCATCCTCCTCAATATCCGTCTCCACCTCCCCCTTCAGATCCATATGCATCTTCTCCTTACCCTTACCAACAATACGATTCCTTCCCTCATTTGTATCAACCACCGCCTCACCTTGTTTCACACTCTCATTCAGGCCCCTTAGACTATCAACCTGGGCCAGGTCCATATGGATATCCACATCGGGCCTCTCCAAGCTATCATAGTGGTCCTTTACCAACTCTTCAACATCAGAGTAGTTTCCAATACGATTCATCTCAGTACCACCATCAACAACCCAGTCCATACCCTCCCCATGAAAACCAACCTCATACCCCTTCTCGTGCCGATAGCTTTTCTGGCTTCCACAGAAATGATAGTATTGGTTCCACTAGCTGTCACTCCTCTCATTACCCCTCTTTAGATGACCTTTTGAGTAATGTTCATTTGTCTGATAATCGCCCTTCTGCCCCTGCATCACCCCCTGCACCTTCAGTGTATGATAGGCAGGAAAGCCTTTATGGCTATCCGAATTCCTCTTTTCCTAGTAATTCGTCACCAGACCCTCCCATTTATCACCATTCGAGCTCATATAATGGGTCACACCATGGTCAGAGTACTGTGATTGTGCCCTTGCCTAGTAAAGGTTCCTTGAAGGTTTTGCTTTTACATGGGAATTTAGAAATTTGGGTCCATGGAGCACAAAATCTTCCCAACATGGACATGTTTCACAAAACTTTGGGGGATGTGTTTTCAAAAATACCTGGGAATATTATCAACAAAATGGACGGACGTGTAAGTGACACAATCACTAGCGATCCTTATGTGTCTATTTCGATTGCAAATGCTGTTATTGGGAGGACATTTGTGATTAGCAATAGCGAAAATCCTGTCTGGAGTCAATATTTCTATGTTCCAGTTGCTCATTCTGCTGCTGAAGTTCATTTTGTTGTGAAAGACAATGATGTAGTCGGTTCCCAGCTTATAGGAGTTGTCTCAATTCCAGTAGAGCAGCTGTATTCTGGGGCTAAAATTGAGGGAGTCTATCCGATCCTGAATACTAGTGGGAAGCCATGTAAACCTGGAGCTACTTTAACTCTTTCGATTCAGTATATCCCTATGAAAAATCTAAGTATTTATCATCATGGAGTTGGGGCAGGACCTGATTATCATGGGGTCCCAGGAACATATTTTCCTCTTAGAAAAGGTGGGACCGTCACTCTTTACCAAGATGCTGATGTTCCTGATGGGTCTCTGCCAAATGTGAAGCTCAATCATGGGATGTATTATGTGCATGGTAAGTGTTGGGGTGATATCTTTGATGCTATAAGGCATGCCCAACGTTTGATTTACATCACCGGGTGGTCAGTGTGGCACAAAGTCAGACTAGTTAGAGATGCTGGCTTTGCATCAGATGTTACTCTTGGAGATCTTCTAAGGTCCAAGTCGCAAGAAGGAGTGAGAGTGCTATTACTTGTTTGGGATGATCCCACCTCCAGGAGCATCTTGGGTTATAAAACAAATGGTGTCATGCAGACTCATGATGAGGAAACCCGTCGGTTTTTCAAGCACTCTTCAGTTCAAGTGCTTCTTTGTCCTCGCATGGCTGGAAAACGGCATAGCTTGGTCAAGAAAACGGAAGTTGGAACAATTTATACTCACCATCAGAAAACTGTAATAGTGGATGCTGAAGCTGGCAATCGGGGAAGAAAGATTATAGCTTTTGTTGGAGGACTAGATATATGTGACGGGCGATATGATTCTCCACAGCATCCTATATTTCGGTCACTACAGACATTGCACAAGGATGATTATCACAATCCTACGTTCACAGGTAACGTAGTTGGTTGTCCAAGAGAACCCTGGCATGATTTGCACAGTAAAATAGATGGTCCAGCGGCTTATGATGTCCTTACCAACTTTGAGGAGCGCTGGCGAAAGGCTTCAAAACCCCAAGGGATTAAAAAACTGAAAATGACATATGATGATTCTTTGCTGAGACTAGAAAGAATTCCTGAACTAATAGGTGTATCCGAGGCTTATTCCGAAAATGAGAATGATCCTGATACTTGGCATGTTCAGATTTTCCGTTCTATCGACTCGAATTCTGTTAAGGGTTTTCCAAAGGATCCAAAAGATGCCACAAGCAAGAATCTCATGTGTGGCAAGAATATGCTGATTGACATGAGCATACACACAGCATACGTCAAGGCCATTCGTGCTGCCCAGCACTTCATTTATATAGAGAACCAATATTTCATTGGATCATCATTCAATTGGAATTCAAACAAAGATCTCGGTGCTAATAATTTGATTCCAATGGAAATTGCCCTTAAGATTGTGGAAAAAATCAGAGCAAATGAGAGATTTGCTGTTTATATTGTTATTCCAATGTGGCCGGAGGGTGTTCCTACTGGTGCTGCAACTCAGAGAATTCTATTTTGGCAGAACAAAACAATGCAAATGATGTATGAGATGGTTTACAAGGCTTTGGTCGAGGTAGGGCTTGAAGGTGCATACTCGCCACAAGATTACTTAAACTTCTTCTGTCTCGGAAACCGTGAGGTAGTTGATCGGAATGATCCTTCTGGCACTGCAAATCGTCCTAATTCAGAAACCACTCCACAGGCACTTAGTTGTAAGAACCGACGGTTTATGATATATGTTCATTCCAAAGGCATGATTGTTGACGATGAATACGTAATAGTGGGGTCCGCAAACATCAATCAACGCTCCTTGGAAGGCACTAGAGACACTGAGATTGCAATGGGGGCCTACCAGCCTCATAATACTTGGGCCAGAAAACTCGCAAACCCTCTTGGACAGATCCATGGATATAGAATGTCATTATGGGCCGAGCATATTGGATGGCTTGAAGAATGTTTTACAGCACCGGAAAGCCTAGAATGTGTTAAGAGGGTGAGATCGATAGGGGAGTTGAACTGGAAGCAATTTGCTGATGATGAGGTAACAGAAATGAGAGGGCATCTTTTGAAGTACCCGGTAGAAGTTGATAGAACAGGAAAGGTCAGATCCCTTCCTGGCTATGAAAATTTCCCAGATGTTGGTGGCAAAATAGTTGGTTCATTCCTTGCCATTCAGGAAAATCTCACCATCTAA 3237 43.06 MDNYGSSPSYPYVSHPYSNPHPIPSIYPPPSTDPPYPPPHLHPPPHLHPPQYPSPPPPSDPYASSPYPYQQYDSFPHLYQPPPHLVSHSHSGPLDYQPGPGPYGYPHRASPSYHSGPLPTLQHQSSFQYDSSQYHHQQPSPYPPHENQPHTPSRADSFSGFHRNDSIGSTSCHSSHYPSLDDLLSNVHLSDNRPSAPASPPAPSVYDRQESLYGYPNSSFPSNSSPDPPIYHHSSSYNGSHHGQSTVIVPLPSKGSLKVLLLHGNLEIWVHGAQNLPNMDMFHKTLGDVFSKIPGNIINKMDGRVSDTITSDPYVSISIANAVIGRTFVISNSENPVWSQYFYVPVAHSAAEVHFVVKDNDVVGSQLIGVVSIPVEQLYSGAKIEGVYPILNTSGKPCKPGATLTLSIQYIPMKNLSIYHHGVGAGPDYHGVPGTYFPLRKGGTVTLYQDADVPDGSLPNVKLNHGMYYVHGKCWGDIFDAIRHAQRLIYITGWSVWHKVRLVRDAGFASDVTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTNGVMQTHDEETRRFFKHSSVQVLLCPRMAGKRHSLVKKTEVGTIYTHHQKTVIVDAEAGNRGRKIIAFVGGLDICDGRYDSPQHPIFRSLQTLHKDDYHNPTFTGNVVGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPQGIKKLKMTYDDSLLRLERIPELIGVSEAYSENENDPDTWHVQIFRSIDSNSVKGFPKDPKDATSKNLMCGKNMLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSFNWNSNKDLGANNLIPMEIALKIVEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYEMVYKALVEVGLEGAYSPQDYLNFFCLGNREVVDRNDPSGTANRPNSETTPQALSCKNRRFMIYVHSKGMIVDDEYVIVGSANINQRSLEGTRDTEIAMGAYQPHNTWARKLANPLGQIHGYRMSLWAEHIGWLEECFTAPESLECVKRVRSIGELNWKQFADDEVTEMRGHLLKYPVEVDRTGKVRSLPGYENFPDVGGKIVGSFLAIQENLTI 1078
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1617072 1623160 + Conep15aG0035400.1 Cone15ag0347 453475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0347 1078 Gene3D Endonuclease Chain A 467 705 - -
Cone15ag0347 1078 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 589 624 IPR001736 GO:0003824(InterPro)
Cone15ag0347 1078 CDD C2_plant_PLD 258 411 - -
Cone15ag0347 1078 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 924 951 IPR001736 GO:0003824(InterPro)
Cone15ag0347 1078 PANTHER PHOSPHOLIPASE D 261 1066 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cone15ag0347 1078 FunFam Phospholipase D delta 465 703 - -
Cone15ag0347 1078 FunFam Phospholipase D delta 259 406 - -
Cone15ag0347 1078 Gene3D Endonuclease Chain A 734 981 - -
Cone15ag0347 1078 MobiDBLite consensus disorder prediction 21 64 - -
Cone15ag0347 1078 Pfam C2 domain 264 389 IPR000008 -
Cone15ag0347 1078 SMART pld_4 924 951 IPR001736 GO:0003824(InterPro)
Cone15ag0347 1078 SMART pld_4 589 624 IPR001736 GO:0003824(InterPro)
Cone15ag0347 1078 SMART C2_3c 265 387 IPR000008 -
Cone15ag0347 1078 SUPERFAMILY Phospholipase D/nuclease 467 688 - -
Cone15ag0347 1078 SUPERFAMILY Phospholipase D/nuclease 717 1010 - -
Cone15ag0347 1078 Gene3D C2 domain 259 402 IPR035892 -
Cone15ag0347 1078 Pfam Phospholipase D Active site motif 926 951 IPR001736 GO:0003824(InterPro)
Cone15ag0347 1078 Pfam Phospholipase D Active site motif 591 624 IPR001736 GO:0003824(InterPro)
Cone15ag0347 1078 Pfam Phospholipase D C terminal 998 1068 IPR024632 -
Cone15ag0347 1078 MobiDBLite consensus disorder prediction 211 237 - -
Cone15ag0347 1078 ProSiteProfiles C2 domain profile. 243 388 IPR000008 -
Cone15ag0347 1078 MobiDBLite consensus disorder prediction 150 193 - -
Cone15ag0347 1078 MobiDBLite consensus disorder prediction 21 237 - -
Cone15ag0347 1078 MobiDBLite consensus disorder prediction 115 141 - -
Cone15ag0347 1078 FunFam Phospholipase D 737 970 - -
Cone15ag0347 1078 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 257 414 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0366 Cone-Chr11:1794006 Cone15ag0347 Cone-Chr15:1617072 0 dispersed
Cone15ag0347 Cone-Chr15:1617072 Cone17ag1431 Cone-Chr17:9772248 7.63e-319 dispersed
Cone11ag0365 Cone-Chr11:1793418 Cone15ag0347 Cone-Chr15:1617072 3.76E-72 transposed
Cone14ag0317 Cone-Chr14:1494360 Cone15ag0347 Cone-Chr15:1617072 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0347 K01115 - csv:101218942 1534.24