Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0348 ATGGCGAATCTTCAGAGAGGAGAACTCGAAAAAGACGAAGAGACGCGAGCCGTTGCCGTGAGAACAAACGGCCGAGATGAAAACCTGCTTAGAACCGGGTCCGGAAAGGATAAGGATCCGGGACCGAGCAAAGCTCTCGCTTTAGCTCTAAAAGAAGAAGTGGAAGACCCGATCACGGCAATTCAGGTCGTGTCGGCTGCGGTAGCTCAGCCTGCGAAGAGAGCAACGACTAAGGACCGCCACACGAAAGTGGAGGGTCGTGGTCGGAGGATCCGAATGCCCGCCACTTGCGCCGCCCGTATTTTCCAGCTGACCCGGGAACTCGGCCACAAGTCCGACGGAGAAACTATCAGATGGCTCCTCGAGCACGCCGAGCCGGCGATCATAGCCGCCACCGGTACCGGAACCATTCCCGCCATAGCCATGTCCGTTAACGGAACTCTTACTATCCCTACTACCCGACCCTCCGAACCGGAAACAAGCGACCCGTTAGCCAAGAAGAAGAGGAAAAAACCTGTTAACGGTGATCACGGGGACGTAAACGACGCCGTTACCGTGTCCGTCTCAAACGGTCTATCTACCACCACTACTGCTACCACTACCACACAGCAGCAACAAGGTTTACCACAGGGTTTAGTTCCTATGTGGGCCATACCTTCAAACGCCGTCGTTCCGGGGGCGTTCTTCATGTTCCCGCCGGTAGCTTCGATTGCCGGATCTTCAACCCAACCGCAGATATTTACATTTCCGGCAGCTTCGACTCCTCTTGTTAACATTTCGGCGAGACCTATTTCGTCTTTCATGTCATACCTACCTAACTCGACTACAACGAATTCGAATTCGAGTAATGCTACATCGACGTCGTCTAAATCTGATCAATCAGTCATGGCGCCGATTTCTTCTAGCTCCGGTAAGACGACGGCGAATAACAGCACAGCGACGACAACGCCTCAGCTGCTTAGAGATTTTTCTTTAGAGATTTACGATAAGCAAGAGCTTCAGTTCATGTCACGGTCCTCAAAACATTGA 1029 52.58 MANLQRGELEKDEETRAVAVRTNGRDENLLRTGSGKDKDPGPSKALALALKEEVEDPITAIQVVSAAVAQPAKRATTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTIPAIAMSVNGTLTIPTTRPSEPETSDPLAKKKRKKPVNGDHGDVNDAVTVSVSNGLSTTTTATTTTQQQQGLPQGLVPMWAIPSNAVVPGAFFMFPPVASIAGSSTQPQIFTFPAASTPLVNISARPISSFMSYLPNSTTTNSNSSNATSTSSKSDQSVMAPISSSSGKTTANNSTATTTPQLLRDFSLEIYDKQELQFMSRSSKH 342
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 1623578 1625294 - Conep15aG0035500.1 Cone15ag0348 453476
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0348 342 MobiDBLite consensus disorder prediction 1 21 - -
Cone15ag0348 342 MobiDBLite consensus disorder prediction 149 182 - -
Cone15ag0348 342 MobiDBLite consensus disorder prediction 274 316 - -
Cone15ag0348 342 MobiDBLite consensus disorder prediction 1 43 - -
Cone15ag0348 342 Pfam TCP family transcription factor 76 164 IPR017887 -
Cone15ag0348 342 MobiDBLite consensus disorder prediction 160 177 - -
Cone15ag0348 342 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Cone15ag0348 342 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 71 287 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0348 Cone-Chr15:1623578 Cone9ag0744 Cone-Chr9:3534491 2.27E-64 dispersed
Cone14ag0318 Cone-Chr14:1501325 Cone15ag0348 Cone-Chr15:1623578 8.78E-166 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44832 PF02493 MORN 2.60E-06 CL0251 Cone TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0348 - - - 0.0