Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag0383 | ATGGATCGAAGAGACCCAGCAGGATTTTCCGGGTCACAATCTTTCTATATGCAGCAGAGAGAAACATCTCCAAATCTACAATTCCAATCCTACCCTGAAAGCAATACCATTGGAGGACCAACTTTACCAGCCGAACCATCCTCTAGAATTTCACGTTATGGTGTTAATATGGGCGTTGCAATTTCCGGAGCGCCCCCTAGCGAGCCTGTCAAGAGGAAAAGAGGAAGGCCTAGGAAATACGGACTGGACCGGACTTTCTCATTGGCCTTGTCCCCCTCATCTTCTACAAATCCCGGGACAATGACATCAGCAAGAAAAAGGCCTAGAGGGCGGCCGCCCGGGTCCGGCAAGAAGCCACAATTATTAGCTTCTCCCGAAAAATGGAAGCTGTCTGATTCGGCGGGGATGGGATTTACCCCTCATATTATCACCATTGCAATAGGAGAAGACATTGCAACAAAAATTATGTCGTTTTCAGAACAGGGGCTGAGGGGCGTATGTGTCTTATCAGCAAATGGTTTGGTTTCTTCTGTTACTCTACGTCAGCCTTCTTCTTCAGGAGCCACTGTAACATTCGAGGGGCATTTTGAGATAATATCTCTTTCAGGCTCGTACATGTTTAGCGATGGTGATAGTAGCTCCAGCCGGAACTTTTCTGGCAGCTTAAGCATATCGGTTGCTAGTCCCGATGGTTGTGTTATTGGAGGCGGAGTTGGAGGATTGCTTATTGCTGCAAGCCCTGTTCAGGTTATATTGGGGAGCTTCTTATGGCGCGGTTCAAACACAAAGAGCAAGAATAGAGAAGCTAAAGAAGGTGTCATTGACACGGATCGTCGAACAGTAGATGATCCAATGGCTATAAGTGGTTTGCTGTCAGATCAACAAACTCTGATCACTCCGATCAATTCCGAAAGTGTTTGGACCTCAATGGATATGTCTAATGCCCATAATATGGACATTGATTTGATGCGAGGATGA | 978 | 46.42 | MDRRDPAGFSGSQSFYMQQRETSPNLQFQSYPESNTIGGPTLPAEPSSRISRYGVNMGVAISGAPPSEPVKRKRGRPRKYGLDRTFSLALSPSSSTNPGTMTSARKRPRGRPPGSGKKPQLLASPEKWKLSDSAGMGFTPHIITIAIGEDIATKIMSFSEQGLRGVCVLSANGLVSSVTLRQPSSSGATVTFEGHFEIISLSGSYMFSDGDSSSSRNFSGSLSISVASPDGCVIGGGVGGLLIAASPVQVILGSFLWRGSNTKSKNREAKEGVIDTDRRTVDDPMAISGLLSDQQTLITPINSESVWTSMDMSNAHNMDIDLMRG | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1761417 | 1763852 | - | Conep15aG0039200.1 | Cone15ag0383 | 453511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag0383 | 325 | Gene3D | - | 140 | 275 | - | - | |
Cone15ag0383 | 325 | MobiDBLite | consensus disorder prediction | 11 | 42 | - | - | |
Cone15ag0383 | 325 | MobiDBLite | consensus disorder prediction | 87 | 103 | - | - | |
Cone15ag0383 | 325 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 28 | 278 | IPR039605 | GO:0003680(InterPro) | |
Cone15ag0383 | 325 | CDD | DUF296 | 139 | 231 | IPR005175 | - | |
Cone15ag0383 | 325 | SMART | AT_hook_2 | 71 | 83 | IPR017956 | GO:0003677(InterPro) | |
Cone15ag0383 | 325 | SMART | AT_hook_2 | 106 | 118 | IPR017956 | GO:0003677(InterPro) | |
Cone15ag0383 | 325 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 138 | 257 | - | - | |
Cone15ag0383 | 325 | PRINTS | AT-hook-like domain signature | 104 | 115 | IPR017956 | GO:0003677(InterPro) | |
Cone15ag0383 | 325 | PRINTS | AT-hook-like domain signature | 71 | 81 | IPR017956 | GO:0003677(InterPro) | |
Cone15ag0383 | 325 | ProSiteProfiles | PPC domain profile profile. | 134 | 277 | IPR005175 | - | |
Cone15ag0383 | 325 | MobiDBLite | consensus disorder prediction | 1 | 125 | - | - | |
Cone15ag0383 | 325 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 140 | 255 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0383 | Cone-Chr15:1761417 | Cone6ag0720 | Cone-Chr6:3625087 | 2.15E-58 | dispersed | |
Cone11ag0417 | Cone-Chr11:2068492 | Cone15ag0383 | Cone-Chr15:1761417 | 1.02E-95 | wgd | |
Cone12ag0311 | Cone-Chr12:1708357 | Cone15ag0383 | Cone-Chr15:1761417 | 4.14E-38 | wgd | |
Cone14ag0350 | Cone-Chr14:1623455 | Cone15ag0383 | Cone-Chr15:1761417 | 1.85E-181 | wgd | |
Cone15ag0383 | Cone-Chr15:1761417 | Cone18ag1088 | Cone-Chr18:7983114 | 3.38E-101 | wgd | |
Cone15ag0383 | Cone-Chr15:1761417 | Cone6ag0774 | Cone-Chr6:3945485 | 2.78E-50 | wgd | |
Cone15ag0383 | Cone-Chr15:1761417 | Cone8ag0311 | Cone-Chr8:1798718 | 9.28E-62 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag0383 | - | - | - | 0.0 |