Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag0402 | ATGGACATGGCCATTGCTTTTTTGGTTCTAACGGCTATAACGGCTTACCTCCTCTGGTTCACCTTCATCTCCCGGTCACTGAAGGGGCCGCGTGTCTGGCCTTTATTGGGTAGTCTCCCCGGCCTCATCAAAAACTGCGAGCGCATGCATGACTGGATCTGCGAGAATCTGCGCGCCTGCGGCGGCACGTACCAGACCTGCATCTTGGCGATTCCCTTCTACGCTAAAAAGCACGGCCTCGTCACCGTCACGTGCGACCCGAGAAATCTGGAGCATATATTGAAGACCCGGTTTGATAATTACCCGAAGGGACCCAAATGGCAAGCTGTGTTTCATGATCTTCTCGGGAAAGGGATCTTCAATTCCGATGGCGACACGTGGCTCACGCAGAGAAAGACCGCCGCATTGGAATTTACCACCAGAACTCTCCGCCAAGCAATGGCAAGGTGGGTAAGCCGAGCCATTAAGCTACGATTCTGTCCTGTTCTCCAGTCGGCTGAGCTTAACAATGAGCCGGTTGATCTACAAGACTTGCTGCTTCGGCTCACGTTTGATAACATATGCGGCTTGGCTTTCGGTAAGGATCCTCAAACTTGCGCGTCGGGGCTTCCAGAAAACGGCTTCGCGTCAGCTTTCGATCGAGCCACCGAAGCCTCTCTGCAAAGATTCATTTTGCCTGAAGTTCTGTGGAAATTCAAGAAATGGCTTGGGCTTGGTATGGAGGTCAGCTTGAGCCGGAGCATCTTTCACATAGAAGAGTACTTATCCAGTGTTATCGATTCACGAAAGCTCGAGCTGCAGAGTCAGCAAAAATATGGCAATCCACACGACGATTTACTCTCAAGGTTCATGAAGAAGAAGAAGACCTCAGATTCCGACCTCAAACACGTGGCACTCAACTTCATCCTAGCTGGACGAGACACATCATCAGTCGCTCTGTGCTGGTTCTTCTGGTTGATGATCCAACACCCAACCGTCGAAGAAAAGGTCTTACGCGAAATTTGCACCGTTCTGATCGAGACACGCGGCGATGATGTATCCACCTGGTTAAACGAACCGCTAGGATTCGAAGAACTCGACCGTCTGGTTTACCTAAAGGCGGCGCTATCTGAAACCCTACGGCTCTATCCATCAGTTCCGGAGGACTCGAAATACGTAATCGCCGACGATGTGCTGCCCGACGGCACATTTGTTCCGGCGGGGTCGTCAGTGACGTACTCGATCTATTCAGCAGGGAGGATGAAATCGACGTGGGGAGAGGATTGCTTAGAGTTCCGTCCAGATCGGTGGTTAGCAAGCTCCGACGATCAAAACGGTAAGAAATTCTTCATGCACGAAGGATACAAATTCATCGCTTTTAACGCCGGACCGAGAGTCTGTTTGGGAAGAGATCTAGCGTATCTGCAGATGAAATCGATAGCGACGGAGGTGCTGCTCCGACACCGGCTGACGGTGGTTCCCGGCCACAAGGTGGAGCAGAAGATGTCGTTGACGTTGTTCATGAAGTACGGGCTGAGGGTTAATTTGAATCGTAGAGATTTGGCGAAGATGATAAAAGACGTTAAAACCGCCGTTGCACGTGACGGCTATCGTAACGGCGTTAGTGGCGGTGGAGAGCGGGAAAAGGTAGTTGAGAATTCTTAA | 1644 | 51.16 | MDMAIAFLVLTAITAYLLWFTFISRSLKGPRVWPLLGSLPGLIKNCERMHDWICENLRACGGTYQTCILAIPFYAKKHGLVTVTCDPRNLEHILKTRFDNYPKGPKWQAVFHDLLGKGIFNSDGDTWLTQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPVLQSAELNNEPVDLQDLLLRLTFDNICGLAFGKDPQTCASGLPENGFASAFDRATEASLQRFILPEVLWKFKKWLGLGMEVSLSRSIFHIEEYLSSVIDSRKLELQSQQKYGNPHDDLLSRFMKKKKTSDSDLKHVALNFILAGRDTSSVALCWFFWLMIQHPTVEEKVLREICTVLIETRGDDVSTWLNEPLGFEELDRLVYLKAALSETLRLYPSVPEDSKYVIADDVLPDGTFVPAGSSVTYSIYSAGRMKSTWGEDCLEFRPDRWLASSDDQNGKKFFMHEGYKFIAFNAGPRVCLGRDLAYLQMKSIATEVLLRHRLTVVPGHKVEQKMSLTLFMKYGLRVNLNRRDLAKMIKDVKTAVARDGYRNGVSGGGEREKVVENS | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 1882916 | 1884807 | - | Conep15aG0041100.1 | Cone15ag0402 | 453530 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag0402 | 547 | Pfam | Cytochrome P450 | 28 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | SUPERFAMILY | Cytochrome P450 | 27 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | CDD | CYP86A | 67 | 505 | - | - | |
| Cone15ag0402 | 547 | FunFam | Cytochrome P450 | 21 | 515 | - | - | |
| Cone15ag0402 | 547 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone15ag0402 | 547 | Gene3D | Cytochrome P450 | 24 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PANTHER | CYTOCHROME P450 | 16 | 505 | - | - | |
| Cone15ag0402 | 547 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0402 | 547 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone15ag0402 | Cone-Chr15:1882916 | Cone1ag0585 | Cone-Chr1:5854590 | 2.68E-238 | dispersed | |
| Cone12ag0301 | Cone-Chr12:1644993 | Cone15ag0402 | Cone-Chr15:1882916 | 7.37E-287 | wgd | |
| Cone14ag0365 | Cone-Chr14:1691857 | Cone15ag0402 | Cone-Chr15:1882916 | 0 | wgd | |
| Cone15ag0402 | Cone-Chr15:1882916 | Cone8ag0297 | Cone-Chr8:1714016 | 7.12E-282 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag0402 | K15398 | - | cit:127901167 | 889.797 |