Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0414 ATGGATTCCGCCTCTGCCGCTGCTGCTGCTGCTTCTTCAGTTGATCATAACAACATAAGAGGAGTCTACACACATGGTGGATACTACGTCCGATACAATGTGTACGGAATCTCTTCGAAGTTTCTAGAAAGTACGTTCCTCCACTCAGCCCTATTGGACGAGGCGCTTATGGTATTGTCTGGTTTGGAAAAAAGTGCTGCTCTGAATTCAGAGAGATGCGAGGAGGTTGCTATTAAGAAGATTGGAAATGCATTTGACAACAGAATTGATGCTAAACGGACTTTACGAGAGATCAAACTTCTTCGTCACATGGATCATGAGAAAGTTGTTGCTATTAAAGACATAATAAGGCCTCCACAAATGAATAATTTCAATGATGTTTACATTGTATATGAACTAATGGACGCTGATCTCCATCAAATCATCGCCTCCAATCAAACATTGACAGATGACCATTGTCGGTACTTTCTCTACCAGTTGTTAAGGGGGCTCAAATATGTACATTCTGCTAATGTTCTTCATCGTGATCTTAAGCCCAGCAATTTATTCTTGAACGCTAATTGCGACCTTAAGATTGGAGATTTTGGTCTTGAATTCACTGGCGCTATTGATATATGGTCCATTGGTTGCATACTTGGCGAAATTGTGACCAGAAAACCGCTCTTTCCTGGCAAAGATTATGTTCATCAGCTTAGGCTTGTCACTGACGTTCGCCCCTTGGATGTTTACGCAGTGAGAATGCAAGGAGATACGTTAGACAGCTTCCGCAATACCCTAAGCAACAATTTTTTTGCGAAATTTCCCAACTTGTCTCCTGGAGCTGTCAATTTGTTAGAGAAAATGCTTGTTTTCGATCCCAACCAGCGAATTACAGTTGATGAGGCGCTATGCCATCCATACTTGGCACCCCTCCACAATATCAATGAGAAGCCAATTTGCCCGAGGCCTTGCAGTTTCGATTTTGAGCAGCCATCTTTCACTGAAGAAAACATCAAAGAACTCATCTGGAGAGAATCTGTAAACTTCAATCCCAACCTGACTCGTTGA 1047 42.22 MDSASAAAAAASSVDHNNIRGVYTHGGYYVRYNVYGISSKFLESTFLHSALLDEALMVLSGLEKSAALNSERCEEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHEKVVAIKDIIRPPQMNNFNDVYIVYELMDADLHQIIASNQTLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLEFTGAIDIWSIGCILGEIVTRKPLFPGKDYVHQLRLVTDVRPLDVYAVRMQGDTLDSFRNTLSNNFFAKFPNLSPGAVNLLEKMLVFDPNQRITVDEALCHPYLAPLHNINEKPICPRPCSFDFEQPSFTEENIKELIWRESVNFNPNLTR 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1946029 1948059 - Conep15aG0042300.1 Cone15ag0414 453542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0414 348 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 67 198 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone15ag0414 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag0414 348 FunFam Mitogen-activated protein kinase 134 200 - -
Cone15ag0414 348 Pfam Protein kinase domain 67 197 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0414 348 Pfam Protein kinase domain 200 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0414 348 SUPERFAMILY Protein kinase-like (PK-like) 67 306 IPR011009 -
Cone15ag0414 348 ProSiteProfiles Protein kinase domain profile. 35 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0414 348 Gene3D Phosphorylase Kinase; domain 1 64 133 - -
Cone15ag0414 348 Gene3D Transferase(Phosphotransferase) domain 1 134 198 - -
Cone15ag0414 348 Gene3D Transferase(Phosphotransferase) domain 1 199 322 - -
Cone15ag0414 348 Gene3D Phosphorylase Kinase; domain 1 323 344 - -
Cone15ag0414 348 SMART serkin_6 56 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0414 348 FunFam Mitogen-activated protein kinase 61 144 - -
Cone15ag0414 348 ProSitePatterns MAP kinase signature. 85 188 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0414 Cone-Chr15:1946029 Cone18ag0309 Cone-Chr18:1516153 5.81E-135 dispersed
Cone12ag0287 Cone-Chr12:1551932 Cone15ag0414 Cone-Chr15:1946029 1.04E-146 wgd
Cone14ag0377 Cone-Chr14:1764585 Cone15ag0414 Cone-Chr15:1946029 6.28E-181 wgd
Cone15ag0414 Cone-Chr15:1946029 Cone6ag0803 Cone-Chr6:4083500 6.02E-145 wgd
Cone15ag0414 Cone-Chr15:1946029 Cone8ag0281 Cone-Chr8:1625057 2.38E-149 wgd
Cone15ag0414 Cone-Chr15:1946029 Cone9ag0801 Cone-Chr9:3846444 2.59E-146 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82137 PF01885 PTS_2-RNA 1.30E-54 CL0084 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0414 K20600 - sly:100534642 466.077