Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0416 ATGTCTATATACGACGCGTCGTTTGTAAACACGGAGCTATCAAAACCGACATCTATCTTCGGCCTACGTCTCTGGGTCGTGATCGGAATCCTAGTCGGAGCACTCATCGTCATCCTCCTCTTCCTCTTCTCTCTCTGCCTCACTTCTCGCCGGAACCGGAACCGTAATCGGAACCAAACCCATCTACCCAAACAGCAGCAACACTCTTCCACTCCACCCGTCGTTTCAAAGGAGATCCAGGAAATCGTACACCACGCCGCACCAGATCACCACCACCCTCAGCCGGAAATCCACGTGGAGATAGGGAAATTGGAGCATAGGGTTATCTTTTCCGACCGGCCGTCGAGTGGAGAGAGCAGAGGTGGGTTGAGCGATACGGTGTCAGTGGGATCGGTCGGTGTGGGGCCCGAGGTATCGCATCTGGGTTGGGGAAGATGGTATACTTTGAGAGACCTTGAAGAAGCTACGAATGGATTGTGTGAAGAGAATGTAATTGGAGAGGGTGGGTATGGGATTGTTTATCATGGCGTTTTAGGTGATGGTACTAAAATTGCAGTGAAGAATCTCTTGAACAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTGGAAGTGGAAGTAATTGCACGAGTTAGACACAAGAATCTAGTGAGGCTGCTTGGATACTGCGTTGAGGGTGCTTACAGGATGCTTGTCTATGAGTACATTGACAACGGAAATCTCGATCAATGGCTTCATGGTGATGTTGGTGATGTCAGCCCTCTGACATGGAATATTCGCGTCAACATTATCTTGGGAACAGCCAAGGGACTAGCCTATCTTCATGAAGGTCTTGAGCCAAAGGTTGTCCACAGAGATGTAAAATCAAGCAACATACTACTTGATCGCCAATGGAATGCTAAGGTATCAGATTTCGGTCTTGCTAAGCTCCTTTGCTCTGAGAGAAGTTACGTGACTACTCGTGTCATGGGAACATTCGGATATGTTGCACCCGAATATGCTTGCACCGGAATGTTAAATGAGAAGAGTGATGTTTATAGCTTTGGAATACTTCTTATGGAGTTGATTTCTGGAAGAAGCCCTGTTGATTATAGCCGGCCCAAAGGAGAGGTCAATTTGGTGGAGTGGTTAAAAACTATGGTTGGAAACCAAAAATCAGAGGAAGTGGTCGATCCAAAAATGCCTGAGATGCCTTCTTCAAAAGCACTTAAACGGATTTTGCTTGTTGCTCTTCGATGTGTGGACCCGGATGCAACAAAGAGGCCAAAAATGGGACATGTCATCCACATGCTTGAGGCCGATGACTTATTATACCAGGATGAAAATCGGATTGGTCGAGATTCTTCTTCTCATTCGGGTCGTGATATTCATCAAGAAGAGAATCATGCCGTCAGGAAAGTGAGTGATAAGGAAAAAGGGGAAGGGACCTCTAGATGGAGATAA 1440 46.81 MSIYDASFVNTELSKPTSIFGLRLWVVIGILVGALIVILLFLFSLCLTSRRNRNRNRNQTHLPKQQQHSSTPPVVSKEIQEIVHHAAPDHHHPQPEIHVEIGKLEHRVIFSDRPSSGESRGGLSDTVSVGSVGVGPEVSHLGWGRWYTLRDLEEATNGLCEENVIGEGGYGIVYHGVLGDGTKIAVKNLLNNRGQAEREFKVEVEVIARVRHKNLVRLLGYCVEGAYRMLVYEYIDNGNLDQWLHGDVGDVSPLTWNIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILLMELISGRSPVDYSRPKGEVNLVEWLKTMVGNQKSEEVVDPKMPEMPSSKALKRILLVALRCVDPDATKRPKMGHVIHMLEADDLLYQDENRIGRDSSSHSGRDIHQEENHAVRKVSDKEKGEGTSRWR 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1952683 1955856 - Conep15aG0042500.1 Cone15ag0416 453544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0416 479 Pfam Protein tyrosine and serine/threonine kinase 162 429 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag0416 479 Gene3D Transferase(Phosphotransferase) domain 1 235 446 - -
Cone15ag0416 479 MobiDBLite consensus disorder prediction 443 479 - -
Cone15ag0416 479 FunFam Probable serine/threonine-protein kinase At1g01540 139 234 - -
Cone15ag0416 479 CDD STKc_IRAK 165 431 - -
Cone15ag0416 479 FunFam Putative receptor-like serine/threonine-protein kinase 235 445 - -
Cone15ag0416 479 SMART serkin_6 159 436 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0416 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag0416 479 Gene3D Phosphorylase Kinase; domain 1 142 234 - -
Cone15ag0416 479 ProSiteProfiles Protein kinase domain profile. 159 436 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0416 479 PANTHER OS01G0323000 PROTEIN 7 466 IPR052232 -
Cone15ag0416 479 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524(InterPro)
Cone15ag0416 479 SUPERFAMILY Protein kinase-like (PK-like) 137 431 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0416 Cone-Chr15:1952683 Cone7ag1363 Cone-Chr7:9883587 2.08E-204 dispersed
Cone14ag0379 Cone-Chr14:1772637 Cone15ag0416 Cone-Chr15:1952683 2.62e-316 wgd
Cone14ag0057 Cone-Chr14:335657 Cone15ag0416 Cone-Chr15:1952683 2.52E-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82138 PF07714 PK_Tyr_Ser-Thr 2.20E-35 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0416 - - - 0.0