Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0479 ATGGCTTCGGATCATAAAGTGTATACCTTTGATGAAGTCTCAAACCACAACCAGAAGAAAGATATCTGGATTATAATTTCTGGAAAGGTTTATGATGTCACCCCATTTCTAGAAGAACACCCCGGAGGCGACGAAGTCTTGCTGCTAGCAGCTGAGAGAGATGCAACAGATGATTTTGAGGATGTGGGCCATAGCGAAAATGCGCAAGAACTGATGGAGAAATACTACGTGGGGAAAGTGGACAAATCTACCCTTCCAGCTCGGCCAGATTACCGCCCACCCCAACCACCACCTCAACCAGACCAATCTCCGGGTTTTTTGGTCAAGCTCTTGCAGTTTCTGCTTCCTTTGGTGATCTTAGGCCTTGCTTATGGCCTTCAATATTTTCGCAAAAAGGAGTGA 402 46.02 MASDHKVYTFDEVSNHNQKKDIWIIISGKVYDVTPFLEEHPGGDEVLLLAAERDATDDFEDVGHSENAQELMEKYYVGKVDKSTLPARPDYRPPQPPPQPDQSPGFLVKLLQFLLPLVILGLAYGLQYFRKKE 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2260879 2263057 + Conep15aG0049000.1 Cone15ag0479 453607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0479 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cone15ag0479 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cone15ag0479 133 Gene3D - 1 86 IPR036400 -
Cone15ag0479 133 SMART Cyt_b5_2 8 81 IPR001199 -
Cone15ag0479 133 MobiDBLite consensus disorder prediction 89 103 - -
Cone15ag0479 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 92 IPR036400 -
Cone15ag0479 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cone15ag0479 133 PANTHER CYTOCHROME B5 4 126 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cone15ag0479 133 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cone15ag0479 133 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cone15ag0479 133 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cone15ag0479 133 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cone15ag0479 133 MobiDBLite consensus disorder prediction 84 103 - -
Cone15ag0479 133 FunFam Cytochrome b5 type B 2 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0479 Cone-Chr15:2260879 Cone18ag0994 Cone-Chr18:7305465 8.28E-58 dispersed
Cone1ag1008 Cone-Chr1:55070293 Cone15ag0479 Cone-Chr15:2260879 8.67E-49 wgd
Cone14ag0449 Cone-Chr14:2102538 Cone15ag0479 Cone-Chr15:2260879 4.26E-80 wgd
Cone15ag0479 Cone-Chr15:2260879 Cone5ag0716 Cone-Chr5:3082824 3.28E-33 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0479 K23490 - mdm:103424638 171.785