Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag0480 | ATGGCTTCCAAATGCAGAGCTCTCTCTCACCACCACGCGGCATGCCTTCTTCTGATCATCACCCTTATTGGGCTTCTCTTCACCTTGCTTCACTGGGCTCACCCAGGCGGCCCAGCTTGGGGCAAGCACTACTTATGCCGCTCATACTGGACGAGAACTAGTCTTAATACATTGATCATTCCCGGCCCGAGAGGCTTGCCTTTAATAGGCAGCATGAGCCTCATGGCGCACTTGGCTCACCGTCGTATTGCAGCCATGGCTGAAGCTTGTGCGGCTAAGCGTCTCATGGCCTTCAGCCTCGGCAACACTCGAGTGATCGTCACGTGCAATCCTGACGTGGCGAGAGAAATCTTGAACAGCTCGGTTTTCGCTGATCGGCCCGTCAAGGAATCGGCTTACACCTTGATGTTTAACAGGGCTATTGGCTTCGCTCCTTACGGGGTTTACTGGCGGACACTACGTCGGATTGCTACGAACCATCTTTTCTGTCCGAAGCAGATTAAGGAGTCTGAGACACAGAGACGCCATGTCGTTTCGCAGATAGTTGAAATCTTCGGCAGTTACGGTGACTGCAGTTTCTCTGTTCGTGAAGTGGTGAAACGAGCTTCGTTGAGTAATATGATGTGCTCAGTTTTCGGTCGGGTATATCCGTTGGATTCGGGTCGTAAGTACGATGACGTGGACGAGTTGAAGAAGCTTGTTGATGAAGGATATGATTTATTAGGCTTATTGAATTGGTCTGATCATCTTCACTTCCTAGCTGACTTTGATGCTCAGAAAATCCGGTTCAGGTGCTCTCAGCTTGTGCCCAAAGTGAACCGATTCGTTTCGCGAATTATCTCCGAGAAACGAGATAAAACCGGGAAAGAATTGCGAGATTTTGTCGACGTCTTATTGACTCTTCAAGGACCAGAGAAATTGTCCGACTCCGATATGATCGCTGTTCTTTGGGAAATGATTTTTCGTGGAACAGATACGGTGGCGGTATCTATCGAGTGGATACTAGCGAGGATGGTGATTCATCAGGAGGTTCAATCAACGGTCCATGCTGAGCTGGACAAAGTCGTCGGCAGATCAACAGCAGTTGCTGAGTCTGACATTTCCTCGTTAGTGTATCTAACGGCTGTGATTAAGGAGGTCTTGAGGCTACATCCACCGGGCCCACTTTTATCGTGGGCCCGACTGGCCATAAATGATACGACAATTGATGGGTATCATGTCCCCCAGGGGACCACAGCGATGGTCAATATGTGGTCAATTGCGCGGGACCCACAAATATGGGAGGACCCACTGGAATTTATGCCCCAGCGATTTGTAGCCCAAGATGGAGAAGCAGAATTTTCTATTATGGGCTCGGATCTTAGGCTCGCACCTTTCGGCTCAGGTAGACGGACCTGCCCGGGTAAGAACCTGGGTCTAACTACCATTCAGTTTTGGGTGGCTTCGCTATTGCATGATTTCGAATGGTTACCGTCAGATCAGACAGCGGTTAATCTGTCGGAGGTTCTTAAGCTTTCGTGTGAGATGGCCCACCCTCTGACCGTTAAAGTACGCGCAAGGCGTAGCTTAAGCTCCTCTACCTGTTAG | 1587 | 49.84 | MASKCRALSHHHAACLLLIITLIGLLFTLLHWAHPGGPAWGKHYLCRSYWTRTSLNTLIIPGPRGLPLIGSMSLMAHLAHRRIAAMAEACAAKRLMAFSLGNTRVIVTCNPDVAREILNSSVFADRPVKESAYTLMFNRAIGFAPYGVYWRTLRRIATNHLFCPKQIKESETQRRHVVSQIVEIFGSYGDCSFSVREVVKRASLSNMMCSVFGRVYPLDSGRKYDDVDELKKLVDEGYDLLGLLNWSDHLHFLADFDAQKIRFRCSQLVPKVNRFVSRIISEKRDKTGKELRDFVDVLLTLQGPEKLSDSDMIAVLWEMIFRGTDTVAVSIEWILARMVIHQEVQSTVHAELDKVVGRSTAVAESDISSLVYLTAVIKEVLRLHPPGPLLSWARLAINDTTIDGYHVPQGTTAMVNMWSIARDPQIWEDPLEFMPQRFVAQDGEAEFSIMGSDLRLAPFGSGRRTCPGKNLGLTTIQFWVASLLHDFEWLPSDQTAVNLSEVLKLSCEMAHPLTVKVRARRSLSSSTC | 528 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 2267032 | 2268718 | - | Conep15aG0049100.1 | Cone15ag0480 | 453608 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag0480 | 528 | PANTHER | CYTOCHROME P450 78A7-RELATED | 12 | 517 | IPR051996 | - | |
| Cone15ag0480 | 528 | CDD | CYP78 | 93 | 513 | - | - | |
| Cone15ag0480 | 528 | Pfam | Cytochrome P450 | 61 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | SUPERFAMILY | Cytochrome P450 | 60 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | E-class P450 group I signature | 416 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | E-class P450 group I signature | 331 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | E-class P450 group I signature | 374 | 392 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | E-class P450 group I signature | 311 | 328 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | FunFam | Cytochrome P450 78A5 | 52 | 520 | - | - | |
| Cone15ag0480 | 528 | Gene3D | Cytochrome P450 | 49 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | PRINTS | P450 superfamily signature | 322 | 339 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0480 | 528 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone15ag0480 | Cone-Chr15:2267032 | Cone6ag0519 | Cone-Chr6:2591809 | 2.90E-161 | dispersed | |
| Cone11ag0515 | Cone-Chr11:2677425 | Cone15ag0480 | Cone-Chr15:2267032 | 5.62E-264 | wgd | |
| Cone14ag0450 | Cone-Chr14:2111433 | Cone15ag0480 | Cone-Chr15:2267032 | 0 | wgd | |
| Cone15ag0480 | Cone-Chr15:2267032 | Cone18ag0995 | Cone-Chr18:7308166 | 1.04E-268 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag0480 | K20619 | - | mdm:103406216 | 726.857 |