Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0501 ATGGCACAAATATCCCAACACGAGCAAATTATCGAAATCGGAGATGATCGTGACAATGGAGAGGCCGGGAAGTTCATAGGAGGAACTAAGATTTGCGGGGAAGCGCCTTGTGGATTCTCGGATGCGGGGTCAACGTCCAAGGACGCCAAAGAACGAGTAGCTTCCATGCGAAAGCTACTAATCGCAGTCTCGCTATGTATTATCTTCATGAGCGTAGAAGTCGTAGGCGGCATCAAAGCCAATAGTCTTGCCATCCTAACTGATGCAGCCCACTTGCTATCTGACGTGGCAGCCTTTGCCATCTCACTATTATCTCTGTGGGCTGCGGGCTGGGAAGCCACACCTCGTCAGAGTTACGGGTTTTTCCGGGTCGAGATTTTAGGTGCCTTAATCTCCATCCAACTCATATGGTTACTCGCCGGGATCTTAGTATATGAAGCCATTGTTAGAATCATTAATGACACAGGTGATGTTAACGGGTTTCTAATGTTTTTAGTTGCTGCCTTTGGTCTAGTTGTCAATATCATTATGGCCGTCTTGCTCGGCCATGATCATGGTCATAGTCATGGTCATGATCATGGACATGGAGATCATGGTCATGATCATGGACATGGAGATCATGGTCATGGTGTGATGGTTTCCAGTACTTATCACCATCACGATCATGATCACCACCATGATCATGAACATGATCATACCCATGAAGAGAAAATAGAACCACTTTTGAATCAATCAAAGAAGAAACGGAACATAAACGTGCAAGGGGCATATCTCCATGTATTAGGGGACTCGGTTCAGAGTATAGGGGTAATGATTGGAGGGGCGATCATATGGTACAAGCCAGAGTGGAAGATTGTAGATGTGATCTGTACACTTGTTTTTTCGGTTATTGTTTTGGGGACGACGATTCGGATGCTTCGGAATATTCTAGAGGTTTTAATGGAGAGCACGCCAAGAGAGATTGATGCAACGAAGCTCGAAACGGGCTTGTTGGAGATGGAAGAAGTTGTGGCAATTCACGAGCTTCACATTTGGGCCATAACCGTGGGAAAAGTCCTTTTGGCCTGCCATGTCAAAGTCCGGCCTGAAGCAGATGCTGACTCAGTCTTGGACAATGTTGTAGACTATATAAGGAGGGAGTATAACATCAGTCATGTAACTATACAGATAGAACGTTAG 1179 45.55 MAQISQHEQIIEIGDDRDNGEAGKFIGGTKICGEAPCGFSDAGSTSKDAKERVASMRKLLIAVSLCIIFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLLSLWAAGWEATPRQSYGFFRVEILGALISIQLIWLLAGILVYEAIVRIINDTGDVNGFLMFLVAAFGLVVNIIMAVLLGHDHGHSHGHDHGHGDHGHDHGHGDHGHGVMVSSTYHHHDHDHHHDHEHDHTHEEKIEPLLNQSKKKRNINVQGAYLHVLGDSVQSIGVMIGGAIIWYKPEWKIVDVICTLVFSVIVLGTTIRMLRNILEVLMESTPREIDATKLETGLLEMEEVVAIHELHIWAITVGKVLLACHVKVRPEADADSVLDNVVDYIRREYNISHVTIQIER 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2403507 2405797 + Conep15aG0051300.1 Cone15ag0501 453629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0501 392 Pfam Cation efflux family 59 314 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone15ag0501 392 MobiDBLite consensus disorder prediction 210 236 - -
Cone15ag0501 392 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 28 392 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Cone15ag0501 392 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 320 391 IPR036837 -
Cone15ag0501 392 Gene3D Cation efflux protein transmembrane domain 55 313 IPR027469 -
Cone15ag0501 392 SUPERFAMILY Cation efflux protein transmembrane domain-like 56 315 IPR027469 -
Cone15ag0501 392 NCBIfam cation diffusion facilitator family transporter 56 392 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0501 Cone-Chr15:2403507 Cone7ag1091 Cone-Chr7:8274402 1.22E-95 dispersed
Cone12ag0570 Cone-Chr12:4186403 Cone15ag0501 Cone-Chr15:2403507 1.18E-144 transposed
Cone8ag0583 Cone-Chr8:4840321 Cone15ag0501 Cone-Chr15:2403507 1.15E-181 transposed
Cone14ag0467 Cone-Chr14:2241184 Cone15ag0501 Cone-Chr15:2403507 7.88E-213 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0501 K14689 - vvi:100259043 548.125