Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0511 ATGGGTTTTGTGCAATTTGAAGATCAAGATCATCATAACCAGGTTTTAAGCTTCTTAACAGTACCCTCCTCGCAATCAGCTCAAATTTCACAACCGCCCCTCACTGGCAGCAGCAACGGTGGCGGAACACCCTCAACCACCATCTTGGCGGCCGGCTTTAGTGCTAGACCACCATGGAGTAACGACCAGGTGGGAACCATGGATTCTTCTAGGGCTATTAACGAGGAGAATTGTACCGGTAATGGTAGCGATAGCGGCAATACATGGTGGAGATCAAGTTCAATCTCAGAAAAGAGCAAAGTGAAAGTGAGAAGGAAGCTAAGAGAGCCAAGGTTCTGTTTTCAGACAAGAAGTGAAGTAGATGTTCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGTTATTACCGTTGTACGCATAGCAACTGTCGGGTGAAGAAGAGAGTCGAACGGCTCTCGGAAGATTGCCGGATGGTGATAACAACATATGAAGGTAGACATAACCATTCTCCATGTGATGACTCCAATTCATCCGATCATGAATGCTTTTCATCTTTCTGA 594 44.95 MGFVQFEDQDHHNQVLSFLTVPSSQSAQISQPPLTGSSNGGGTPSTTILAAGFSARPPWSNDQVGTMDSSRAINEENCTGNGSDSGNTWWRSSSISEKSKVKVRRKLREPRFCFQTRSEVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSDHECFSSF 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2482764 2485539 - Conep15aG0052300.1 Cone15ag0511 453639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0511 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 188 IPR044810 GO:0003700(InterPro)
Cone15ag0511 197 SUPERFAMILY WRKY DNA-binding domain 115 181 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone15ag0511 197 FunFam WRKY transcription factor 57 109 183 - -
Cone15ag0511 197 SMART WRKY_cls 123 182 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone15ag0511 197 Gene3D WRKY domain 110 176 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone15ag0511 197 ProSiteProfiles WRKY domain profile. 118 180 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone15ag0511 197 MobiDBLite consensus disorder prediction 27 49 - -
Cone15ag0511 197 Pfam WRKY DNA -binding domain 124 180 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0511 Cone-Chr15:2482764 Cone9ag1265 Cone-Chr9:9395529 1.34E-45 dispersed
Cone11ag0527 Cone-Chr11:2860831 Cone15ag0511 Cone-Chr15:2482764 4.20E-69 wgd
Cone14ag0482 Cone-Chr14:2345784 Cone15ag0511 Cone-Chr15:2482764 1.48E-87 wgd
Cone15ag0511 Cone-Chr15:2482764 Cone7ag0493 Cone-Chr7:2269946 6.10E-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44853 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0511 - - - 0.0