Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0519 ATGACTCGAGCTAGGGACATCGAGAGGATTCAGGAGCTGAAAGCATTTCCCGTAAAAGTGCCCTTAGAGAAGGTTCTAGAATCAAAGAAACTACCGGAAAAGTTGTGTGTTGTGGCTGAGGTTTCCAATGCTCATACAGCCTCAGGAAAGGAAGAATTCAAGTTATCAAATGCTCGCTTTGCTTTGGTAAGAGAAGTCAGTCGATCTGATGGATGGGATTCTCCGGATTCAGGCTCTCCTGTTTCTGCACCATCTGTCAGAACATGGAAAGGAAAAGCCTCTTTGTCCGAGCCAGAAGAAGAGCGCAAGCTTGAAATCTCATTCAAAGGCAAAAATGGCTGTTCATTAGAGGCTGGCCTTGATTCTTTCTCTGGTGCATCTCATCCTTCAGAGCCCATTGATACCGATCCTATGAGAACTGTTTATGTTCCAGTTGATCGGAATAAATCCGAAGCTGGACGCTTGATGAAGAGCTTGTCTAGGAAAGGTCCTCCTCTAGGGCTTGCTAAGAAACCTACCTCTTCTATTCTTTCCTCTGTAGAAAGCTCAGTTGAAGAAGAACCTAATGACATGCAAAAACCCGAGAAATCACCTCTTCCTCAAGATTCTGAGGAAAGGGATTGTGTTTGGGACGCTTCATTGCCTCCTAGTGCCAATGTAAGTCCACATAGTAGTATTGAAAGCACTGATGTTATGAGTATGAGAATGATGAACAGTAGGTGTTCCGGTACATATCAGAGTGAAGGAAATGATATGCTTACTATGGAAGGGAACTGTGATAGGAAACAAAGTAGTAGAGTGGCTTCACTTGAGAGTGCAAAGACAAGTATTAGCCGAGCAAGTGATAGTAGTGGTCTTAGTGATGAGAGTAATTGGAGCAACATAACTGGAAGTGCTAATAAGCCTCATAAAGGGAACGATCCAAGGTGGATGGCTATTCTTGCTATCAGAACAAGAGATGGGATGTTGGGCATGAGTCATTTTAAATTGCTAAAAAGGCTCGGTTGTGGTGATATTGGTAGTGTTTATTTGTCGGAACTTACTGGGACCTATTGTTGCTTTGCGATGAAAGTGATGGACAAGGCGTCGCTTGAAAGCAGGAAGAAGTTGCAAAGGGCTCAGACGGAAAGAGAGATTTTGCAGCTACTGGACCACCCGTTTCTGCCTACTTTGTATACACATTTTGAGACTGATAGATTCACCTGTTTAGTGATGGAATATTGTCCAGGGGGTGATCTTCACACCTTGAGGCAACATCAACCTAGAAAGCATTTCTCTGAGTATGCTGCAAGATTTTATGCAGCAGAGGTCCTTTTAGCTCTAGAGTATCTTCACATGCTAGGAGTAATCTATAGAGACTTGAAACCTGAAAACGTACTAGTCCGTGATGATGGCCATATAATGCTCTCCGACTTTGACCTTTCCCTAAGATGCACCGTTTCACCCACCTTAGTACTTGAATCGGACCCATCAAGGTGGTCAGCAAGCGGCTCATTCTGTGTCCAGCCGACTTGCACCGAGCCCTCATCGGTCTGCATCCAACCCTCCTGCTTCATTCCACGCATCTTCCCTCAAAAAAGCAAAAAGAACCAAAAGCCTCGAACTGAGTCCGGTTCTTTCTCAACCACTAGTCTTCCAGAGCTCGTGGCGGAGCCCACTACTGCCAGGTCCATGTCATTTGTCGGGACCCACGAGTACTTAGCCCCTGAAATAATCAAAGGAGAGGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGGATCTTCTTGCATGAACTGTTATACGGCAAGACCCCGTTCAAAGGGTCAGGGAACAGAGCCACACTGTTCAATGTTGTAGGCCAGCAGCTCAAGTTTCCAGACTCACCGGCTGCTAGCTATGCGAGCCGGGACCTGATTCGGGGCTTGCTTGCTAAGGAGCCGCAGAATCGGTTGGGGGTTAAGAGAGGGGCAACTGAGATAAAGCATCACCCTTTCTTTGAAGGCGTGAACTGGGCTTTGATCCGGTGCAGCACGCCACCTGAAGTGCCTGCCAGACCGGTGGACCCCAAGCTTACTCAGAAGATCAGGGCCGTTGATAACACTATCGGCATTGGCAACAATAATGGTAAGAGGCCGGTGGGCCCGGACATGAAACCTGGAGGTACTTATCTGGACTTCGAGTTCTTTTGA 2172 46.64 MTRARDIERIQELKAFPVKVPLEKVLESKKLPEKLCVVAEVSNAHTASGKEEFKLSNARFALVREVSRSDGWDSPDSGSPVSAPSVRTWKGKASLSEPEEERKLEISFKGKNGCSLEAGLDSFSGASHPSEPIDTDPMRTVYVPVDRNKSEAGRLMKSLSRKGPPLGLAKKPTSSILSSVESSVEEEPNDMQKPEKSPLPQDSEERDCVWDASLPPSANVSPHSSIESTDVMSMRMMNSRCSGTYQSEGNDMLTMEGNCDRKQSSRVASLESAKTSISRASDSSGLSDESNWSNITGSANKPHKGNDPRWMAILAIRTRDGMLGMSHFKLLKRLGCGDIGSVYLSELTGTYCCFAMKVMDKASLESRKKLQRAQTEREILQLLDHPFLPTLYTHFETDRFTCLVMEYCPGGDLHTLRQHQPRKHFSEYAARFYAAEVLLALEYLHMLGVIYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTLVLESDPSRWSASGSFCVQPTCTEPSSVCIQPSCFIPRIFPQKSKKNQKPRTESGSFSTTSLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPDSPAASYASRDLIRGLLAKEPQNRLGVKRGATEIKHHPFFEGVNWALIRCSTPPEVPARPVDPKLTQKIRAVDNTIGIGNNNGKRPVGPDMKPGGTYLDFEFF 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2535127 2537788 + Conep15aG0053100.1 Cone15ag0519 453647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0519 723 MobiDBLite consensus disorder prediction 260 301 - -
Cone15ag0519 723 MobiDBLite consensus disorder prediction 67 101 - -
Cone15ag0519 723 MobiDBLite consensus disorder prediction 121 206 - -
Cone15ag0519 723 MobiDBLite consensus disorder prediction 260 304 - -
Cone15ag0519 723 FunFam serine/threonine-protein kinase D6PK-like 412 479 - -
Cone15ag0519 723 PANTHER FLIPPASE KINASE 1-RELATED 196 681 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone15ag0519 723 Pfam Protein kinase domain 329 479 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0519 723 Pfam Protein kinase domain 557 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0519 723 CDD STKc_phototropin_like 326 681 - -
Cone15ag0519 723 MobiDBLite consensus disorder prediction 186 206 - -
Cone15ag0519 723 SMART serkin_6 328 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0519 723 Gene3D Transferase(Phosphotransferase) domain 1 408 477 - -
Cone15ag0519 723 Gene3D Transferase(Phosphotransferase) domain 1 555 677 - -
Cone15ag0519 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag0519 723 SUPERFAMILY Protein kinase-like (PK-like) 309 682 IPR011009 -
Cone15ag0519 723 FunFam serine/threonine-protein kinase D6PK-like 555 678 - -
Cone15ag0519 723 ProSiteProfiles Protein kinase domain profile. 328 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0519 723 Gene3D Phosphorylase Kinase; domain 1 326 407 - -
Cone15ag0519 723 FunFam Serine/threonine-protein kinase D6PK-like 326 411 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0992 Cone-Chr14:8212095 Cone15ag0519 Cone-Chr15:2535127 4.99E-111 dispersed
Cone15ag0519 Cone-Chr15:2535127 Cone5ag1793 Cone-Chr5:12725115 1.13E-213 dispersed
Cone11ag0540 Cone-Chr11:3027379 Cone15ag0519 Cone-Chr15:2535127 3.77e-313 wgd
Cone14ag0490 Cone-Chr14:2403091 Cone15ag0519 Cone-Chr15:2535127 0 wgd
Cone15ag0519 Cone-Chr15:2535127 Cone18ag0964 Cone-Chr18:7023430 8.83e-316 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82142 PF01535 PPR 0.0017 CL0020 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0519 - - - 0.0