Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag0529 | ATGGAGCACCATATCAACATTGAGAATTGTGAAGCTCATCATGAACATGAAGCCTCTTTTGGCTCTTCTTCCACCACCACCACCACTAACACTTCCACTTCTTCCTCCTCTTCCTCCTCTTCCTCCTCCACCTCCCACATGGCAGATTCTCCGGCTCAAAAACGTTCAAGAAAATCTAATCAAGACGTCGACAGTGACAATGATATGGTCAAGGTCACTAATAAGAAGCAAAAGACTGAAGTCAGTGGTAGTGGTAATAGTAATGGTAAAGGTACGAAGCACCTGACATATCGAGGAGTAAGAATGCGAAATTGGGGTAAATGGGTGTCGGAAATTCGTGAACCGAGAAAGAAGTCAAGGATTTGGCTCGGGACTTACCCGACAGCTGAAATGGCAGCTCGAGCTCATGATGTAGCCTCATTAGCCATCAAAGGCAGCTCCGCTTACCTTAATTTCCCCGAACTCGAAAAACATCTCCCCCGCCCGCTCTCCACAGCTCCCAAAGACATACAAGCTGCGGCCTCTGAGGCCGCCGCCTCGACATTTCTAGACACAGTTAGTCAGGGTGAAACGACAGAATTAGCTACAGTTGATCACGAACCGTTGAGCCGAGCCGAGCTTTCTAATTCGGATACGTCACATGAGGAGTCGACAAGTTCTCATTCAAACAATAATATCGATGATCACTATGATGACACATTGTTTGACCTACCGGATCTCCCTCTCGATGGCTCCGATCGAAACAACGATATCGATGGATTGTTCTATTATTCTTCTTGTTCTTCTAATTGGCCACTTTGTGAAGCCGATAGTGGGTTTCGGCTTGAGGAGCCATGTGATCAATGGGATCAATTCTACCACGACAACTTTCCTAGCCAAGTTGCTTCTACCACAAGCTGA | 900 | 46.67 | MEHHINIENCEAHHEHEASFGSSSTTTTTNTSTSSSSSSSSSSTSHMADSPAQKRSRKSNQDVDSDNDMVKVTNKKQKTEVSGSGNSNGKGTKHLTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVASLAIKGSSAYLNFPELEKHLPRPLSTAPKDIQAAASEAAASTFLDTVSQGETTELATVDHEPLSRAELSNSDTSHEESTSSHSNNNIDDHYDDTLFDLPDLPLDGSDRNNDIDGLFYYSSCSSNWPLCEADSGFRLEEPCDQWDQFYHDNFPSQVASTTS | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 2592911 | 2594121 | + | Conep15aG0054100.1 | Cone15ag0529 | 453657 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag0529 | 299 | MobiDBLite | consensus disorder prediction | 19 | 50 | - | - | |
Cone15ag0529 | 299 | MobiDBLite | consensus disorder prediction | 1 | 95 | - | - | |
Cone15ag0529 | 299 | SUPERFAMILY | DNA-binding domain | 96 | 153 | IPR016177 | GO:0003677(InterPro) | |
Cone15ag0529 | 299 | CDD | AP2 | 97 | 155 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0529 | 299 | MobiDBLite | consensus disorder prediction | 76 | 93 | - | - | |
Cone15ag0529 | 299 | MobiDBLite | consensus disorder prediction | 51 | 75 | - | - | |
Cone15ag0529 | 299 | Gene3D | AP2/ERF domain | 96 | 154 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0529 | 299 | Pfam | AP2 domain | 97 | 145 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0529 | 299 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 78 | 244 | IPR051032 | - | |
Cone15ag0529 | 299 | MobiDBLite | consensus disorder prediction | 192 | 227 | - | - | |
Cone15ag0529 | 299 | MobiDBLite | consensus disorder prediction | 206 | 220 | - | - | |
Cone15ag0529 | 299 | FunFam | Ethylene-responsive transcription factor 2 | 95 | 154 | - | - | |
Cone15ag0529 | 299 | ProSiteProfiles | AP2/ERF domain profile. | 96 | 153 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0529 | 299 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cone15ag0529 | 299 | SMART | rav1_2 | 96 | 159 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0529 | 299 | PRINTS | Ethylene responsive element binding protein signature | 97 | 108 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0529 | 299 | PRINTS | Ethylene responsive element binding protein signature | 119 | 135 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0395 | Cone-Chr12:2301242 | Cone15ag0529 | Cone-Chr15:2592911 | 2.98E-47 | dispersed | |
Cone15ag0529 | Cone-Chr15:2592911 | Cone17ag1123 | Cone-Chr17:8317270 | 6.87E-40 | dispersed | |
Cone14ag0506 | Cone-Chr14:2492981 | Cone15ag0529 | Cone-Chr15:2592911 | 3.09E-101 | wgd | |
Cone15ag0529 | Cone-Chr15:2592911 | Cone4ag1392 | Cone-Chr4:11231228 | 3.44E-20 | wgd | |
Cone15ag0529 | Cone-Chr15:2592911 | Cone6ag0657 | Cone-Chr6:3328609 | 3.72E-31 | wgd | |
Cone15ag0529 | Cone-Chr15:2592911 | Cone9ag0662 | Cone-Chr9:3150302 | 2.40E-35 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44855 | PF05633 | BPS1 | 6.00E-06 | CL0133 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag0529 | - | - | - | 0.0 |