Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0567 ATGTACTTCAACGATTCACAGAAGCCATGGCTCCAACAAGAAAGAGGCGAAGAAGAAGAAGAAGAGTACGGAATCTACTTTGACTCCGGTCCGATTCCACAACAATCATGCTCTCAAGGCCACCGATCCTCTCTCTGCCTTCAAACGCAACAAGGCGGCGTGATCTGCCTCCTCTGCCTTTCCAATCTCATCTCCAACCCCCACTCTCCGACTCTACACGTCTCCTACGCCCTCTCTCAGCTCTCTCACGCCCTCTCTCAGCCTCATTTCCTCCACTCCTTCCTCACCTTCCACTCTCACTTCCTCGTCTCTCCTCTTGTCACTGCGCTTTTCTCCTTCGATGACGAGCCAATTGCTCGCCAGCTCTTCGATCTAATTTCTGGAATCTGCGAAGCTACTGATCGTGAAGCTGATGCTTCTCTTTGTGGTGAATTCATCGCTAGGGTTTCTGATCGCCTCTCCTCTGGAGCTTTGGCTTGGAGTCGGCGTCAGGTGTATCCGCTTCACTGCTTAGGACTTCTTCTAAATTGTCAGACAAGGGATCCCTATGATAACATCAAGAACATTGATGGACTTGTCTCAAATCTTGTTGCTGGTTTTCGATTGCCAAGTGAGGAGATACGGGGAGAAGTTCTATTTGTTCTTTATAAACTGTCTGTAATTCAATATACATCTAATAGAAGCAATGGAGTTGATGTTCTGTTTAATTTTGGTCCTCAACTCGTGCACCTGTCTGTGGAGGCCCTCATGAAGACCCAAAGTGATGATATGAGGTTAAATTGTGTAGCGCTTCTAATAATTTTGACTCAAAGAGGGTTTCTGGGAAATGCATGTGCAAATGACACAATGATCAGAGATGATAGCACTGTCGAGCGCCCTTTGAATATCTTATTTGCTGAGGCCATCAAAGGTCCACTGCTTTCATCAGAAAGACAAGTTCAAGTTAGCACACTGGATCTAATAGTCCATTATTTGTCCTGGGAAGGCATTTCAATCAATGAGATTCAATTACTGGTTGAAGAAAACATTGTGGATTATGTATTTGAAATAGTAAGGCTGTCAGAAGGTAATGATCCAGTGGTAAAGTCATGCCTTCTGGCTCTTGATCTCTTATCCAGAGCTGAACAGTCTTTCAATCAGAGGCTTGTAGTTGGATTTTCCACTCTGATTCCAGTGCTGCGTTATGTAGCTCAAGTCCCTTTGCATCCAGTTCAAACTCAGACACTAAAGCTCATTTGGAAATGCATTTCTGAATTTCCTGGAGGCGTATCAACCTCTCATATCAAGGAACTAATTCTGGTTTTGGTGGAATTGTTTCAAATAGATGCAGATAGAGAGATGAGTATGCTTCCAGATACAATCACACTATGCTGCTCCATTCTTGTTGCAATTATAAAATCTCCATCTTCCCATGGGGTGCTAAACCTAGTTAGATCAGTTCAAGATGTTTCCAAACATGCCATATTATCTTGCCTCAGCATCTTTGAGAAACATCCAACTCAGCTTTTGGATTCCTTGTATCTCCTAAAAGAGGCATATGTATACAGTCATGATGAGAATTCCGCAGACAACTTTAGCAAAGAGGAACTAAGAAATTGTATTCTAGATATATGTGTAACACATTTATTACCTTGGTTCTTAGAAACCATCAACGAAATGGAAGAGGAACTCGTTGTGGGGGTTATGGAAACTTTTCACTCAATACTGCTTCAAGATTCTGATATCACGGCCATAGAATTTGCAAATACTCTGGTCTCATCTTCTTGGTTCAGTTTCTCGTTTGGATGTCTAGGCTTATTTCCTACAGAAAAGATTAAATGGAGAGTGTATCTGATGCTTAGTTCTCTGGTGGATGCAGTCCTAGGAAATAGTTCGGGCCACTCCATTAAAGATGCTATTTCACTTATGCCAGTTGATCCTATTGATTTACTGTTTCTGCTTGGGCAGAAGAGTTCCCAAAATTTGGAGTTGTCTTCTTGTCAGTCTGCGATTTTGCTCATGTTATATGCTAGTTCCTTAGTTGATGAAAGGCTTGCTGATGAAAAGTTGGTTTTGGCCTCTCTAGAACATTACATTCTTGTCAACCGTTCTGATTTGCTCTATGGGTCCCCTGCTCCATCGGAAGTAGCGCGATTGGTCCATCTTTATGGTCTGTATAGGTCCAACTGCCATATCCCCTACAGCTCAGAAGCTGAAGAGATTCTATTCCAACTAACAACTGTAAAAAAATGGGATTTGCCTTCATCCAGAATTCACTCAGCATCATTGAAATGGCTGTTTCAACAAGAGAAAATCACAAAGCCATTATGCCATCAAATTTTGAATTTCTGCCGTACAAGCACATCAAATGCTATGGCCAACTCTCTTCACACCCAATTTATAGATGCACAGGCAATTGGAGAGTTAGTTGCCTCGGGAGATAACTATGGAGCAATGATTTTAGTTGGCTTGTTGAAACAACTTGTACAGGAAGGTGCGGAGCCCGACATAGTTTCATTATTGAATTTAATAGCTACCATCAGTAATATATTTCCGGCTGCTGCATTACAATTATGTATACATGGCATAGGAAATGCAATTCAAATTCTGTATAACAATTCAAGTCATACATACTCCAGACAAACATATACAGCGGCTACAGTACTGGTTTTCAGTATTTTACATTATGCTCCCTCTGAAATACTTTCTGATGATGAAGGTTGGCTTTCAGTTACTGTGAAGCTACTTGACTGCTTTATACCCAAAGATGCTGGAGATAGATGCACTCCTGACAGTCTTTTAGTAATTTCTGTTCTTTCTTTAATTTCGCACCATTCAATCAGGGGAACACTTGTAAAAGCTTCAAAAACCATACACTTCAATACTTCTCTGGTCTCTATGATTAATTGTACAATCCATGAGGCCTGTTCAAAGGGACCTGCTTTATTCGAAGATGATGAGGAAACTAGCACAGGAGAAACCTTGATGTTTGTTCTTTTGCTTAGTTACTTCTCAATGAGAAGCTTGCCCGCTATTCTACCTGGTGTTGTGGATTGGCAAAACTTCCTTGATCAACCTAATGGTACAAAGTTGCCCCTAATTAGCATCCACTGCCATGATTTATGCAGACTACTGCATGTCGGTTCTTCTCCAGTGAAGCTTGTCACCTCATACTGCCTACTAGAGCTCTTTACCAGATTATCAGACCAGAGAACTTGTAAGAATGAGGAGCTAAAATCTACCAGAAATTATCTTATGTCTATGATGGCTATATTGGAAGGCTTTGTTTATTACAGTGATCCTCGAGTGGCTCAAAACTGTGGCCTCTGCGTCTCAATAATTTTTGGATGGCAAAAGCTAGATATGCAAGACGCAAGATTTATCAAAAAGAATAAGTGGTGTAGGATCATTGTAGAAGAACTGGCAGTTTCCTTGGCGGTTCCATGTTTAACATCTTCATTCATTAACTATCAGCCGGCAATTCTGGTAGCTGTAGCATTGTTAAAACTGCAGAAGGATTTTGGTTGGATGAGATTGGTGTTTAATGATGCCTGCATTTCCGGAATGATTGAAAATGTTGCAGCTAATAATTTGAACGTAGAGATGGTATCTTTATTTAAGGAGCTGTTGAATTGTGAGTTCTTGAAAGCTGATCAAATTGCTTGTCTCAATCGGGTACTGCAGGCATGCAGAAAGCAACTGTACTCTGAGAAGGCTCGAGATGATCAATCTGATGAAATGGTCGGGAACGCTGTTGCCTCTTTTGACGATTTGGGAGAAGTTTGTGAGTATCTCATTCACTTGATGATATCAGACTCAAATTTAGACATGGATTCTAGAGGATTACACACTGGAAACAAGAAATTGTTAGAAGAAATAGAGTTGTTTTTCACGACTTCATCTATACAAGATGATGGATAG 3900 41.05 MYFNDSQKPWLQQERGEEEEEEYGIYFDSGPIPQQSCSQGHRSSLCLQTQQGGVICLLCLSNLISNPHSPTLHVSYALSQLSHALSQPHFLHSFLTFHSHFLVSPLVTALFSFDDEPIARQLFDLISGICEATDREADASLCGEFIARVSDRLSSGALAWSRRQVYPLHCLGLLLNCQTRDPYDNIKNIDGLVSNLVAGFRLPSEEIRGEVLFVLYKLSVIQYTSNRSNGVDVLFNFGPQLVHLSVEALMKTQSDDMRLNCVALLIILTQRGFLGNACANDTMIRDDSTVERPLNILFAEAIKGPLLSSERQVQVSTLDLIVHYLSWEGISINEIQLLVEENIVDYVFEIVRLSEGNDPVVKSCLLALDLLSRAEQSFNQRLVVGFSTLIPVLRYVAQVPLHPVQTQTLKLIWKCISEFPGGVSTSHIKELILVLVELFQIDADREMSMLPDTITLCCSILVAIIKSPSSHGVLNLVRSVQDVSKHAILSCLSIFEKHPTQLLDSLYLLKEAYVYSHDENSADNFSKEELRNCILDICVTHLLPWFLETINEMEEELVVGVMETFHSILLQDSDITAIEFANTLVSSSWFSFSFGCLGLFPTEKIKWRVYLMLSSLVDAVLGNSSGHSIKDAISLMPVDPIDLLFLLGQKSSQNLELSSCQSAILLMLYASSLVDERLADEKLVLASLEHYILVNRSDLLYGSPAPSEVARLVHLYGLYRSNCHIPYSSEAEEILFQLTTVKKWDLPSSRIHSASLKWLFQQEKITKPLCHQILNFCRTSTSNAMANSLHTQFIDAQAIGELVASGDNYGAMILVGLLKQLVQEGAEPDIVSLLNLIATISNIFPAAALQLCIHGIGNAIQILYNNSSHTYSRQTYTAATVLVFSILHYAPSEILSDDEGWLSVTVKLLDCFIPKDAGDRCTPDSLLVISVLSLISHHSIRGTLVKASKTIHFNTSLVSMINCTIHEACSKGPALFEDDEETSTGETLMFVLLLSYFSMRSLPAILPGVVDWQNFLDQPNGTKLPLISIHCHDLCRLLHVGSSPVKLVTSYCLLELFTRLSDQRTCKNEELKSTRNYLMSMMAILEGFVYYSDPRVAQNCGLCVSIIFGWQKLDMQDARFIKKNKWCRIIVEELAVSLAVPCLTSSFINYQPAILVAVALLKLQKDFGWMRLVFNDACISGMIENVAANNLNVEMVSLFKELLNCEFLKADQIACLNRVLQACRKQLYSEKARDDQSDEMVGNAVASFDDLGEVCEYLIHLMISDSNLDMDSRGLHTGNKKLLEEIELFFTTSSIQDDG 1299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2845897 2851101 - Conep15aG0057900.1 Cone15ag0567 453695

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0567 1299 PANTHER PROTEIN PRD1 32 1294 IPR044968 GO:0042138(PANTHER)|GO:0042138(InterPro)
Cone15ag0567 1299 ProSiteProfiles Aspartyl protease, retroviral-type family profile. 818 899 IPR001995 GO:0004190(InterPro)|GO:0006508(InterPro)
Cone15ag0567 1299 SUPERFAMILY ARM repeat 56 605 IPR016024 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0567 K25318 - - csv:101210344 1450.65
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0546 Cone-Chr14:2713471 Cone15ag0567 Cone-Chr15:2845897 4.26E-137 transposed
Cone14ag0545 Cone-Chr14:2711620 Cone15ag0567 Cone-Chr15:2845897 1.07E-181 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1026 . . Bda03g01073 . Bpe04g01002 . Bma04g00987 . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag0546 Cone15ag0567 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011149 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 31