Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0614 ATGCTCAAGACTATAGAGAGGTATCAGAAGTGCAACTACGGACCAGCCGAGCCTCAAGTTTCCACAAGAGAGACCTTGGAATTGAGCAGTCAGCAGGAGTATTTGAAGCTCAAAGCACATTACGAAGCGCTAAAACGATCGGAAAGGAACATGTTAGGAGAAGATCTTGGACCGTTGACTACTAAGGACCTTGAGTCACTTGAAAGGCAGCTTGATGCCTCACTCAAGCAAGTCAGATCAATCCGGACCCAATATATGCTGGATCAACTGACTGAACTTCAACAGAAGGAAAACTTGCTTAGTGAAGCCAATAACACCCTCAGGCAAAGGTTAATGGAAGGGTATGAATTAAGTTCACTCCATTTGAATCCAAGTGGTGAGGACTTTGCAGGATATGGTCGACACCATGCTCAACTATTTCATGCAGATCATGGATTTGTCCATCCCTTGGAATGTGAACCCACATTGCAGATTGGATATCAAACCGATCCCATGGCAGTGGTTAGTACTTCTGCTGCTGCTGCTGCTGCTGGTCCTAGCATGAGTAATTATCTACCAGGATCATGGTTACCTTGA 576 45.14 MLKTIERYQKCNYGPAEPQVSTRETLELSSQQEYLKLKAHYEALKRSERNMLGEDLGPLTTKDLESLERQLDASLKQVRSIRTQYMLDQLTELQQKENLLSEANNTLRQRLMEGYELSSLHLNPSGEDFAGYGRHHAQLFHADHGFVHPLECEPTLQIGYQTDPMAVVSTSAAAAAAGPSMSNYLPGSWLP 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3192831 3194748 + Conep15aG0062700.1 Cone15ag0614 453742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0614 191 Pfam K-box region 29 111 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cone15ag0614 191 Coils Coil 64 84 - -
Cone15ag0614 191 ProSiteProfiles K-box domain profile. 27 117 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cone15ag0614 191 Coils Coil 86 113 - -
Cone15ag0614 191 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 131 IPR050142 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0614 Cone-Chr15:3192831 Cone2ag0486 Cone-Chr2:2633642 1.71E-40 dispersed
Cone14ag0608 Cone-Chr14:3029221 Cone15ag0614 Cone-Chr15:3192831 2.14E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0614 - - - 0.0