Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0701 ATGGAAGAGACTTTTGTGCCTCTCCAAGGAATCAAGAATGACCTTCAAGGAAGGTTGAAATGTTACAAGCAAGATTGGACTGGAGGAATCAAAACCGGCTTCAGGATATTGGCTCCGACTACATACATATTTTTTGCTTCAGCAATTCCTGTCATTTCATTTGGTGAACAATTGGATAGAGACACAGATGGGGTTCTTACTGCTGTTCAAACATTAGCTTCTACTGCACTATGTGGGATTATACACTCAATCATAGGGGGCCAACCTTTGCTCATTCTAGGAGTTGCTGAGCCTACTGTCATTATGTACAACTTTATGTTCAATTTTGCCAAAGATAGACCCGACTTGGGATCCAAGCTCTTTCTAGCATGGACCGGATGGGTATGTGTGTGGACTGCCATATTGCTTTTTCTGTTGGCGATATTGGGTGCTTGCTCCATTATCAATAGGTTTACTCGTCTTGCCGGGGAGTTGTTTGGTCTTCTCATTGCAATGCTTTTCATGCAGGAAGCTATTAAAGGACTAGTGGACGAGTTTCATGTACCCAAAAGAGAAAATCCAATGTCAACCGAGTTTCAACCTTCATGGAGGTTTGCAAATGGAATGTTTGCTTTGGTTCTATCATTTGGTCTGCTGCTTACTGCCTTAAAAAGTCGAAAAGCAAGGTCTTGGAGATATGGATCTGGTTCGCTACGAGGTTTCATAGCAGATTATGGTGTGCCCTTGATGGTTCTGATCTGGTCAGCTGTTTCCTATCTACCATCTGGAAATGTTCCTAACGGGATTCCAAGACGCCTCTTCAGTCCAAATCCGTGGTTAAAGGGCGCATATGAGAATTGGACTGTCATTAAGGACATGTTACATGTACCGGTTCTCTACATAATAGGAGCTTTCATTCCGGCAACAATGATTGCTGTGCTTTACTACTTTGACCACAGTGTAGCCTCTCAGCTTGCTCAGCAGAAGGACTTCAACCTGAGAAAACCACCTTCTTTCCATTATGACTTGCTTCTTTTGGGATTCATGGTCATTTTGTGCGGTCTATTAGGGATCCCTCCATCTAATGGTGTGATTCCACAATCTCCCATGCACACTAGAAGCTTGGCTACACTTAAGCACCAGTTGCTTCGTCGGCGGCTTGTGGCAACTGCCCGAAAATCAATGGCGCAAAATGCAAGCTTAGGACAAGTGTATAGAAGCATGCAAGAATCTTATCAACAAATGCAGACCCCTTTGATTTACCAAGAACCTTCTGCTCATGGATTAAAGGAGTTGAAAGACTCAGCGATTCAAACAGCTTCAACTTTTGGAAATATCGACAATGGCCCTGTCGATGAGACGGCGTTCGATATAGAGAAAGAGATCGACAATTTGTTGCCTGTTGAGGTGAAAGAACAACGTCTTAGTAACCTTCTTCAAGCTACAATGGCAGGAGCATGTATTGGAACCATGCCTTTCCTAAAAAGAATCCCGACCTCAGTTCTTTGGGGCTATTTCGCATTCATGGCCATTGAGAGCTTGCCTGGAAACCAGTTTTGGGAACGTATTTTATTACTATTCACCGCTCCAGGCCGAAGATATAAAGTGCTTGAGCAGTACCATGCAACATTTGTAGAATCCGTACCCTTCAAGACTATTGCGGTGTTTACAGTTTTCCAAACAGTTTACTTGCTGATTTGTTTCGGGATTACGTGGGTTCCAATTGCTGGAGTTTTGTTCCCATTGATGATCATGCTTTTGGTTCCCTTAAGACAATACATGTTGCCCAAGTTCTTTAAAGCCGCCCATCTCCAAGACTTAGATGCTGCTGAATATGAAGAGACACCCGCCTTAACATTCAACCTCATATCAGAGGGAGAGATGAACAGTAGCGCTTCATTTGTGGACGATGGAGAGATTTTGGACGGGATGGTTACGAGGAGCCGTGGGGAGATCAGGCGAATCTGCAGTTTGAAGTTACAGAGCTCCACATCATCACCCTGCCGGGAAACGAGAAAAGAAAGTCCCCGCGTAACTGAACTGAGAAGGGAAAGTCCTCGGCTTGTTTCTAGAAGTGCGTCGTTTTGTAGTCCAAGAGCAAGAGAATCAAGAGCGTCTAATTGA 2103 44.03 MEETFVPLQGIKNDLQGRLKCYKQDWTGGIKTGFRILAPTTYIFFASAIPVISFGEQLDRDTDGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYNFMFNFAKDRPDLGSKLFLAWTGWVCVWTAILLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQEAIKGLVDEFHVPKRENPMSTEFQPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGSLRGFIADYGVPLMVLIWSAVSYLPSGNVPNGIPRRLFSPNPWLKGAYENWTVIKDMLHVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKDFNLRKPPSFHYDLLLLGFMVILCGLLGIPPSNGVIPQSPMHTRSLATLKHQLLRRRLVATARKSMAQNASLGQVYRSMQESYQQMQTPLIYQEPSAHGLKELKDSAIQTASTFGNIDNGPVDETAFDIEKEIDNLLPVEVKEQRLSNLLQATMAGACIGTMPFLKRIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPGRRYKVLEQYHATFVESVPFKTIAVFTVFQTVYLLICFGITWVPIAGVLFPLMIMLLVPLRQYMLPKFFKAAHLQDLDAAEYEETPALTFNLISEGEMNSSASFVDDGEILDGMVTRSRGEIRRICSLKLQSSTSSPCRETRKESPRVTELRRESPRLVSRSASFCSPRARESRASN 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3815406 3819429 + Conep15aG0071500.1 Cone15ag0701 453829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0701 700 Pfam HCO3- transporter integral membrane domain 8 181 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone15ag0701 700 Pfam HCO3- transporter integral membrane domain 461 603 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone15ag0701 700 Pfam HCO3- transporter integral membrane domain 200 372 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone15ag0701 700 MobiDBLite consensus disorder prediction 659 700 - -
Cone15ag0701 700 Gene3D Helical hairpin bin 18 60 - -
Cone15ag0701 700 PANTHER ANION EXCHANGE PROTEIN 5 640 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cone15ag0701 700 MobiDBLite consensus disorder prediction 663 680 - -
Cone15ag0701 700 MobiDBLite consensus disorder prediction 683 700 - -
Cone15ag0701 700 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0701 Cone-Chr15:3815406 Cone18ag0762 Cone-Chr18:4291387 0 dispersed
Cone14ag0688 Cone-Chr14:3566315 Cone15ag0701 Cone-Chr15:3815406 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0701 K24194 - mdm:103416235 1156.74