Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0706 ATGGACTCGGCTTCAATGGCTCCGGTAAACCTCACCGATCATTCTGATACTACAAATGGCGAAGCTATCTTAACGACTGAATCGTCCAAAGAAGAGTCTTCAGTTTCAGATTCAGTTTCCGAGTCAGAAACAAACAAAATTGAATTAAAATTGCGGGTAGAGACGATGTGGGAGCAAATGAATACAGGGTTAACTAATAAGCCATTAAAAAAATCCTTTCCGAGAAAGCCTTGCTCAACTGCAGATAAGAATGCAAAGAAGAGGTCCAATAATTGGATGTCATATCTTGGTCTGGCACCAAAGAACACCAAACCTCAAAGGCAAGATGAGTCAAGAAAAGGACCAACTGTTCTGCCGGATAACACTTGTGAAGAGGCCAAGAGGTTGGCTGCTGCTGCTCTCTCTGCAGTTAGGGATTCCGCAGCTCTTGCTACTAGTAGAGGGAAAGTAGAGATTACAGAGGTTCGAGACTTTGCGGGTCAAGAAATTGAAGTTAAGAAGCTTGTTGATATTGGTTCAAAGGAAGCATCTGAAAAGACAAAAGCTTCTGCCCCTTCTGCGGTTGATGCGGTCCTTGAACAAATTAAGAAGAAACAAAAGCTTAGTGTCCTTGACAAGACAAAGAAGGATTGGGGAGAGTTTAAGGACGAAAATAAGGGCATGGAAGAGGAACTGGATGCTTACAAGAAGAGCTCAAACCAGTACCTGGATAGAGTTTCCTTCTTGCAGCGAACGGATTTTAGAGAGTTCGAACGGGAGAGAGATGCACGCCTTGCTTTGCAGACCAGGAGGAAGCCTGATATGAGTGAAGATTGA 816 43.63 MDSASMAPVNLTDHSDTTNGEAILTTESSKEESSVSDSVSESETNKIELKLRVETMWEQMNTGLTNKPLKKSFPRKPCSTADKNAKKRSNNWMSYLGLAPKNTKPQRQDESRKGPTVLPDNTCEEAKRLAAAALSAVRDSAALATSRGKVEITEVRDFAGQEIEVKKLVDIGSKEASEKTKASAPSAVDAVLEQIKKKQKLSVLDKTKKDWGEFKDENKGMEEELDAYKKSSNQYLDRVSFLQRTDFREFERERDARLALQTRRKPDMSED 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3830849 3833016 - Conep15aG0072000.1 Cone15ag0706 453834

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0706 271 MobiDBLite consensus disorder prediction 1 42 - -
Cone15ag0706 271 ProSiteProfiles Bucentaur C-terminal (BCNT-C) domain profile. 182 263 IPR011421 -
Cone15ag0706 271 PANTHER CRANIOFACIAL DEVELOPMENT PROTEIN 1 14 270 IPR027124 -
Cone15ag0706 271 MobiDBLite consensus disorder prediction 1 45 - -
Cone15ag0706 271 Pfam Bucentaur or craniofacial development 186 258 IPR011421 -
Cone15ag0706 271 Coils Coil 218 238 - -
Cone15ag0706 271 MobiDBLite consensus disorder prediction 62 120 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0706 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0692 Cone-Chr14:3643764 Cone15ag0706 Cone-Chr15:3830849 2.76E-152 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g217 Blo01g00027 . . . . . . Bma05g00989 . . . . . . . . . . . . . . . . Cla06g00404 Cam06g0426 Cec06g0434 Cco06g0433 Clacu06g0412 Cmu06g0412 Cre06g1192 Cone14ag0692 Cone15ag0706 . . . . . . . . . . Bpe05g00796 . . . . . . . . . . Cpe12g00342 . Bhi12g01968 . . . . . Lcy12g0888 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007922 1 3 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 0 1 1 1 2 0 1 36