Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag0723 | ATGGCGTCATATCTGGTTTCCAATCTCGTAGCGAATCCTGACCGTTCGTGCGATTCTACCAGAAGGAAAAAGAAGAAGAAAATTCAGCCGCAGAAAGATGATCATCCAAATCAGAATAATCAGCATAACAGATGGAAATCTGAAGCTCAACAGCAAATATATTCGTCCAAGCTAATCCGAGCCTTGAGCCAAGTCAGGATCGGCTCCACTTCTTCCGCATCCAGCTCCTCGGCTTTGGCTCCTAACGAGGCACCACGCCGTGGCCGAGCCGTTCGTGAGGCGGCTGATAGAGTCCTAGCTGTGGCTGCGAAGGGGATAACTAGGTGGAGCCGAGCGATCTTGACTAATCGGCTTAAGCTTAAGTTTATGAAGCATAAGCGGCAGAGAGTTACAGCAACCGGGAATTTTCGGTCCAAGAAGCCGAGAGTGGCCGTTCTTCGGTTGAAAGGCAAGTCTCTACCGGCAGTGCAGAGGAAAGTTCGTGTCCTCGGAAGGTTGGTTCCCGGTTGCCGGAAACAACCGCTGCCGGTGATTCTAGACGAAGCTACTGATTATATAGCCGCGCTTGAGATGCAGATTCGAGCCATGAGTGCCGTCGCTGAGTTCCTCTCTGCTGCCAGCTCTAGCTCCGCCTCCGCCCCGCCCAGTTGA | 651 | 52.53 | MASYLVSNLVANPDRSCDSTRRKKKKKIQPQKDDHPNQNNQHNRWKSEAQQQIYSSKLIRALSQVRIGSTSSASSSSALAPNEAPRRGRAVREAADRVLAVAAKGITRWSRAILTNRLKLKFMKHKRQRVTATGNFRSKKPRVAVLRLKGKSLPAVQRKVRVLGRLVPGCRKQPLPVILDEATDYIAALEMQIRAMSAVAEFLSAASSSSASAPPS | 216 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 4086223 | 4087346 | - | Conep15aG0073700.1 | Cone15ag0723 | 453851 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag0723 | 216 | CDD | bHLH_AtIBH1_like | 145 | 198 | IPR044549 | GO:0006355(InterPro) | |
| Cone15ag0723 | 216 | MobiDBLite | consensus disorder prediction | 12 | 49 | - | - | |
| Cone15ag0723 | 216 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 42 | 203 | IPR044660 | GO:0006355(InterPro) | |
| Cone15ag0723 | 216 | MobiDBLite | consensus disorder prediction | 70 | 89 | - | - | |
| Cone15ag0723 | 216 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 159 | 206 | IPR036638 | GO:0046983(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0823 | Cone-Chr10:4186969 | Cone15ag0723 | Cone-Chr15:4086223 | 1.99E-40 | dispersed | |
| Cone1ag1557 | Cone-Chr1:57413133 | Cone15ag0723 | Cone-Chr15:4086223 | 1.39E-44 | wgd | |
| Cone14ag0710 | Cone-Chr14:3874108 | Cone15ag0723 | Cone-Chr15:4086223 | 8.13E-108 | wgd | |
| Cone15ag0723 | Cone-Chr15:4086223 | Cone3ag0849 | Cone-Chr3:4369602 | 1.46E-40 | wgd | |
| Cone15ag0723 | Cone-Chr15:4086223 | Cone4ag0100 | Cone-Chr4:482564 | 2.09E-65 | wgd | |
| Cone15ag0723 | Cone-Chr15:4086223 | Cone5ag0081 | Cone-Chr5:396828 | 1.55E-41 | wgd | |
| Cone15ag0723 | Cone-Chr15:4086223 | Cone7ag0095 | Cone-Chr7:417925 | 1.47E-72 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag0723 | - | - | - | 0.0 |