Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0726 ATGCTCGAGGCATTCATGAATCTTCTCTCTGTTTGTTGGAAGCCGTTCGGGCATGGCGGTGAGGTAAACTCGTCTTCTTCTGTCGGAGTTATCGGAGCCAATTACGGTGGTGGTTGTGCTGGCGGCGGCCGGGGAGACGGTTTGTTTTGGTGCCGTGATATCGGAAAGTATGCTTCCGGTGACTTCTCCATGGCGGTTGTGCAGGCGAACCAGGTGCTTGAGGACCATAGCCAGATCGAATCTGGATCATTTGGCACCTTTGTTGGCGTCTATGATGGCCATGGTGGCTCAGAGGCTGCTCGATATGTTTGCGATAACTTGTTCAGGCTTTTCAAAGAATTATCAGCTGAGGCCCAGGGTTTTGTGACACCCAGTACAATTCAAAAAGCCTTTCACCAGACAGAAGAAGGGTTCACTGCCCTAGTATCGGAATTGTGGAGCACTCGGCCCCAAATAGCAACTGTTGGATCTTGCTGTTTAGTTGGAGTGATCTGTCAGCAAACCCTCTACATTGCAAACCTTGGAGATTCTCGAGTAGTATTAGGCAAGAAAGTTGGAAATACTGGTGAGATTGCTGCTATTCAGTTATCAACGGAACATAATGCAAATAGTGAAGCTGTTAGGCAGGAGCTAAAAGAAGAGCACCCAAATGATCCTCAAGTTGTTGTCCAAAGGCATGGTGTTTGGAGAGTTAAAGGCATTATACAGGTTTCTAGATCTATAGGCGATGTCTATCTGAAACATGCTCAGTATAATACTGAACGGATTAACAGCAAATTCAGAATTTCTGAACCTATGGATATGCCTATCTTGACTGCCATTCCAACTATTCTTTCTCATCCTCTCAATCCAAATGATTCTTTCCTTATTTTTGCATCTGATGGTCTATGGGAACACTTGAGTAACGAGAAGGCAGTGGATATTGTCCAGAATAATCCACATGCAAAAAATTAG 954 45.07 MLEAFMNLLSVCWKPFGHGGEVNSSSSVGVIGANYGGGCAGGGRGDGLFWCRDIGKYASGDFSMAVVQANQVLEDHSQIESGSFGTFVGVYDGHGGSEAARYVCDNLFRLFKELSAEAQGFVTPSTIQKAFHQTEEGFTALVSELWSTRPQIATVGSCCLVGVICQQTLYIANLGDSRVVLGKKVGNTGEIAAIQLSTEHNANSEAVRQELKEEHPNDPQVVVQRHGVWRVKGIIQVSRSIGDVYLKHAQYNTERINSKFRISEPMDMPILTAIPTILSHPLNPNDSFLIFASDGLWEHLSNEKAVDIVQNNPHAKN 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4129871 4133803 - Conep15aG0074100.1 Cone15ag0726 453854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0726 317 Gene3D - 54 317 IPR036457 -
Cone15ag0726 317 PANTHER PROTEIN PHOSPHATASE 60 315 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone15ag0726 317 SUPERFAMILY PP2C-like 72 311 IPR036457 -
Cone15ag0726 317 Pfam Protein phosphatase 2C 85 314 IPR001932 -
Cone15ag0726 317 ProSiteProfiles PPM-type phosphatase domain profile. 61 317 IPR001932 -
Cone15ag0726 317 CDD PP2Cc 62 317 IPR001932 -
Cone15ag0726 317 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169(InterPro)
Cone15ag0726 317 SMART PP2C_4 48 313 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0726 Cone-Chr15:4129871 Cone8ag0870 Cone-Chr8:8576582 1.07E-112 dispersed
Cone14ag0714 Cone-Chr14:3900353 Cone15ag0726 Cone-Chr15:4129871 1.12E-202 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0726 K01102 - mdm:103434226 470.314