Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0731 ATGGCGTTTTGGTGGCCTCTGTTCGTTCTAGGATTCGCTTACGCGATCTGTAGGTTCCTCTTCATGCTCATTCCTCCCAATGTGCCTTCCATCGAAGTCGATGCATCCGACGTTTTGGATGATGGGAATCAGGCTCAGGAGAACGGCTTCATATATATACCTCCAAGGGGAAGGACCCAACAGTCAGACAAGAAAGTTCAATGCTACGAGCCTGCAACCATGAAGTACTTGGGATATTTCCCTGCCTTGTCGCCTACTGAGGTTAAGGAGCATGTAGCACAAGCAAGGAAGGCACAGAAAACATGGGCCATGAGTAGCTTCAAGCAAAGACGCCAGTTTCTGCGGATACTTCTGAAGTATATAGTTGAACATCAAGAACTTATATGCGAAGTCTCCTCACGTGATACTGGAAAGACAATGGTAGATGCCTCTTTGGGTGAAATAATGACAACATGTGAGAAGATCACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTAAAACCCGAGTACAGATCTTCAGGAAGATCAATGCTTCACAAGAGATCAAAAGTGGAGTTTCACCCCCTTGGTGTTATCGGTGCCATAGTTTCATGGAACTACCCATTCCATAACATTTTCAATCCAATGCTAGCAGCAGTCTTTTCAGGCAACAGTGTCGTAATTAAGGTTTCCGAACATGCAAGTTGGTCAGGTTGTTTCTACTTTCGAATTATTCAAGCTGCGCTTGCTGCTGTTGGAGCACCGGAAAACGTGGTTGATATTATAACAGGGTTTGCTGAAACGGGAGAAGCATTGGTTTCCTCAGTCGACAAAATCATATTTGTTGGATCACCTGGTGTTGGTAAGATGATAATGTCAACTGCCTCTGAGACTCTTATACCAGTTACACTTGAGCTTGGTGGAAAGGATGCATTTATTGTATGCGACGATGCTGATGTGGATAATGTTGCACAAGTTGCTGCCAGGGGAGCTCTTCAATCAAGTGGACAGAACTGTGCTGGGGCTGAGAGATTTTATGTCCACCAGAACATATATCCTTCATTTGTTAATCGAATCACCAAAATTATAAAGTCTGTGACAGCTGGTCCACCACTTGCTGGGAGATATGATATGGGAGCCATATGCATGCTAGAGCATTCGGAAAAGCTTCAAGGCCTTCTAAATGATGCCTTAGATAAAGGAGCAGAGATTGTTGCTCGTGGAAGTTTTGGACATTTAGCTGAAGATGCTGTTGATCAGTATTTCCCCCCTACCGTGATTGTAAATGTGAACCACACGATGAAGTTGATGCAGGAGGAGACATTTGGACCAATAATGCCCATAATGAAATTTAGCACTGATGATGAAGCAGTCAAGCTTGCAAATGACTCAAAGTATGGGCTTGGCTGTGCTGTTTTTTCCGGCAATCAGCAAAGAGCAAAGGCTATAGCTTCACAGATACACTGTGGGGTTGCTGCAATTAATGACTTTGCATCAAATTACATGTGTCAGTCCTTGCCATTTGGTGGAGTGAAGGACAGTGGATTTGGCCGATTTGCGGGTATTGAAGGATTGCGAGCTTGCTGTCTTGTAAAATCAGTCGTTGAGGATAGATGGTGGCCTTTCATCAAAACAAAGATACCTAAGATTATTCAGTATCCTGTTGCGGAGAATGGATTCGAGTTTCAGGAGTCTCTTGTCCAAGCTCTATATGGCCTGAATATATGGGACCGATTGCGAGCATTTGTTGATGTGTTGAAACTCCGTTCGGAACATAATGATCCTGCTGGCAATAATGCCGCCGCTGCTCGTAAGACCGATTGA 1803 44.32 MAFWWPLFVLGFAYAICRFLFMLIPPNVPSIEVDASDVLDDGNQAQENGFIYIPPRGRTQQSDKKVQCYEPATMKYLGYFPALSPTEVKEHVAQARKAQKTWAMSSFKQRRQFLRILLKYIVEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMLHKRSKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSVVIKVSEHASWSGCFYFRIIQAALAAVGAPENVVDIITGFAETGEALVSSVDKIIFVGSPGVGKMIMSTASETLIPVTLELGGKDAFIVCDDADVDNVAQVAARGALQSSGQNCAGAERFYVHQNIYPSFVNRITKIIKSVTAGPPLAGRYDMGAICMLEHSEKLQGLLNDALDKGAEIVARGSFGHLAEDAVDQYFPPTVIVNVNHTMKLMQEETFGPIMPIMKFSTDDEAVKLANDSKYGLGCAVFSGNQQRAKAIASQIHCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRWWPFIKTKIPKIIQYPVAENGFEFQESLVQALYGLNIWDRLRAFVDVLKLRSEHNDPAGNNAAAARKTD 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4201522 4207836 - Conep15aG0074600.1 Cone15ag0731 453859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0731 600 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620(InterPro)
Cone15ag0731 600 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491(InterPro)
Cone15ag0731 600 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491(InterPro)
Cone15ag0731 600 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491(InterPro)
Cone15ag0731 600 CDD ALDH_F15-22 69 531 - -
Cone15ag0731 600 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 528 - -
Cone15ag0731 600 SUPERFAMILY ALDH-like 56 529 IPR016161 GO:0016491(InterPro)
Cone15ag0731 600 FunFam aldehyde dehydrogenase 22A1 65 325 - -
Cone15ag0731 600 FunFam Aldehyde dehydrogenase A 301 495 - -
Cone15ag0731 600 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0731 Cone-Chr15:4201522 Cone8ag0655 Cone-Chr8:6514282 2.00E-58 dispersed
Cone14ag0722 Cone-Chr14:3991627 Cone15ag0731 Cone-Chr15:4201522 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0731 - - - 0.0