Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0761 ATGGCCGCCGTCGCACCGCCCGGAGAATCAACGTCCTTATCGGAAACGGTAACTGACGACGGAATAGTGCGCTTAGCTCAACAGAACCGCTTACACACTGCCCTAATCCTTCCCCCTTACCTTCTCTCTCCTTACTCCCACCAAACCCTCATCACCTACCTCCACTCTCGCTCTTCTTCACCAAATCCATCTCTCGCCGTCTCCGAGTACGTTCTCTCTCTCCTCTCCCTCATTTCTCTATCTCCTCACGCCGCTTCTCTCTCTTCCCTCCTCTCCTCTCTCCTCCTCTCCTACTCTCGCCTCTTTACCTCCATTTCCATCCCTCACGACCCAAATTCTCTAAAAACCATCAAACTCTTCTGTACTCTTCTCGATTACATCCCAACCAACGATCTCTCTCCGATAGTCGATTCCATTGCTTCGTATTTGCCTCAAATCGAAGGCTCTGATGACACTCAGATCCTCGATCTTCTCCCTCGGTGCCTCGAGCTGGTTAGAAATGGGGATTATGTCAATTCGGTGTTTGATCGGATCCTAGTTTGTGATTGGTCGAATGGATTGTTGGTGAAAATGGTGTCTCTGATCAGGGAGATGAATTTTGTCGATAAGGGAAGGGCAAGAGAGTTTCTAGAGAAATGTTTTCTCGGAATGAAGAGTGTGGATTTACAGGACTTGCCTTCACTCGTGTATCAACTGTTGGTTTTAGGGTCTAAGGGGTTTTTCAAGAGGGAGGTGATTGAAGGTATTGTAATGTTTTTCGGGTCAAAAATGGGGACTAAATCGAGCTCCATTATAAGGCAAGTTGAAGGGACCGTTTTGCTCCATATGAATTTTGCAGTGAAGCAGGATCTTTCTTTAGGGCAAGAGGTTATGGGATTAGTGAAGTCTGATCTCAGAGCTTTTAATCATTTCACTGTCGTTGTTTTGTTATCGATTGCGAGGGTTAGGAGATTCAGTGGGAGTTCAATTGGGGTCCTTAAAACAGCAATTGTCACATCCTATCATGATTACAAAATTTCGAGGGACTGTAAGTGGCTACCGGGTGGTTTGAAAGAAGAATTTCTGCAAAATGTCAAGTTGGTTGAAAAGGCTGTTAGTGAGAGCAACTTTGGAAGGGAGCATATTGTTCCCAGCATTTTGCAGTTTGGCTTTATACTATTAGAGTCATCTGAAGAAGAAACACATAGGAAGATCAACTTTTCTAATGGTGTGTTGGGCATTGAGGAACTTGGTATTCAGATTCTGAGAAACTTATTTGAGGTCCATGATATGGCTAGAAATGAGATTATTGAGCAATGCAAATTTCGTGTTCTTTCGTTGAAGCCTGTGCAGAGTGTTCCAGTCTTAAGGTTGCTAGGTAATCTTGTCCAGAGTTATCCTTACCAAATGCTGGAATATGTCTGCCATCTAAAAGAATTGTTGGATTACTTCACTTTCATGAATGGAAAAATTGCTGATCATTTTGTTACATCTCTGTTGCCTCTCATCAGACTGAGCCGTGATCTTCTGGATTACACCATTTTGGTTATGCGCAAGGCCATGTTTAGACGAGAGGTTACCATACGAGTTGCAGCAACTAATGCCCTTATCAATCTCATATTAGCAGAAAAGCAATCAAAGAGAGACGGTCCATTCTCTTTGCAAGATTCATCAAGCCAAGCCAGTAGCAGTCAGCAAGCTGAAAGACAGTTATGCATTGGAGGACTCTTTCAAGAGCTGAGCAGCTTGCTTCAGCGATGTCTTTACCAGCAGGCAAAAGTCAAAGAAGCTTTGTATCGTGGGCTTTTGAAGCTTGTTCTGGTGGAGCCATCAAGTGGGGATGCTATCTTTGATTTCTTGATTCCTCACTTCCTTCATTTTTTCAAGGAGGACACAAAAGTTGAACTTGGGATAAGCCGTTGTGTTAAATCAGAGGGTAGCAAAGTTTACATAGAAGAACCATTAGATTATCTTCTGTTCATCATCTCTAGGATTCTACTTCTTCAGTCAAATGTTAAAACTGATAGAGCTTTGGACTCTTCTTGGACTTCTTTCGGTTTCTCCCTTTCCCAAGATAACGAGGTAGGAAGAAATTCGCCGGCTGAATTATTCTCTTGTGCTTTCGTGAAGATCCGGAAGCTCTTAAGGAGTCAAAGAATGGAAGGCATTCTTGGTCAAGCTCAGGATGCAAGCTCTAAATCTCAGGAAGAAGAGAAAAGTAGATGTATTGCCTTAGTGCTATCAGGGATTCTTGAGGTGGTATTGAATACTATTGCTGCAGAATTGGAGAAAGCAACAGAGCAAAAGAAGTTGGATCTTGAAAAGGAACTTACGGAGATTATTAACAACTGTGATTTGCTTAAAAAATATGCATGTAGATCAAAACAGAGCAATGGTAATAAAAGGGGATTTCCACGAGGCAGCTCTCATGAAATACCTGATAATATGGATTCAAGACCACCCTTGTTATCAACTTCTAGTATTTACAAGCTTTTGGAGAAAGCAATTCAATTATGTAGTAGTGATTGTTCAAAGAATGTTTCAATCGGTGAAAACAACAGTCAATCATCATCAGGCAAGGCATTGAAAGGCGACTCTAACATGATTTATTTTTCCTTGAACTTATTGCTTCATCATATAAAATATTACGTTCTTATTGAGGAGGATCCGTTGAAAACACTGATTTATGGGGAACTCAAGATGCTCGGGCCTCCATTGTTAAAATTAATATATTTGCTAGTTGGACAGAAGTCTGTTACAGTTCAAAAGAGAAAGGAAGCCAAGGGAAAGAAAGATGCTGGAGAGAGAAGTGAACATCTCTATCTAGCTTTGATATGCTTGAAGGAGTTGATAAATGTTAGTTTGTTGAGTTCACACTTTACCAATTTGCTTGATGATTTGGTGTCGGTCTCTACCCTTCAAAATGCTGGTGTTAGTCAGGAATTCGAAGAAGCATCTAGAATTGATGAGCCACGTATCAGAAGCAAAGAATTGTTCCTTATGAAAATATTGAGGCCATTGTTCTCTGAACTCCTTCCACTTTCATTGTTCAGTGAAATCGAGGTCATCTATCATATGTTGTTGATGATTGGAGAATCAATACCACATTGCAAATGGAGAAACGATCATGGTACTTGGGCTCTTAATATCTGCAAAACTAAAGGCATATCAAACTCTAAATTTGCGAAAGGTGTTGTTATGCTTGCAATTCGTTTGAGTTTGCCTCCAAATGATTTCCTTCTAGCTAAAGACATTGCAACTGAGCTTTTAAAAGTTGTTGGATCCGAGAAGGAAAATTCCATAGAGGTGTCTGAATTATACCCCATCATAAATCGATCTACTTCTACCGCATTAAACGATTATATTCTACAATTAATTGAAGAAGTTGTAGTTGATATGGATTGGGCTATCAAGAAACTGAAGATATTGTGTTTGCAAAAGAGCCTTAATTTTAGTCAGAGTCATGAACACAATCTTGGATTGGCTTTTGAGGAAAATCTTTACTCAAGAGCTGAAGCATTGGTTAATGTGTTATCTTCCTTGGTTTCAATGAGCCTAAAAGACCCACAGGCCGATCTTTTGCTCCGTTTGGCTGCAAGGTTTTACAAGCATCTAGCTCAGATGTCAAAGATCCGGATTGCCCCAAAAGGGTTCAAGCAGATTTCTCCGAGCCTTAAATTCCAGAAGCTTGTTGAACAAACCTGTAGACAGTTAACTATCCCTCTTTATAACTTTGTAGCACTAATGCAAAAGAGTCAACAAGAAAATGCTTGTGATAATAAGGGAAGAATACTGAGCAAAATCAAGAGAGAGAACAAATGTATACCAGATTTGATCTTTCAGATAGAAGATTATGAAAAGTATCTGATCCAGCTCAGCAAGGTGAGCAAAGTGAACTTATTGAGGCATGCTAAGCGGAGTACATCTCGGGATTTTAGAATTATAGATGCTGTGGTAACAAACCGAGAAGATGATGAAGAAGAAAATGAAGAAGAAGATGAAGATGCTTCTAACCACGATTCTGATGCAGTTTATAATGAATTGAATAGGACTTTATCACCTGAAATTGTTTGTGGTGAAAATGAAGAAAAAGATGAAGGTGAAGATGGAAATGATGATGGCCTTTGCAATGCGAAAAGATTGAAAAGAGGAAGAGTAGTGCAAGACTCTGATGATGAAGTATAG 4164 40.35 MAAVAPPGESTSLSETVTDDGIVRLAQQNRLHTALILPPYLLSPYSHQTLITYLHSRSSSPNPSLAVSEYVLSLLSLISLSPHAASLSSLLSSLLLSYSRLFTSISIPHDPNSLKTIKLFCTLLDYIPTNDLSPIVDSIASYLPQIEGSDDTQILDLLPRCLELVRNGDYVNSVFDRILVCDWSNGLLVKMVSLIREMNFVDKGRAREFLEKCFLGMKSVDLQDLPSLVYQLLVLGSKGFFKREVIEGIVMFFGSKMGTKSSSIIRQVEGTVLLHMNFAVKQDLSLGQEVMGLVKSDLRAFNHFTVVVLLSIARVRRFSGSSIGVLKTAIVTSYHDYKISRDCKWLPGGLKEEFLQNVKLVEKAVSESNFGREHIVPSILQFGFILLESSEEETHRKINFSNGVLGIEELGIQILRNLFEVHDMARNEIIEQCKFRVLSLKPVQSVPVLRLLGNLVQSYPYQMLEYVCHLKELLDYFTFMNGKIADHFVTSLLPLIRLSRDLLDYTILVMRKAMFRREVTIRVAATNALINLILAEKQSKRDGPFSLQDSSSQASSSQQAERQLCIGGLFQELSSLLQRCLYQQAKVKEALYRGLLKLVLVEPSSGDAIFDFLIPHFLHFFKEDTKVELGISRCVKSEGSKVYIEEPLDYLLFIISRILLLQSNVKTDRALDSSWTSFGFSLSQDNEVGRNSPAELFSCAFVKIRKLLRSQRMEGILGQAQDASSKSQEEEKSRCIALVLSGILEVVLNTIAAELEKATEQKKLDLEKELTEIINNCDLLKKYACRSKQSNGNKRGFPRGSSHEIPDNMDSRPPLLSTSSIYKLLEKAIQLCSSDCSKNVSIGENNSQSSSGKALKGDSNMIYFSLNLLLHHIKYYVLIEEDPLKTLIYGELKMLGPPLLKLIYLLVGQKSVTVQKRKEAKGKKDAGERSEHLYLALICLKELINVSLLSSHFTNLLDDLVSVSTLQNAGVSQEFEEASRIDEPRIRSKELFLMKILRPLFSELLPLSLFSEIEVIYHMLLMIGESIPHCKWRNDHGTWALNICKTKGISNSKFAKGVVMLAIRLSLPPNDFLLAKDIATELLKVVGSEKENSIEVSELYPIINRSTSTALNDYILQLIEEVVVDMDWAIKKLKILCLQKSLNFSQSHEHNLGLAFEENLYSRAEALVNVLSSLVSMSLKDPQADLLLRLAARFYKHLAQMSKIRIAPKGFKQISPSLKFQKLVEQTCRQLTIPLYNFVALMQKSQQENACDNKGRILSKIKRENKCIPDLIFQIEDYEKYLIQLSKVSKVNLLRHAKRSTSRDFRIIDAVVTNREDDEEENEEEDEDASNHDSDAVYNELNRTLSPEIVCGENEEKDEGEDGNDDGLCNAKRLKRGRVVQDSDDEV 1387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4497108 4503796 - Conep15aG0077600.1 Cone15ag0761 453889

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0761 1387 Pfam FANCI helical domain 2 548 784 IPR029312 -
Cone15ag0761 1387 Coils Coil 752 776 - -
Cone15ag0761 1387 MobiDBLite consensus disorder prediction 1314 1387 - -
Cone15ag0761 1387 MobiDBLite consensus disorder prediction 789 814 - -
Cone15ag0761 1387 Pfam FANCI solenoid 1 117 281 IPR029308 -
Cone15ag0761 1387 Pfam FANCI solenoid 4 1075 1310 IPR029314 -
Cone15ag0761 1387 MobiDBLite consensus disorder prediction 1364 1387 - -
Cone15ag0761 1387 Pfam FANCI solenoid 2 375 530 IPR029315 -
Cone15ag0761 1387 Pfam FANCI helical domain 1 285 366 IPR029310 -
Cone15ag0761 1387 MobiDBLite consensus disorder prediction 1314 1331 - -
Cone15ag0761 1387 PANTHER BC025462 PROTEIN 14 1386 IPR026171 GO:0006281(InterPro)|GO:0070182(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0761 K10895 - - vvi:100260122 1462.59
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g168 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0761 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .