Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0770 ATGGGTGGCCAGATGCAGCAGAACAATGCTGCGGCGGCGACTGCTTTCTATGAACACGCCGGTGGTGGGTCGCTGCCCAATGCGGGGCCCACTAACGATGCTGGTGATGCGGTCATGGCCCGGTGGCTTCAGTCCGCCGGTTTGCAGCATCTGGCCTCACCTGTATCTTCCACAGGCATCGATAATCGCCTCCTTCCTAATCTCCTCATGCAGGGTTATGGAGCCCAATCTGCTGAAGAGAAGCAGAGGCTTTTCAAGTTAATGAGAAACCTCAATTTTAATGGGGAGTCTGGTTCTGAACCACAAACACCTACTACAGGTGCAGTGGCTGCAATGGATGGTATTTATTCTCCAGAGCTTAGGGGGGACTTTGGAGCAGGGCTCTTAGACCTTCATGCTATGGATGATACAGAGCTTTTATCTGAGCATGTTATCTCAGAACCCTTTGAGCCCTCACCATTCATGCCTGGTGGTAACAGAGCATTTGATGAGGACTTTAACATTGGTAGCAGCAGGTCACAAGGAGTTCAACCAGATGAGGATGCGTCACCTACATTTCCTGCGATTGAAAAAGAGACTACAGCAAAAGAAAATAGTGTAGCCAAAATTAGAGTTGTGGTACGCAAAAGGCCCTTAAATAAGAAGGAGCTTTCTCGGAAGGAGGATGATATTGTTAAAGTATATGAAAATTCCTATTTGTCTGTTCATGAACCCAAACTGAAGGTTGACTTGACTGCATATGTGGAGAAGCATGAGTTCTGTTTTGATGCTGTTCTTGATGAGAATGTTACTAATGATGAGGTCTATCGTTTAACTGTGGAACCAATTATTCCTACCATCTTTGAACGAACAAAAGCCACATGTTTTGCTTACGGTCAGACAGGTAGTGGTAAGACGTTTACAATGCAACCGTTACCTCTCAGAGCTGCAGAACACCTTGTCAGATTGTTGCACCAGCCAGTTTTTCGCAATCAAAGATTCAAGTTGTGGCTTAGCTATTTTGAGATATATGGTGGAAAACTCTATGATCTTCTTAGTGAAAGAAAGAAACTTTGCATGAGAGAAGATGGACGGCAGCAAGTTTGCATTGTTGGGCTGCAAGAATTTGAAGTTTCTGATGTACAGATTGTGAAAGAATATATTGAGAGGGGGAACTCTTCAAGAAGTACTGGGTCCACAGGTGCTAATGAAGAGTCTTCTAGGTCACATGCTATATTGCAACTTTCTGTTAAGAAGCACGGTGAGGTAAAGGAGTCTAGAAGGAACAATGATGGAAATGAGTCAAAAGGAGGGAAGGTTATTGGGAAAATTTCTTTTATTGATCTTGCTGGCAGTGAAAGAGGTGCCGACACCACTGATAATGATCGTCAAACGAGGATCGAAGGAGCAGAAATCAACAAGAGCCTTTTGGCTCTTAAGGAGTGCATTCGTGCTCTGGATAATGACCAGATACATATACCCTTCCGTGGAAGCAAACTCACTGAAGTGCTCCGTGACTCGTTTGTTGGCAATTCAAAAACTGTTATGATTTCCTGCATTTCTCCAAATGCCGGTTCTTGTGAACATACCCTTAATACTTTGAGATATGCAGATAGGGTCAAGAGTCTGTCAAAAGGTGGAAATGTGAAAAAGGATCAGGCTGGTAGTTCCTTACCACCAATGACTAAAGATGTTACCTCAGCATTGTCAATTCCAGTTTCTTCTGATGTAGAGGACTCTCAATGGTTACGCCAAGATGTGAAAGGAACAGATATGGGAAGAAGGGTCCTGGAAAAAGATAATCTATCTTCGGCTAATATTGACATGCAAACCAATTTTCATTCAAGTCATCCCTACAATGGAAGAGAAGAGAAAAGTGTGGCATTCTCAGTGGATAAAGAGCGGACTGAGATAAAGAACTCATACGGCGATTCAACTAGCCAAAAGACTTCCTCTTATTCGTACAACTCAGTTGATACAGAAGAAAAAGTGCAAAAGGTATCACCACCTCGTAGAAAATCATCTCGAGATGAGAAACCAGAGAGGTTGGGAAACTTGCAGAAAAAGGATAACATTGGGTTCGATCTCTCCACGACAAGCTCCAAGCAGTATAGCACAAGCAGTTATAATGCAACAAACATTGTATCTAAAAGAAATGAACCTGAATCACCTCCTGATGGAAATATCAATGCAATTCTCGAGGAAGAAGAGGCCCTAATTGCTGCCCATAGAAAAGAAATTGAGGATACAATGGAGATAGTGCGTGAAGAAATGAAACTACTAGCTGAGGTGGATCAACCAGGGAGCCGCATAGACAATTACGTGAGCCAGTTGAATTTCATTCTATCTCGCAAGGCAGCTGGTTTGGTCAGTCTTCAAGCTCGCCTGGCAAGGTTTCAGCATAGACTAAAAGAACAAGAGATACTAAGCCGGAAAAGAGTTCCTCGTTAG 2430 43.37 MGGQMQQNNAAAATAFYEHAGGGSLPNAGPTNDAGDAVMARWLQSAGLQHLASPVSSTGIDNRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPQTPTTGAVAAMDGIYSPELRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGNRAFDEDFNIGSSRSQGVQPDEDASPTFPAIEKETTAKENSVAKIRVVVRKRPLNKKELSRKEDDIVKVYENSYLSVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRLTVEPIIPTIFERTKATCFAYGQTGSGKTFTMQPLPLRAAEHLVRLLHQPVFRNQRFKLWLSYFEIYGGKLYDLLSERKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIERGNSSRSTGSTGANEESSRSHAILQLSVKKHGEVKESRRNNDGNESKGGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKGGNVKKDQAGSSLPPMTKDVTSALSIPVSSDVEDSQWLRQDVKGTDMGRRVLEKDNLSSANIDMQTNFHSSHPYNGREEKSVAFSVDKERTEIKNSYGDSTSQKTSSYSYNSVDTEEKVQKVSPPRRKSSRDEKPERLGNLQKKDNIGFDLSTTSSKQYSTSSYNATNIVSKRNEPESPPDGNINAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSRIDNYVSQLNFILSRKAAGLVSLQARLARFQHRLKEQEILSRKRVPR 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4593962 4600106 + Conep15aG0078500.1 Cone15ag0770 453898

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0770 809 PRINTS Kinesin heavy chain signature 436 454 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0770 809 PRINTS Kinesin heavy chain signature 486 507 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0770 809 PRINTS Kinesin heavy chain signature 283 304 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0770 809 PRINTS Kinesin heavy chain signature 393 410 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0770 809 Coils Coil 782 802 - -
Cone15ag0770 809 Gene3D Kinesin motor domain 184 539 IPR036961 -
Cone15ag0770 809 MobiDBLite consensus disorder prediction 684 701 - -
Cone15ag0770 809 ProSiteProfiles Kinesin motor domain profile. 202 536 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0770 809 Pfam Kinesin motor domain 208 535 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0770 809 PANTHER KINESIN-RELATED PROTEIN 6 8 803 IPR027640 GO:0003777(PANTHER)|GO:0003777(InterPro)|GO:0005874(PANTHER)|GO:0007018(InterPro)|GO:0007019(PANTHER)
Cone15ag0770 809 SMART kinesin_4 200 542 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0770 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 536 IPR027417 -
Cone15ag0770 809 MobiDBLite consensus disorder prediction 411 427 - -
Cone15ag0770 809 ProSitePatterns Kinesin motor domain signature. 435 446 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cone15ag0770 809 MobiDBLite consensus disorder prediction 411 432 - -
Cone15ag0770 809 MobiDBLite consensus disorder prediction 596 610 - -
Cone15ag0770 809 Coils Coil 726 757 - -
Cone15ag0770 809 MobiDBLite consensus disorder prediction 631 701 - -
Cone15ag0770 809 CDD KISc_KIF2_like 202 534 - -
Cone15ag0770 809 MobiDBLite consensus disorder prediction 594 616 - -
Cone15ag0770 809 FunFam Kinesin-like protein 182 539 - -
Cone15ag0770 809 MobiDBLite consensus disorder prediction 634 656 - -
Cone15ag0770 809 MobiDBLite consensus disorder prediction 657 681 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0770 K10393 - - vvi:100240940 1232.24
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0770 Cone-Chr15:4593962 Cone16ag0691 Cone-Chr16:8204816 3.20E-219 dispersed
Cone14ag0761 Cone-Chr14:4309719 Cone15ag0770 Cone-Chr15:4593962 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g296 . . . Bda08g00291 . . . . Cmo08g01203 Cmo17g00316 . . . . . . . . . . . . . . Cla06g00478 Cam06g0512 Cec06g0513 Cco06g0516 Clacu06g0496 Cmu06g0498 Cre06g1269 Cone14ag0761 Cone15ag0770 . . . . Chy11g01510 . . . . . Bpe05g00836 . . . Sed02g1073 . . Cma08g01228 Cma17g00327 Car08g01104 Car17g00301 Cpe12g00278 Cpe17g00027 Bhi12g02054 Tan06g2680 Cmetu07g0697 . . . . . . . . . . . Lsi09g01431 . . Cme11g02012
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007921 1 2 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 2 2 1 36