Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0797 ATGAGAGATATGATTACAATCAAAAGTAGTCTCTCCATCTTAGTTTGGGTTTGCCTTCTTGCCTGTGTTCCCTTTAATGTTTGCAGTAACCAAAGTGGATTGAGAAGGGATTTCTACCAGGAAAATTGCCCAGTTGCAGAGAGCATTGTGAGGGATGTAACATGGAGAGAGGTTCGAAATAATCCTCGTCTGCCCGCTCATCTTCTTCGAATGCACTTCCACGATTGCTTTGTCCGGGGATGTGATGCGTCGATCCTATTAGACACTGTTGGTACTAATCAGTCTGAGAAGGATGATGAAATGCATAACAGATCTCTGTCAGGGTTCGATGTAATCGATGATATTAAGACCGAAATCGAGAAGGAGTGCCCAGAAATCGTTTCTTGTGCCGACATTCTCTCCCTAGCTGCTCGCGACGCCATTTCTTTTCAATTTAAAAATCCCATGTGGGAAGTATTCACAGGTAGAAGAGATGGAAATATTTCTCTAGCAAAGGAAGTGCATGCAAACATTCCTCATTCATTCTCTGACTTTGACAAACTCACCCAAGTGTTCTCCTTGAAAGGTCTTGATGTTAACGACCTTGTGGTCTTATCAGGTGCTCATACAATTGGTAAATCACATTGCCATCATTTCTCAAGGAGGCTCTACAATTTCACAGGCAAAGGGGATATAGATCCATCTCTAGATTTAAGTTATGCCGAGTACTTGAAAATACTATGCTCAAACAACTCTAAAAATGTAGATGGTGAAGCAATAGCTGTGGATATGGATACAAAGAATTCTAGTTCATTTGATAATCATTATTATAAAAAACTTAGCCAAAAGATGGGTTTATTTCAATCTGATGCTTCTCTCCTCACAGACGACAGATCGTCTCAGATCGTGAGACAGTTAAGAACTTCAAATGTTGCATTTTACTCCGAATTCGGTAAGTCTATGGAGAAGCTTGGAGCCATTCAAGTTCTTACTGGAACTGATGGAGAAATTAGAAAAAAATGTCGTTTCGTAAATACATAA 1020 39.9 MRDMITIKSSLSILVWVCLLACVPFNVCSNQSGLRRDFYQENCPVAESIVRDVTWREVRNNPRLPAHLLRMHFHDCFVRGCDASILLDTVGTNQSEKDDEMHNRSLSGFDVIDDIKTEIEKECPEIVSCADILSLAARDAISFQFKNPMWEVFTGRRDGNISLAKEVHANIPHSFSDFDKLTQVFSLKGLDVNDLVVLSGAHTIGKSHCHHFSRRLYNFTGKGDIDPSLDLSYAEYLKILCSNNSKNVDGEAIAVDMDTKNSSSFDNHYYKKLSQKMGLFQSDASLLTDDRSSQIVRQLRTSNVAFYSEFGKSMEKLGAIQVLTGTDGEIRKKCRFVNT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4884337 4887044 + Conep15aG0081200.1 Cone15ag0797 453925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0797 339 FunFam Peroxidase 172 317 - -
Cone15ag0797 339 Gene3D Peroxidase, domain 2 172 317 - -
Cone15ag0797 339 CDD secretory_peroxidase 33 337 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone15ag0797 339 Pfam Peroxidase 50 300 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 FunFam Peroxidase 37 180 - -
Cone15ag0797 339 SUPERFAMILY Heme-dependent peroxidases 34 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 ProSiteProfiles Plant heme peroxidase family profile. 33 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Cone15ag0797 339 PANTHER PEROXIDASE 25-RELATED 22 334 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone15ag0797 339 Gene3D - 37 338 - -
Cone15ag0797 339 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone15ag0797 339 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0797 Cone-Chr15:4884337 Cone8ag1448 Cone-Chr8:11200470 2.54E-98 dispersed
Cone14ag0796 Cone-Chr14:4694281 Cone15ag0797 Cone-Chr15:4884337 6.74E-222 wgd
Cone15ag0797 Cone-Chr15:4884337 Cone4ag0180 Cone-Chr4:842610 2.97E-56 wgd
Cone15ag0797 Cone-Chr15:4884337 Cone7ag0184 Cone-Chr7:777112 1.16E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0797 K00430 - rcu:107261388 367.851