Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0805 ATGGGTTGTGTCCATGGAAAGTGTTGCAGCCAATACCCACCCTCGTCGGACGGGGACTCACCGGCCGGCGGTCCGTACAACCCACATGCTAGATCCGTTCTCTCAGAGAGATCCTTAGAGGTAGTTCCTGTTCCTTCCCACAATTACAGTTTAGAATACTCTGTGTTCACTCAACGTGGTTACTACCCTGAATCGTTGGAAAAAGAAAACCAGGACAGTTTGTGCATCAAAACACAAATCCAAGGTAACCCTAATATCCATTTCTTCGGTGTATTTGATGGGCACGGTCAATATGGGATGGAATGTTCGAACTTCGTTAAAGATAGGCTAGAAGAAATACTTTCCAATGACCCCACATTGTTAGACGATCCTGTACAAGCTTATACCTCTGCATTTCTAGCTACAAATCAGGAACTACATAACAGTGAGGTAGATGATTCTATGAGTGGCACAACTGCAATTACGGTCCTTGTTATAGGGGACACTATCTATGTAGCAAATGTGGGTGATTCTCGGGCAGTTATTTCAGTAAAAGGAGAAGGGGGTCGGATTGTGGCTGAGGATTTGTCTAAGGATCAGACCCCGTTTAGGAAAGATGAGTATGAGAGGGTGAAGCAATGTGGGGCCCGGATTTTGAGTGTCGATCAAGTGGAAGGGCTCAAGGATCCAGAGATTCAGACCTGGGGTGATGAAGAGAGTCAGGGCGGAGACCCGCCTCGGCTGTGGGTCCAACATGGGATGTATCCTGGAACCGCATTCACAAGGAGTGTGGGGGATAGTACAGCGGAGAAGATTGGGGTGGTTGCTTTTCCAGAGGTTACGGTGGTCAGGCTCACACCGAATCATCTCTTCTTTGTTGTTGCAAGCGACGGAGTTTTCGAGTTTCTCCCGAGTCAAACTGTGGTCAATATGGCAGCAGGATATACAGATCCTCGGGACGCATGCTCTGCTATTGCAGGCGAATCGTACAAACAGTGGTTGGAACATGAAAACCGGACAGATGATATAACAATCATCCTTGTACGTATCAGGGGCTTGTCTAATTCAGGTGTAGTTGCTGATAGTGGGTCAAGAGGGAATGGTAATATTAATAGGCCAACAAGGACAGGGAAAGCAACCTCTGAGATAACTGCTACAACTGGATTGGAAGTTTTCCGTTCTATGAGAAGCGAATTCTCGGATCATACACAAGTTTCTCAGCATGTGGCTTCCATCAGTAGAAGTCCGGCTATTGTCGTTCCATCTCCCACTCTTCCCGGGCTCTTGGAAGTGGATGTGGGTTAG 1284 47.35 MGCVHGKCCSQYPPSSDGDSPAGGPYNPHARSVLSERSLEVVPVPSHNYSLEYSVFTQRGYYPESLEKENQDSLCIKTQIQGNPNIHFFGVFDGHGQYGMECSNFVKDRLEEILSNDPTLLDDPVQAYTSAFLATNQELHNSEVDDSMSGTTAITVLVIGDTIYVANVGDSRAVISVKGEGGRIVAEDLSKDQTPFRKDEYERVKQCGARILSVDQVEGLKDPEIQTWGDEESQGGDPPRLWVQHGMYPGTAFTRSVGDSTAEKIGVVAFPEVTVVRLTPNHLFFVVASDGVFEFLPSQTVVNMAAGYTDPRDACSAIAGESYKQWLEHENRTDDITIILVRIRGLSNSGVVADSGSRGNGNINRPTRTGKATSEITATTGLEVFRSMRSEFSDHTQVSQHVASISRSPAIVVPSPTLPGLLEVDVG 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4938604 4941732 - Conep15aG0082000.1 Cone15ag0805 453933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0805 427 Pfam Protein phosphatase 2C 68 318 IPR001932 -
Cone15ag0805 427 Gene3D - 38 344 IPR036457 -
Cone15ag0805 427 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 47 345 - -
Cone15ag0805 427 CDD PP2Cc 68 343 IPR001932 -
Cone15ag0805 427 ProSiteProfiles PPM-type phosphatase domain profile. 52 343 IPR001932 -
Cone15ag0805 427 SUPERFAMILY PP2C-like 39 345 IPR036457 -
Cone15ag0805 427 PANTHER PROTEIN PHOSPHATASE 53 342 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone15ag0805 427 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169(InterPro)
Cone15ag0805 427 SMART PP2C_4 27 341 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0805 Cone-Chr15:4938604 Cone4ag0752 Cone-Chr4:4192648 2.40E-132 dispersed
Cone14ag0804 Cone-Chr14:4760126 Cone15ag0805 Cone-Chr15:4938604 1.47E-240 wgd
Cone15ag0805 Cone-Chr15:4938604 Cone4ag0190 Cone-Chr4:891397 1.46E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0805 - - - 0.0