Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0811 ATGCAGCCTGATCAAAGAAGAAAGTCATCTGTGGAAGTGGACTTCTTTACAGAATATGGAGAGGGGAGTAGGTACAAGATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGTTCTGCATATGATACACATACTGGAGAAAAAGTTGCAATAAAGAAAATCAACGATATATTTGAGCATGTCTCTGATGCAACCCGAATCCTTCGTGAGATAAAACTTCTGAGACTACTACGTCATCCGGACATCGTGGAAATTAAGCACATTTTGTTGCCACCTTCTAGAAGGGAATTCAAAGACATATATGTTGTATTTGAGCTAATGGAATCTGATTTGCATCAAGTTATTAAAGCAAATGACGATTTGACTCCTGAACACTATCAATTCTTTCTTTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCGAATGTCTTCCACAGGGATTTAAAACCCAAAAATATCTTAGCAAATGCTGATTGCAAACTTAAGATCTGCGACTTTGGTCTAGCAAGAGTTGCTTTTAACGATGCTCCTACTGCCATATTCTGGACTGATTATGTGGCAACAAGATGGTACAGAGCACCTGAACTGTGTGGATCATTTTTCTCGAAGTATACACCAGCAATAGATATATGGAGCATCGGGTGCATCTTTGCAGAGCTTTTAACAGGAAAACCACTTTTTCCTGGGAAAAATGTGGTTCACCAATTAGATTTGATGACAGATCTGTTAGGAACACCATCTTCTGACGCCATTGCCAGGGTACGCAATGAGAAGGCTCGGAGATACCTTAGCAGCATGCGGAAGAAGAAGGCCGTTCCTCTCACCCAGAAGTTCCCCCATGCAGATCCACTGGCACTTTGCTTGCTAGAGAGAATGTTAGCATTTGAGCCCAAGGATAGGCCTTCAGCTGAGGAGGCTCTAGCAGATCCTTATTTTAAGGGCTTGGCAAAGGTTGAGAGAGAGCCTTCCGCTCAACCAGTGACGAAGATGGAATTTGAATTTGAGAGGAGAAGGATAACAAAGGAAGATGTACGAGAGCTTATCTATCGAGAAACTCTTGAGTACCACCCTAAGATGTTAAAGGAGTTCTTGGAAGGATCAGAGCCAACAGGATTTATGTATCCAAGTGCTGTTGACCATTTTAAGAAGCAGTTTGCTTACCTTGAGGAACACTATGGAAATGGCACTACTGGTACCCCGCCCGAAAGGCAGCATGCATCCCTACCCAGGGCCTGCATGCTTTATTCAGACAATTCCTTTCAGAACTCAGCTGAAATCTCTAATGACCTCTCCAAATGTTCCATTAAAGAAATTGAGAAACATGTGGAAAGAAGTTGTGGTATCCCTATGACTAGACTTCCTATTCAAGTCCCTCAAAATATCCAAGGTGCTGCAAGGCCCGGTAAAGTTGTCGGCTCAGTATTACGGTACAATAATTGTGGTGTGGCAGCAACAGCTGAGGGTGGTGGTCTTGACCAAAGGAGAATGGTTAGGAATCCTTCTGTTCCTCCTCAATATTCTTCTGCCACGAGCTGTTCTTTTCCAAGAAGAAACCCGTCCTGCAAAAATGAGAGTGTGGGAGAAGATGATGGCCTTTCAACTACCAACAGTCTGAGACCAAAGGCATACTATATGGGTCGGAAACTTGCTGCTGCTCCAGGAGGACCTGGAAATCATTGA 1692 43.14 MQPDQRRKSSVEVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDAPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSSDAIARVRNEKARRYLSSMRKKKAVPLTQKFPHADPLALCLLERMLAFEPKDRPSAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRETLEYHPKMLKEFLEGSEPTGFMYPSAVDHFKKQFAYLEEHYGNGTTGTPPERQHASLPRACMLYSDNSFQNSAEISNDLSKCSIKEIEKHVERSCGIPMTRLPIQVPQNIQGAARPGKVVGSVLRYNNCGVAATAEGGGLDQRRMVRNPSVPPQYSSATSCSFPRRNPSCKNESVGEDDGLSTTNSLRPKAYYMGRKLAAAPGGPGNH 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5034487 5040161 - Conep15aG0082600.1 Cone15ag0811 453939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0811 563 MobiDBLite consensus disorder prediction 502 542 - -
Cone15ag0811 563 FunFam Mitogen-activated protein kinase 111 339 - -
Cone15ag0811 563 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Cone15ag0811 563 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0811 563 FunFam Mitogen-activated protein kinase 15 119 - -
Cone15ag0811 563 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0811 563 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cone15ag0811 563 MobiDBLite consensus disorder prediction 504 524 - -
Cone15ag0811 563 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Cone15ag0811 563 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0811 563 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0811 563 CDD STKc_TDY_MAPK 24 361 - -
Cone15ag0811 563 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Cone15ag0811 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0811 Cone-Chr15:5034487 Cone3ag1494 Cone-Chr3:33561670 6.86E-258 dispersed
Cone14ag0812 Cone-Chr14:4836392 Cone15ag0811 Cone-Chr15:5034487 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82151 PF00646 F-box 5.00E-07 CL0271 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0811 - - - 0.0