Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0823 ATGACGATGGCGATGATAGAGAGCATTGTCGGTTTTATCGTCCTCCTTATGCTGCTTCTGATCCTCCTTCTCGTCATTCTCGCCTGCAAGCCATGGCGCTTCTTTCCGTCTTCTTGGCACTCCCGCACTATCAAGGTTGCCGAAGAAGAGAAGCTTCTTATGTCAGACAATGCGGAGATTCATAATCAAAACAATGATCTTCCAAGAGATTATGATATAGAGGGAGCTCTTCCAGCTGATGGGCATTTCCGCTCCCCTCGAGCACATGGACTTGTTTATAAACAGCGGTTTCCTTCTGCATCTCCCCATGCGAATCCAGGTGATAGCTTTGTTCTAGATGTAAAAATAGTTTCTGAACCTTCTGAAGACATTTTGCTTGGTCAGACACTTAAGCATCCATATGTACCAAACCAAAATGTGGAAGGTCAGAGACATGTTAGGCAGAGTCCAGGAAAGGATAGACTTGGAGAGTTTGTGGAAAAAGACATTGTACATCAAAGAAGCTGCCTCACTTTGGAGGTTATCTCTGGACCTTCTTCTGGGCTTTGTTTTTCTGTACAGTCGACAGATGCCTCCAGGCTTCCATTAACCCTTGGAAGGGTTTCTCCAAGTGATTTGCTAATAAATGATACAGAGGTTTCAGGGAAGCATGCATTGATACAGTGGAATTTAAACAAGATAAAATGGGAGTTGGTAGACATGGGTAGCCTAAATGGGACATTTTTGAATTCTCAATCCATCAACAATCCCGATTCTGGTCGTAGACAATGGGGTGACCCAATCGAACTTGGTAATGGAGACATAATAACTCTTGGCACAAGCTCAAAAGTACATGTTCATGTCACATCTCAATCTGTTTGCCAGATCCCCTTTGCGGTTGGAATTGCCTCAGATCCTATGGCTTTACGTCGCGGGGCAAAGAAGCTTGCTATGGAAGATGTCTGCTTTTATCAATGGCCACTTCGTGGGATTGATCAGTTTGGGCTTTTCTGTATCTGGGATGGACATGGTGGAGTAGCTGCTGCAAGATCTGCTAGCGAAATTCTTCCTGAGAGGGTTGCTACTATATTAGCAGATACGCTAGAGAGGCAACGAGTTTTATCTCAGTCAGATGCTTCAGATGTTCTTAGGGATGCATTTGCTCAGACAGAAGCTTGTATGGACCACCCGTATGAGGGTTGTACTGCCACAGTGCTTTTGGTATGGGCAGCTGGTGATGGAAGGCTTTTTGTGCAGTGTGCAAATGTTGGGGACTCTGCTTGTGTTATAAATGTTGATGGTAAACAGATAAAGATGACAGAAGACCACAGAATAACTAGTTTTTCAGAAAGGGTCAGAATAGAAAAATTAGGAGAACCTTTGAAAGATGGAGAAACACGTTTATGTGGCTTGAACCTTGCGAGGATGCTTGGGGACAAATTTCTCAAACAGCAAGATAATCGCTTCAGCTCAGAGCCTTATATAAGTCAGGTTGTGCATATCAATCAAGCTAACAGCACATTTGCACTAATGGCAAGTGATGGCTTATGGGATGTGATCAGCGTCAAGAAGGCAATTCAGCTTGTCCTTCAGGCTAGACAGAAATATTGTACTGATGCGGAGAGATCAGCCGAGAGGATTGCTAGCTTCTTGTTGGGCGAGGCTAGAACACTACGAACAAAGGATAATACTTCTATAATTTTCTTAGATTTTGGCACCTCCCCCGGAAACTCCTGTAAAGAATTATGA 1728 43.81 MTMAMIESIVGFIVLLMLLLILLLVILACKPWRFFPSSWHSRTIKVAEEEKLLMSDNAEIHNQNNDLPRDYDIEGALPADGHFRSPRAHGLVYKQRFPSASPHANPGDSFVLDVKIVSEPSEDILLGQTLKHPYVPNQNVEGQRHVRQSPGKDRLGEFVEKDIVHQRSCLTLEVISGPSSGLCFSVQSTDASRLPLTLGRVSPSDLLINDTEVSGKHALIQWNLNKIKWELVDMGSLNGTFLNSQSINNPDSGRRQWGDPIELGNGDIITLGTSSKVHVHVTSQSVCQIPFAVGIASDPMALRRGAKKLAMEDVCFYQWPLRGIDQFGLFCIWDGHGGVAAARSASEILPERVATILADTLERQRVLSQSDASDVLRDAFAQTEACMDHPYEGCTATVLLVWAAGDGRLFVQCANVGDSACVINVDGKQIKMTEDHRITSFSERVRIEKLGEPLKDGETRLCGLNLARMLGDKFLKQQDNRFSSEPYISQVVHINQANSTFALMASDGLWDVISVKKAIQLVLQARQKYCTDAERSAERIASFLLGEARTLRTKDNTSIIFLDFGTSPGNSCKEL 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5471335 5476545 - Conep15aG0083900.1 Cone15ag0823 453951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0823 575 CDD FHA_PP2C70-like 170 280 - -
Cone15ag0823 575 ProSiteProfiles Forkhead-associated (FHA) domain profile. 196 247 IPR000253 GO:0005515(InterPro)
Cone15ag0823 575 SUPERFAMILY PP2C-like 302 565 IPR036457 -
Cone15ag0823 575 Gene3D - 301 569 IPR036457 -
Cone15ag0823 575 SMART FHA_2 195 247 IPR000253 GO:0005515(InterPro)
Cone15ag0823 575 PANTHER PROTEIN PHOSPHATASE 2C 303 564 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cone15ag0823 575 FunFam Protein phosphatase 2C 70 300 571 - -
Cone15ag0823 575 Pfam FHA domain 197 272 IPR000253 GO:0005515(InterPro)
Cone15ag0823 575 ProSiteProfiles PPM-type phosphatase domain profile. 292 564 IPR001932 -
Cone15ag0823 575 CDD PP2Cc 304 564 IPR001932 -
Cone15ag0823 575 Pfam Protein phosphatase 2C 307 556 IPR001932 -
Cone15ag0823 575 SMART PP2C_4 286 562 IPR001932 -
Cone15ag0823 575 FunFam Protein phosphatase 2C 70 165 299 - -
Cone15ag0823 575 Gene3D - 164 300 - -
Cone15ag0823 575 SUPERFAMILY SMAD/FHA domain 168 277 IPR008984 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0823 Cone-Chr15:5471335 Cone7ag0230 Cone-Chr7:979564 3.24E-269 dispersed
Cone15ag0823 Cone-Chr15:5471335 Cone4ag0220 Cone-Chr4:1013385 6.09E-246 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0823 K01090 - mdm:103414648 776.933