Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0833 ATGAATGCCGGAACGACGACGTTTCAGTCCATACTTGATAAACCCCTAAACCAGCTCACCGAGAATGACATTTCTCAGGTCACACGAGAAGACTGTCGCAAATACCTCAAGGAGAAAGGAATGCGTAGGCCTTCCTGGAACAAATCGCAGGCGATCCAGCAAGTGATTTCTCTCAAAGCTTTGCTCGAACCTTGCGATGATTCCGGCGCCGGTGCTCTCCGGAAGGTGGCTATTTCGCCTCGGGTGAGTTTGAATCAAGGTGATTCAACCAAGGAACCAAGCGACGATGCCCAAGATCCTGCTTCTGTGGATGACTCTGTTACTTGTCGAAAAACGGACCCTCAGAGATCTGTACCTGAGATGAGCGACCCGCCGATTGACCCAGAAAACAATGTCTCAAGTCCCAGAAGTGAAGGTGCACCATTTGAGTCGATTGGGCAAATGACCATTTTCTACTGCGGCAAAGTAAATGTTTACGATGGGGTCGCACCAGAAAAGGCACAAGGGATTATGCATCTTGCGGCTAGCCCGATTCATTTTCCGAACGAGGACTCAGTTGGTGGGACTGGAGCTATTTGGCATTCTCCGTATTATTTGCAAACTGCAAGTGAGAGGGATGGTATTTTTCCTCCTAATGCCAATATGTTCCAGACGATTCAATCAGGGAAGATGGTCGAGTCCCCTCAACAACATCAAGACAAAGGAAATGTGAATCGTGATATTGATGTAGAGGGGCAGGCAAACAGGAAAGTCTCCTTGCAGAGATATCTCGAAAAGAGAAAAGATAGAGGAAGATTAAAGAGCAAGAAAAATCCCGGATTAAATTCTAGCTTGGAGGCGTATTTAAATTATCATGCGAGGACAACACATATCTCAAATGGGAATCCGGGAGAAATAAGAACAATCTCACCTTCACAACCTGGACTACAAGGCTATGTTGGATCAACTGATAATCAGGCAAATATTGCCTATAATCTGCTCAACCTAAACGTAAATGATATTCAAGAATGCTGA 1014 45.56 MNAGTTTFQSILDKPLNQLTENDISQVTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGAGALRKVAISPRVSLNQGDSTKEPSDDAQDPASVDDSVTCRKTDPQRSVPEMSDPPIDPENNVSSPRSEGAPFESIGQMTIFYCGKVNVYDGVAPEKAQGIMHLAASPIHFPNEDSVGGTGAIWHSPYYLQTASERDGIFPPNANMFQTIQSGKMVESPQQHQDKGNVNRDIDVEGQANRKVSLQRYLEKRKDRGRLKSKKNPGLNSSLEAYLNYHARTTHISNGNPGEIRTISPSQPGLQGYVGSTDNQANIAYNLLNLNVNDIQEC 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6085092 6089029 + Conep15aG0084900.1 Cone15ag0833 453961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0833 337 MobiDBLite consensus disorder prediction 84 140 - -
Cone15ag0833 337 SMART tify_2 141 176 IPR010399 -
Cone15ag0833 337 Pfam tify domain 147 175 IPR010399 -
Cone15ag0833 337 Pfam Jas motif 246 272 IPR018467 -
Cone15ag0833 337 ProSiteProfiles Tify domain profile. 141 176 IPR010399 -
Cone15ag0833 337 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 21 272 IPR040390 GO:0005634(PANTHER)|GO:0009611(PANTHER)|GO:0031347(PANTHER)|GO:2000022(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0872 Cone-Chr14:5607392 Cone15ag0833 Cone-Chr15:6085092 2.36E-219 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44882 PF02470 MlaD 2.20E-14 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0833 - - - 0.0