Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0865 ATGGAGAAAAAAGACAGTAGTGTGCGTTATGGGGCTGAAGTAGAGGGAAATGAAGCCCCAGAAAGAAATTTGGCTTCCCCTCTGAAACCTGAAAATCCCAGCCCACTGGGTGGGACCGAAATGGTGGGGCCTGCTGCTATACCGCATGTCAATGGTGTAGCAGGGAGTACAGAAGGGAATAAGAAGAAGAGGGGGAGGGGGAGGCCTAGAAAGTATGGACCGGATGGGCAAGTAGCTTTACCATTGTCCCCAATGCCTATTTCGGCATCAATTCCTCTGACCGAAGAGTTTACCAGTTGGAAATTGGGTAGAGGTGGGCCTTTGGAGTCGATCAAGAAGACTCATAAACATGAGCGTGATAGTCCAGGTGGGAAGATTGCATACTCGGTTGGCTCAAATTTTACTCCTCATTTGATCACTGTTTATGCTGGTGAGGATGTTATCATGAAGGTTATGTCTTTCTCGCAACAGGGATCTAGAGCTATTTGCATACTCTCAGCAAATGGTACAATTTCAAATGTTACTCTTAGGCAGCCTACTTCTTCTGGTGGTACTTTAACATATGAGGGTCGTTTTGAGATATTATCATTATCGGGATCTTGTATGCCAATTGAGAATGGAGAGACAGAGAGCAGATCAGGAGGGATGAGCGTCTCCTTGGCAGGCCCAGATGGTCGAGTTGTAGGTGGCGGACTTGCTGGTCTCTTGGTTGCTGCCGGTCCTGTGCAGGTTGTGTTAGGTAGTTTCCTTCCTGGTCATCAGCAAGAAAACAAGCCGAAAAAGCACCGAATCAAGCACTCATCTACCATTATTTCCACCCCTATCACTTCTCTTTCTGATGGAGAACTGAAAGGTATCTATGGCGGAATAAAGCCCATCCTCATGACTGCTTCCCATCTAGGAGACAATACCGCTTTAAACCCGATGCTGGCCTTTATATCCAAAGATGAATCCAAGGGCACAAACCCAACTAATTGTGAGGTCTTATATTAA 993 46.42 MEKKDSSVRYGAEVEGNEAPERNLASPLKPENPSPLGGTEMVGPAAIPHVNGVAGSTEGNKKKRGRGRPRKYGPDGQVALPLSPMPISASIPLTEEFTSWKLGRGGPLESIKKTHKHERDSPGGKIAYSVGSNFTPHLITVYAGEDVIMKVMSFSQQGSRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSCMPIENGETESRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVLGSFLPGHQQENKPKKHRIKHSSTIISTPITSLSDGELKGIYGGIKPILMTASHLGDNTALNPMLAFISKDESKGTNPTNCEVLY 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6575646 6578807 + Conep15aG0088100.1 Cone15ag0865 453993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0865 330 Gene3D - 136 267 - -
Cone15ag0865 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 254 - -
Cone15ag0865 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 41 266 IPR039605 GO:0003680(InterPro)
Cone15ag0865 330 ProSiteProfiles PPC domain profile profile. 131 272 IPR005175 -
Cone15ag0865 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Cone15ag0865 330 FunFam AT-hook motif nuclear-localized protein 1-like 136 268 - -
Cone15ag0865 330 CDD DUF296 135 249 IPR005175 -
Cone15ag0865 330 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0865 Cone-Chr15:6575646 Cone8ag0357 Cone-Chr8:2067946 1.33E-89 dispersed
Cone15ag0865 Cone-Chr15:6575646 Cone6ag0720 Cone-Chr6:3625087 2.25E-91 transposed
Cone15ag0865 Cone-Chr15:6575646 Cone9ag0724 Cone-Chr9:3455326 1.59E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0865 - - - 0.0