Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag0870 | ATGGCTCCGACTGCACTTGCTTCACGGTTTGAACAATCAGTCACGCCAAACGCTCTCCGGTCTTATCTCGCAGAGTTTATCTCAACGTTCTTATATGTCTTTGCTGCTATCGGATCGACAATGTCGTCTCGGAAGTTGATGCCTGATTCTGGTTCAGACCCAGCAAGTCTGTTAGTGGTTGCTGTGGCCAATGCATTTGCGTTGGCTTCTGCTGTGTACATCTCAGCCAACATCTCGGGCGGGCATGTGAATCCGGCTGTCACTTTCGGAATGGTGGTGGGGGGTCATATAAGTGTCCCCACTGCGCTGTTTTACTGGGCTTCTCAGATGCTCGCCTCTGTTCTTGCCTGCCTTGTCTTAAGCATAACTATTGCTGGACAGCATATCCAGAGCTATGCAATCACAGAGGAAATATCTGGATTTGGAGCATCTATACTGGAAGGCATCCTAACATTTGCTTTGGTTTATACCGTGTGTGTTGCTAGTGACCGTAGACATGGTTCATTCGCTACCACTGGGCCCTTAGCGATTGGGTTGGTTGCCGGAGCCAATATCTTAGCCGCAGGTCCCTTCTCAGGTGGGTCAATGAACCCGGCTTGTGCCTTCGGGTCTGCAATTTTTGCTCGTAGTTTCAAGAACCATGCAGTTTACTGGGTCGGACCGTTGATGGGTGCTGCTGTTGCTGGGCTCTTATATGACAATGTTGTATTTCCCGCAGAGGCTCCAGATTCTGTTAGGAGGACTTCCGATGATATTGGCCTCTAA | 765 | 49.67 | MAPTALASRFEQSVTPNALRSYLAEFISTFLYVFAAIGSTMSSRKLMPDSGSDPASLLVVAVANAFALASAVYISANISGGHVNPAVTFGMVVGGHISVPTALFYWASQMLASVLACLVLSITIAGQHIQSYAITEEISGFGASILEGILTFALVYTVCVASDRRHGSFATTGPLAIGLVAGANILAAGPFSGGSMNPACAFGSAIFARSFKNHAVYWVGPLMGAAVAGLLYDNVVFPAEAPDSVRRTSDDIGL | 254 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 6663624 | 6664578 | + | Conep15aG0088600.1 | Cone15ag0870 | 453998 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag0870 | 254 | FunFam | Probable aquaporin TIP5-1 | 4 | 244 | - | - | |
Cone15ag0870 | 254 | PANTHER | AQUAPORIN-8 | 10 | 238 | IPR034294 | GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) | |
Cone15ag0870 | 254 | PRINTS | Major intrinsic protein family signature | 215 | 235 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone15ag0870 | 254 | PRINTS | Major intrinsic protein family signature | 20 | 39 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone15ag0870 | 254 | PRINTS | Major intrinsic protein family signature | 178 | 200 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone15ag0870 | 254 | PRINTS | Major intrinsic protein family signature | 64 | 88 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone15ag0870 | 254 | PRINTS | Major intrinsic protein family signature | 101 | 120 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone15ag0870 | 254 | PRINTS | Major intrinsic protein family signature | 146 | 164 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone15ag0870 | 254 | Pfam | Major intrinsic protein | 15 | 232 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone15ag0870 | 254 | SUPERFAMILY | Aquaporin-like | 13 | 239 | IPR023271 | - | |
Cone15ag0870 | 254 | Gene3D | Glycerol uptake facilitator protein. | 4 | 246 | IPR023271 | - | |
Cone15ag0870 | 254 | ProSitePatterns | MIP family signature. | 82 | 90 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0870 | Cone-Chr15:6663624 | Cone16ag0705 | Cone-Chr16:8283798 | 5.43E-74 | dispersed | |
Cone15ag0870 | Cone-Chr15:6663624 | Cone13ag0365 | Cone-Chr13:3340961 | 4.99E-68 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag0870 | K09873 | - | mdm:103417848 | 358.992 |