Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0879 ATGGACGGGAAGAAACTTGAGAATGCTGTTGCTGTGGCGATCACTGGAAGTGGAAAGAGTAGAATTCTCGTTAAGTGGTGTATCGAAAAGTTCATTCCCGAGGGTATTGTTAATTTCAAGTTGATTCACATCTACCCAAAGATTACTTCTGTCCCTACACCTTGTAAGAAATGTTATGCCAAGAAAAAAAAAAGTGGGGATTCACTCCCGATTTCAAAAGTCCGGGACGATGTTGCCGCTGCTTACAAGAAGGAAATAGAGTGGCAAAGGAGTGAAAAGCTGCTTCCCTATAAAAAGATGCTTTCTCATGGAAAGGTTGTAGTAGATGTTGTAGTGATTGAATCAGATGATTTGGCACATGCAATATCAAAGGAAGTTGCTAATTGCAATATCAACAAGCTTGTAATTGGAGCTTCATCTAGTAGTTTGTTTTCAAGGAAAACTAAAGGAGTAGTATCTTCACTAATCTCGACCTGTGCCCCAAAATTCTGCACTGTCTATGCTATCTCGAAAGGAAAATTGGCATCCATACGCTCGCCTGAACTAGGGAATAGTATAACTCCAACTGATCTTGAGAGAAATGAAAGCATTAAGGATGATGCTAGTGAAAGAAGTTCTACAAACAGTGGCTCTAGCTACACTTCCAGCGCACAAACAGAATATACAGAAGGAGTTTCTGTCGGCTCAATCTCTCTTTTCAGTTCTTCTTCGCTACCATTTCAGAGATTTCAGGCTCTTTCAAACATAAATCAGACCGTCCTGAATAAAAAGGTGAGTTCAATAGAAGGAAACCGTTCTAGATCCATCTCCCTCGAGATCGAAAACAAGAAGCCCCATAGTTCAGATAGTAGCTGGAGGAATTTGACTGAGGACCAGTTATCGGTTTCTGGTGAATCTTCCACTTCAGAAGCTTTTCTTAATTATGGCCATTCTTCAAGTGAAAGTCAGCAAAATATTGAGTTTGAGCTTGAAAAGCTTAGAGTAGAACTCAGGCATGCACGAGGAATGTACGCCATTGCGCAAAACGAGACAATCGATGCCTCTCGAAAGCTGAACGATCTAAATAAAAGACGGATGGAAGAAGCTAAGAAGCTTGAGGAGATCAAAAACAAAGAGGAGAATGCCAAGGAATTGGCAAGACAAGAGAAACATAAGCTTGAAGCTACAATAAGAGAAGCCACATACATGAAAGAACGTGCAGAAAGAGAAGCCTTTTTAAAGAGAGATGCTGAGATTAAGGCCATGCGTGATGCAAAGGAGAAGGAAAAACTTAAGCATGCTCTTCTGGGCTCTTCTCAGCAGTACCAAGATTTCTCGTGGGAAGAGATCGAGTCCGCCACGTCATCTTTCTCCGAAGATCTCAAGATCGGATTTGGAGCTTATGGAACGGTTTACAAGTGTAGTTTGCATCATACAACTGCAGCTGTGAAAGTCCTACACTCTCCAGATTGTAGCAAAAATAAGCAATTCCGACAAGAGCTTGAAATCTTGAGCAAAATCCGACATCCACATTTGCTTATCCTTCTCGGTGCATGTGAAGACCGAAGCTGCTTAGTCTATGAGTACATGGAGAACGGGAGCTTGGAGGATAGGTTATTTTGTAAAAACAGAACACCTCCTATTCCTTGGTACGAACGGTTCCGGATTGCTTGGGAAGTAGCCTCAGTCCTGGTCTTTTTACACAGCTCAAAGCCAGAACCAATCATCCACCGTGACCTGAAGCCCGCAAATATCTTACTTGACCATAACCTTTTAAGCAAGATTGGGGATGTGGGCCTTTCTACAATACTCAACTCAAACCGTTCTCTTTCTACTGCAAACAAGGAAAGTGGAGTTGTGGGTACTTTTTGCTATATAGATCCTGAGTATCAAAGAACAGGGATACTCTCTCCTCTGTCGGATGTTTATGCTTTTGGGATGGTGGTCTTGCAGTTACTGACTGCAAAACCGGTTATAGCACTAGCACATAAGGTGGACACAGCAATTAATGATGGTTATTTGGCTGAGATTTTGGACCCAAAGGCTGGGAATTGGCCCGTTGAAGAGACGATGCAGTTGGCTGAATTGGGTATTAGCTGTGTGGAGCTTAGACGTAAAGATAGGCCGGATTTAAAGGACCAAGTACTTCCTGCTCTGGAGAGATTGAAGGATATTGCTTATACGGCTCAATCTTCGGTCTCTATTAGTCCGTGTCTAGCTCCTAGTCATTTCATTTGCCCAATTCGTAAAGATGTGATGAATGATCCATGTGTTGCTGCGGATGGATATACTTATGATAGGAGGGCGATTGAGAAGTGGTTGCAAGAGAATGATAAATCTCCAGTGACCAATTTGCCCTTGCCGAGTAAGAACTTATTACCGAACTACACACTTCTCTCGGCAATTATGGAATGGAACTCCAGGAAGAATTGA 2412 42.33 MDGKKLENAVAVAITGSGKSRILVKWCIEKFIPEGIVNFKLIHIYPKITSVPTPCKKCYAKKKKSGDSLPISKVRDDVAAAYKKEIEWQRSEKLLPYKKMLSHGKVVVDVVVIESDDLAHAISKEVANCNINKLVIGASSSSLFSRKTKGVVSSLISTCAPKFCTVYAISKGKLASIRSPELGNSITPTDLERNESIKDDASERSSTNSGSSYTSSAQTEYTEGVSVGSISLFSSSSLPFQRFQALSNINQTVLNKKVSSIEGNRSRSISLEIENKKPHSSDSSWRNLTEDQLSVSGESSTSEAFLNYGHSSSESQQNIEFELEKLRVELRHARGMYAIAQNETIDASRKLNDLNKRRMEEAKKLEEIKNKEENAKELARQEKHKLEATIREATYMKERAEREAFLKRDAEIKAMRDAKEKEKLKHALLGSSQQYQDFSWEEIESATSSFSEDLKIGFGAYGTVYKCSLHHTTAAVKVLHSPDCSKNKQFRQELEILSKIRHPHLLILLGACEDRSCLVYEYMENGSLEDRLFCKNRTPPIPWYERFRIAWEVASVLVFLHSSKPEPIIHRDLKPANILLDHNLLSKIGDVGLSTILNSNRSLSTANKESGVVGTFCYIDPEYQRTGILSPLSDVYAFGMVVLQLLTAKPVIALAHKVDTAINDGYLAEILDPKAGNWPVEETMQLAELGISCVELRRKDRPDLKDQVLPALERLKDIAYTAQSSVSISPCLAPSHFICPIRKDVMNDPCVAADGYTYDRRAIEKWLQENDKSPVTNLPLPSKNLLPNYTLLSAIMEWNSRKN 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6748632 6752779 + Conep15aG0089500.1 Cone15ag0879 454007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0879 803 Pfam Protein kinase domain 453 704 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0879 803 Gene3D Transferase(Phosphotransferase) domain 1 523 728 - -
Cone15ag0879 803 SUPERFAMILY Protein kinase-like (PK-like) 432 706 IPR011009 -
Cone15ag0879 803 MobiDBLite consensus disorder prediction 272 291 - -
Cone15ag0879 803 CDD RING-Ubox_WDSUB1-like 734 788 - -
Cone15ag0879 803 SUPERFAMILY RING/U-box 723 801 - -
Cone15ag0879 803 Pfam U-box domain 733 802 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cone15ag0879 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag0879 803 MobiDBLite consensus disorder prediction 185 218 - -
Cone15ag0879 803 Coils Coil 323 403 - -
Cone15ag0879 803 SMART Ubox_2 736 798 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cone15ag0879 803 ProSitePatterns Protein kinases ATP-binding region signature. 456 477 IPR017441 GO:0005524(InterPro)
Cone15ag0879 803 SMART serkin_6 450 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0879 803 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 733 803 IPR013083 -
Cone15ag0879 803 ProSiteProfiles U-box domain profile. 732 803 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cone15ag0879 803 ProSiteProfiles Protein kinase domain profile. 450 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0879 803 Gene3D Phosphorylase Kinase; domain 1 418 522 - -
Cone15ag0879 803 MobiDBLite consensus disorder prediction 203 218 - -
Cone15ag0879 803 CDD STK_N 10 172 - -
Cone15ag0879 803 PANTHER OS02G0152300 PROTEIN 10 795 IPR051348 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0879 Cone-Chr15:6748632 Cone16ag0333 Cone-Chr16:4250297 3.76E-128 dispersed
Cone14ag0900 Cone-Chr14:7213550 Cone15ag0879 Cone-Chr15:6748632 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82156 PF02365 NAM 1.10E-36 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0879 - - - 0.0