Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag0886 | ATGGCGCTGTTCAGAAAATTCCGTGAGCGGATCCTTCACACAAAGCCAGATGGTCTAGTCGAGATCTTTGAGAGGGTCTACGTATTCGATAGCTGCCTGTCTAAGGATGCAGTGAAGAGATCCGAATTCAAAGAATACTTGCATGGAATTGTACCGCAACTACATGACTTTTTTCCGGATGCTTCTTTCAGGGTGGTTAACTTCAGAGGAGTGGAAAAAAGGAGTCTGTTTTCAGAAATATTGACCACATATGAAATTAGTCTTGTGGATTACCCTCAAGAATTTGGGGGATGTCCTTTGCTGCCTTTGGAGATGATCGACCATTTCCTTCGATCTAGTGAAAGCTGGTTGTCTATAGGAAGGCGACAAAATGTTTTGTTAATGCATTGCGAAAGAGGAGCTTGGCCTGTCCTTGCTTTCATGCTTGCAGCTCTATGGGTCTCCATAAAACATGACTCTGCAAGTTTAGAGATACTTGAAATGGTCTACCAAAAAGCTCCCTTCGCGCTTCTCCAGTTTTGGTGTCCTTTAAACCCAAAGCCTTCTCAAGTGAGATATCTTCAATGTATATGGTCCAGACATTTTCTTTCTGATTGGCCTCCACCTGATATACATCTTTATATGGATTGTTTGATACTTAGAGACATACCTTTATTTGAAGGGAGACAAGAATTCAAGCCAGTTATACGCATTTATGGACAGAACCTGTTAACACCTGGTGATAGGAGTTCCAAGCTTTTGTTTTCAACCTCAAAATTCGAAAAGCATTTTCGCCACTACCTAATGGAAGAGTGTTGTATGCTGGTGAAAATTCATATCCATTTTCCTGTACAAGGTGATGTTTTTCTTGAATGTGCCCATCTGGATGGAGATCTACAACAAGAGTTGATGCTGTTCAGAGTTATGTTTCACACAGGTTTTCTGCAGCATTCACGTGCTTTGACTTTCCACAAAGACGAGGTTGACATGTCATGGGAAGCCATGGATCTCTTTCCTGAAGATTTTAGAGGAAAGGTACTTTTTGAGGATGTTGATGCTGTTACGTCCAGCCTCATATCCTATGAGGAAGAAAGTGCTTTATTTTGGGAATTATTTGAGGTAGAAGAGACCCTTAATAGGTTACTACTAGATGGAAAGATTGTTTTCGAGGAAGGTTATCAAAACGACATAGACAAACATAAAGAAGAGGATATTATTGGTGGAGTTTGTTCGAGTAGAATCCAGATGGAGCACTCGAAAAATGATGCGAATGACGACGGCTGTAGGGAGGGCAATGCTACAAATCTCAATGATCAAAGTACATCTACAACAAGTCAGAATTCTACTGCAACTTATGGAATTGGTTCGAGTACAACCCATATGGAGCACTCGAAAAATGATGCAAATGATGAAGGCTGTGGGGAGGGCAATGCTACAAATCTCAATGATCAAAGTACCTCTACAACAGGTCAGAATTCTACTGCAACTTATGGAATTGGTGGAGTTGGTTTGTGTAGAATCCAGATAGAGCACTCACAAAATAATGCGAATGATGAAGGCTGTAGGGAGGGAAATTCTACAAATCACAATGATCAAAGTACCTCTACAACAAGTCTGAATTCTACTGCAATTTATGGAATTGGTGGAGTTGGTTCAAATCAAATCCAGTTGGAGAACTCGAAAAACAAATTTAATTACGGGACAATGAGCAAAACTATTCACAATACTAACCATTACCCAACAGCGACGGCAATAGTCAGTGGGAAATCTTCTGTGGTTTCTACAATTGATGCAGTTGGATTAAGTACAATATTGAGGGACCATATAGAACTTAATTACAGACGCATAGGCGACGAAGTTACTCAAATGACTAATAAGTCAACAGAAAAGCCAGAAAAGGCAGACGAGATTAGTGGACAAAGTAAGAATCCTAGTATTACAACTACTAGTAATCCTGTAACTTTGGTAATTAGTCGCAGAAAGTTATTGTCATCTAAAACAGCATCAATGGACCCCGTTTCGTGTGCAACATATCGGATGGATCAAACTCTAGCGATATGCTTATATCTCACAAGGAAAATGATAAGCACGCAGTTATGGTTTCGAGGTTGTGGAATTGATTTAGCCAAAAGGTTAGGTCGTGGAGTCAAGTCGGGGAGAGTTCTAGGAGCATGCAAGTACATAAGAGGAGAGGTCTTATCATGGGTGAGTATTCAATCTTGTTTGAAATTTGGTTTTCCTTTACTTCTCTTTTTTGTGTGGAGAAGATTGTAA | 2253 | 40.12 | MALFRKFRERILHTKPDGLVEIFERVYVFDSCLSKDAVKRSEFKEYLHGIVPQLHDFFPDASFRVVNFRGVEKRSLFSEILTTYEISLVDYPQEFGGCPLLPLEMIDHFLRSSESWLSIGRRQNVLLMHCERGAWPVLAFMLAALWVSIKHDSASLEILEMVYQKAPFALLQFWCPLNPKPSQVRYLQCIWSRHFLSDWPPPDIHLYMDCLILRDIPLFEGRQEFKPVIRIYGQNLLTPGDRSSKLLFSTSKFEKHFRHYLMEECCMLVKIHIHFPVQGDVFLECAHLDGDLQQELMLFRVMFHTGFLQHSRALTFHKDEVDMSWEAMDLFPEDFRGKVLFEDVDAVTSSLISYEEESALFWELFEVEETLNRLLLDGKIVFEEGYQNDIDKHKEEDIIGGVCSSRIQMEHSKNDANDDGCREGNATNLNDQSTSTTSQNSTATYGIGSSTTHMEHSKNDANDEGCGEGNATNLNDQSTSTTGQNSTATYGIGGVGLCRIQIEHSQNNANDEGCREGNSTNHNDQSTSTTSLNSTAIYGIGGVGSNQIQLENSKNKFNYGTMSKTIHNTNHYPTATAIVSGKSSVVSTIDAVGLSTILRDHIELNYRRIGDEVTQMTNKSTEKPEKADEISGQSKNPSITTTSNPVTLVISRRKLLSSKTASMDPVSCATYRMDQTLAICLYLTRKMISTQLWFRGCGIDLAKRLGRGVKSGRVLGACKYIRGEVLSWVSIQSCLKFGFPLLLFFVWRRL | 750 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 6856989 | 6861134 | + | Conep15aG0090200.1 | Cone15ag0886 | 454014 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag0886 | 750 | Gene3D | - | 206 | 342 | - | - | |
| Cone15ag0886 | 750 | Pfam | C2 domain of PTEN tumour-suppressor protein | 202 | 343 | IPR014020 | - | |
| Cone15ag0886 | 750 | PANTHER | FORMIN-J | 1 | 565 | IPR051144 | - | |
| Cone15ag0886 | 750 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 204 | 344 | IPR035892 | - | |
| Cone15ag0886 | 750 | MobiDBLite | consensus disorder prediction | 421 | 455 | - | - | |
| Cone15ag0886 | 750 | MobiDBLite | consensus disorder prediction | 615 | 641 | - | - | |
| Cone15ag0886 | 750 | MobiDBLite | consensus disorder prediction | 466 | 486 | - | - | |
| Cone15ag0886 | 750 | ProSiteProfiles | C2 tensin-type domain profile. | 203 | 344 | IPR014020 | - | |
| Cone15ag0886 | 750 | SMART | PTEN_C2_2 | 201 | 343 | IPR014020 | - | |
| Cone15ag0886 | 750 | MobiDBLite | consensus disorder prediction | 412 | 486 | - | - | |
| Cone15ag0886 | 750 | Gene3D | Protein tyrosine phosphatase superfamily | 16 | 199 | IPR029021 | - | |
| Cone15ag0886 | 750 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 15 | 188 | IPR029021 | - | |
| Cone15ag0886 | 750 | MobiDBLite | consensus disorder prediction | 509 | 530 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone15ag0886 | Cone-Chr15:6856989 | Cone16ag0189 | Cone-Chr16:1212438 | 2.24E-129 | dispersed | |
| Cone15ag0895 | Cone-Chr15:6973659 | Cone15ag0886 | Cone-Chr15:6856989 | 4.49E-147 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag0886 | K28090 | - | gmx:100815515 | 405.601 |