Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0895 ATGGCGCTATTCAGAAGGTTCTTCTACAGAAAGCCGCCTGATCGGTTACTCGAGATCTCCGACAGGGTCTACGTGTTTGATCGCTGCTTCAAATCAGATGAATTGGAAGAACACGAGCTCAAAGAATACATGAGCGGCATAGTACCACAACTGCAGGACTTCTTTCCAGATGCATCTTTCATGGTCTTTAACTTCAGAGAAGGGGAGAGACAGAGCCAAATCTCCGACGTATTATCGGAATATGACATGACAGTTATGGATTATCCTCGACAATATGAGGGATGTCCTCTGCTCCCATTAGAGATGATCGGCCACTTTCTTCGGTCATGCGAAAGCTGGTTATGTCTAGAGGGGCAACATAATGTGGTGTTGTTGCATTGTGAAACAGGAGCTTGGCCTGTCCTTGCATTTATGATTACAGCTCTACTGTTGTACGGGAAACAGTTTAATGGGGAGAAAAAAACTCTTGAAATGATCTATAGGCAAGCTCCTAAGGAACTTCTCCGTCATTTGTCTCCTTTAGACCCACAACCTTCTCAACTAAGATATCTTTCGTATATCTCTAAGAGAAATATGTGTCCGGTTTGGCCTCCATCTGATATACTTCTATGTTTGGATTGTTTATTACTTAGAGTCCTACCTCTGTTTGAAGACGGACAAGGATGTAGGCCAATTATACGTATTTACGGACAGGATCCCTTAACTCCGGGTAATAGAAGCTCTAAGCTCCTGTTTTCAACTGCAAAAACCAAGAAACATGTTCACCATTATCTAGAGGCAGAGTGTATGCTGGTGAAAATTGAGATTCATTGCAGTGTACAAGGGGATGTTGTTCTAGAGTGCATCCATTTGCACGAAGATTTAGTACGTGAGGAGATGATTTTCAGAGTTATGTTTAACACGGCTTTTGTGCGTTCAAATATTCTGATGCTTAACCGGGAAGAGGTTGATGTTTTATGGGATGACAAGGATCAGTTTTCCAAGGAATTTAGAGCAGAGGTGCTGTTTTCGGATGGGGATGCTATTATGCCTAATTTAGCCACAGCTGTGACACATGATGAGGGGTTTGAGAAAGAATTTTCTTCGCTTGAGGAATTTGATGAGGTGGAAGAAATCTTCAACTATGTTGAATACGAGCAAGAAGTCAGGTCAGATAATGGCATTTATCAAAAGCCCCTTGAAAATGCAGCGGAAGATGATACAAACGACCATAAAGAGGAAGCCTCTACTTCTGTTGACGATGGGCATCTTTACAAGGAGACAAAATATATTTATGTGAATGAAGAGAGGGATATTATGATGGATGATGGGGATATCAAGTCAAATATAATTTTAGATAATTTTACTAAAGATAAAGGAAACGGGGAAGAAAATGCTGTGAATCGGAGCGATCAAACTACTTCGGGAGCAAGTGGGAACTCTAGTACTGCAATTTATGGAATAGGTGGGGTTGGTTCAAATACAATCCAGATGGAACATTCGAAGAACAAATTTAATTACGGAGAGATAACCAAAACTGTTCAAAAGAATTATTATTACTCTACAATGACTACAGTAACAAGTGGGCAACCTTCTACAGTTTCTGCTATCTGCCCAGTTGGTTCAAGCAAAATCCATGGGGACCACAAAGAAGATGGACTAGATCACGACAACGAAGGGTGCAGAGATGAAAATTCATCGAGAAAGTGGGTTAAGCAACATGTGTTGGGGAAGGTACGTTCGGTACAAGAGAGTGAAGCTATGGAACCAATAGAAGAGGGTAGTGAATCACTAGAAGAGCTGGTGACGGAAGTGGAGATGGGGGAGGCCCAAAAGGAAAAAGTGGACGAGATGAATGAGCAAAATGACATGCCTGGTAGTACTACTAGTAATTGTAAGACTTTGTTAATTAGCCGTAGAAAATTATTGTCATTTCGAACGATCTCAATGGACGTGGTTTCATCTCCAGCATATGCAAATGTTCCAACTCTATCTACACAAGAGGCTAGTGGTTGGCCTAGTATGAGTCGAATCAATATCAGAGGTTCAAAAAATGGAATCAACTATGAACGAGTCATCGTGTGTTTTCAAACTCATCTATCATCGTTTGTTGCAGAAGGAAAGGTAACCACGAAGTTGTGGATTCGAGGCTGTAGATTGGAGCTGGCCAGACTTTTAGAAGCCTACAGGTACATCAGAGCGAAGGAGGTCTCACCACGGGTTACTGTTGAAACATGCTTAGCATTTAGTTTTCCTTTACTTCTCTTTTTGTTATGGAGAAGAATATGGAAGTGA 2274 41.34 MALFRRFFYRKPPDRLLEISDRVYVFDRCFKSDELEEHELKEYMSGIVPQLQDFFPDASFMVFNFREGERQSQISDVLSEYDMTVMDYPRQYEGCPLLPLEMIGHFLRSCESWLCLEGQHNVVLLHCETGAWPVLAFMITALLLYGKQFNGEKKTLEMIYRQAPKELLRHLSPLDPQPSQLRYLSYISKRNMCPVWPPSDILLCLDCLLLRVLPLFEDGQGCRPIIRIYGQDPLTPGNRSSKLLFSTAKTKKHVHHYLEAECMLVKIEIHCSVQGDVVLECIHLHEDLVREEMIFRVMFNTAFVRSNILMLNREEVDVLWDDKDQFSKEFRAEVLFSDGDAIMPNLATAVTHDEGFEKEFSSLEEFDEVEEIFNYVEYEQEVRSDNGIYQKPLENAAEDDTNDHKEEASTSVDDGHLYKETKYIYVNEERDIMMDDGDIKSNIILDNFTKDKGNGEENAVNRSDQTTSGASGNSSTAIYGIGGVGSNTIQMEHSKNKFNYGEITKTVQKNYYYSTMTTVTSGQPSTVSAICPVGSSKIHGDHKEDGLDHDNEGCRDENSSRKWVKQHVLGKVRSVQESEAMEPIEEGSESLEELVTEVEMGEAQKEKVDEMNEQNDMPGSTTSNCKTLLISRRKLLSFRTISMDVVSSPAYANVPTLSTQEASGWPSMSRINIRGSKNGINYERVIVCFQTHLSSFVAEGKVTTKLWIRGCRLELARLLEAYRYIRAKEVSPRVTVETCLAFSFPLLLFLLWRRIWK 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6973659 6977017 - Conep15aG0091500.1 Cone15ag0895 454023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0895 757 MobiDBLite consensus disorder prediction 459 475 - -
Cone15ag0895 757 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cone15ag0895 757 Gene3D - 199 341 - -
Cone15ag0895 757 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Cone15ag0895 757 PANTHER FORMIN-J 1 624 IPR051144 -
Cone15ag0895 757 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 338 IPR035892 -
Cone15ag0895 757 MobiDBLite consensus disorder prediction 396 413 - -
Cone15ag0895 757 MobiDBLite consensus disorder prediction 448 475 - -
Cone15ag0895 757 Gene3D Protein tyrosine phosphatase superfamily 14 198 IPR029021 -
Cone15ag0895 757 MobiDBLite consensus disorder prediction 394 413 - -
Cone15ag0895 757 SMART PTEN_C2_2 198 338 IPR014020 -
Cone15ag0895 757 Pfam C2 domain of PTEN tumour-suppressor protein 201 338 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0895 Cone-Chr15:6973659 Cone16ag0189 Cone-Chr16:1212438 3.45E-195 dispersed
Cone15ag0895 Cone-Chr15:6973659 Cone15ag0886 Cone-Chr15:6856989 4.49E-147 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0895 K28090 - rcu:125369814 591.652