Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0967 ATGAAGGTGTTAAAGCAATTGATTGCTTGTTTGATTGCTCTTCCACTTCTTGTCATACCTACAGTTTTGTTCACACTTCTACCTCCAGGCTTTCAAAACCCTTCGCTGGATCTCTTCAGGGCTTCTAGGATAATTGCTAAATATGGCTCCGAAGAGGAAATTCCTAGAGACAAACTTCTTGGAGGACTTCTTGCTGTGGACCATAATGAAGAATCTTGCCTGAGCCGATACCAATCTAGCTTATACCGCAAAGCTTCCCCCTACGTACCTTCTTCTTATCTGGTGTCAAGATTGAGAAATTATGAAAATCTCCACAAAAATTGCGGCCCGGGTTCGCAGAACTACATTAAAATATCGGATAACCTCAAGTTAGGAAAAAATTTGACCTCAACAGAATGCAAGTATCTTGTGGTATTAACAAGAGATGGTCTTGGAAATAGAATGCTAACTGTGACTTCAGCTTTCCTTTATGCACTACTCACTAACCATGTCTTGCTTGTCGACCAAGGAAACGGCTTGGACGATCTATTTTGCGAACCCTTTCCAGAAAGATCATGGTTTCTACCAAGGGACTTTCCCCTAAAGGATCGGTTTCATCTTTTCAAGCCGTGGTTTCCTCAATCTTTTGGAAACATGCGGAAGAGCAATATGTCGGTAATCTCACCTGGGTCTAATACTTCGCAGTACTTATACCTCAATCTTGCTCATGATGCTGGTAACTATGATAACCTATTCTTCTGTGATCAAGACCAAGCTATTCTTAACAACATCCCCTTTTTGATAATGCAAACCAATAATTACTTTATCCCTGGTTTATTTCTTATGCCCTCTTTTAAAGATGAATTGACCAAACTTTTCCCTAGAAAAGACACTGCTTTCCACCATTTAGGCAGGTATCTTTTTCACCCCACAAATGAGGTATGGGGACTAGTTACAAGGTCATATGAAGCTTATTTAAGTCAAGCAGATGAGAAGATTGGAATTCAAATCCGAATCTACAAGTCGGAAGCCAATCAGTCCGAGAAACATATGGATCAAATTTTAAATTGTGTCCATAAAGAAAATTTGTTGCCAGAAGTCATAAATTCAGAAAACGAAAATATTATGAACAATACCATATCGACGAACCGAAAAGTGAAAACAGTGTTGATAACCTCGTTATATTCTCAATATCAAGAGAATCTGAAGAGCATCTACTTGGAACGTCCCACTAGAAATGGGGATATAATCCGTGTTTTCCAACCAAGCCATGAAGAGGTTCAAAAATCAAACAAATGGATGCATAATAGAAAAGCATGGGCAGAGGTTTATCTTCTTAGTTTATGTGATGTTTTGGTCACTAGTGCCTGGTCAACATTTGGGTATGTGGCTCAAGGGCTTGCTGGGGTGGAGCCATGGATTTTGTACAAGCCGGAAAGTTTGAAAGAAGGGCTAATCCAAAACAAGAAGGAAAGTTCTACTGGTCATAGTTTAGCTTGTGAAAGAGCAGTTTCTATGGAGCCTTGTTTTCATGCCCCTCCAGTTTGTGATTGCAGTGCAGTGACAAGATTTGATGCAGGGAAAGTGGTACCATATGTGAGGCATTGTGAGGATTGGAGCTTGGGTATTAAGCTCATTGATAGTGATTAA 1629 39.9 MKVLKQLIACLIALPLLVIPTVLFTLLPPGFQNPSLDLFRASRIIAKYGSEEEIPRDKLLGGLLAVDHNEESCLSRYQSSLYRKASPYVPSSYLVSRLRNYENLHKNCGPGSQNYIKISDNLKLGKNLTSTECKYLVVLTRDGLGNRMLTVTSAFLYALLTNHVLLVDQGNGLDDLFCEPFPERSWFLPRDFPLKDRFHLFKPWFPQSFGNMRKSNMSVISPGSNTSQYLYLNLAHDAGNYDNLFFCDQDQAILNNIPFLIMQTNNYFIPGLFLMPSFKDELTKLFPRKDTAFHHLGRYLFHPTNEVWGLVTRSYEAYLSQADEKIGIQIRIYKSEANQSEKHMDQILNCVHKENLLPEVINSENENIMNNTISTNRKVKTVLITSLYSQYQENLKSIYLERPTRNGDIIRVFQPSHEEVQKSNKWMHNRKAWAEVYLLSLCDVLVTSAWSTFGYVAQGLAGVEPWILYKPESLKEGLIQNKKESSTGHSLACERAVSMEPCFHAPPVCDCSAVTRFDAGKVVPYVRHCEDWSLGIKLIDSD 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7684974 7687267 + Conep15aG0098800.1 Cone15ag0967 454095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0967 542 PANTHER FUCOSYLTRANSFERASE 2-RELATED 50 541 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone15ag0967 542 Gene3D - 311 476 - -
Cone15ag0967 542 FunFam Galactoside 2-alpha-L-fucosyltransferase 131 182 - -
Cone15ag0967 542 Gene3D - 130 183 - -
Cone15ag0967 542 Pfam Xyloglucan fucosyltransferase 55 511 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0967 Cone-Chr15:7684974 Cone16ag0180 Cone-Chr16:1166158 1.33E-182 dispersed
Cone4ag0460 Cone-Chr4:2042425 Cone15ag0967 Cone-Chr15:7684974 1.88E-254 transposed
Cone14ag0975 Cone-Chr14:7989312 Cone15ag0967 Cone-Chr15:7684974 2.51E-217 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0967 K13681 - mdm:103455371 563.918