Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0967 ATGAAGGTGTTAAAGCAATTGATTGCTTGTTTGATTGCTCTTCCACTTCTTGTCATACCTACAGTTTTGTTCACACTTCTACCTCCAGGCTTTCAAAACCCTTCGCTGGATCTCTTCAGGGCTTCTAGGATAATTGCTAAATATGGCTCCGAAGAGGAAATTCCTAGAGACAAACTTCTTGGAGGACTTCTTGCTGTGGACCATAATGAAGAATCTTGCCTGAGCCGATACCAATCTAGCTTATACCGCAAAGCTTCCCCCTACGTACCTTCTTCTTATCTGGTGTCAAGATTGAGAAATTATGAAAATCTCCACAAAAATTGCGGCCCGGGTTCGCAGAACTACATTAAAATATCGGATAACCTCAAGTTAGGAAAAAATTTGACCTCAACAGAATGCAAGTATCTTGTGGTATTAACAAGAGATGGTCTTGGAAATAGAATGCTAACTGTGACTTCAGCTTTCCTTTATGCACTACTCACTAACCATGTCTTGCTTGTCGACCAAGGAAACGGCTTGGACGATCTATTTTGCGAACCCTTTCCAGAAAGATCATGGTTTCTACCAAGGGACTTTCCCCTAAAGGATCGGTTTCATCTTTTCAAGCCGTGGTTTCCTCAATCTTTTGGAAACATGCGGAAGAGCAATATGTCGGTAATCTCACCTGGGTCTAATACTTCGCAGTACTTATACCTCAATCTTGCTCATGATGCTGGTAACTATGATAACCTATTCTTCTGTGATCAAGACCAAGCTATTCTTAACAACATCCCCTTTTTGATAATGCAAACCAATAATTACTTTATCCCTGGTTTATTTCTTATGCCCTCTTTTAAAGATGAATTGACCAAACTTTTCCCTAGAAAAGACACTGCTTTCCACCATTTAGGCAGGTATCTTTTTCACCCCACAAATGAGGTATGGGGACTAGTTACAAGGTCATATGAAGCTTATTTAAGTCAAGCAGATGAGAAGATTGGAATTCAAATCCGAATCTACAAGTCGGAAGCCAATCAGTCCGAGAAACATATGGATCAAATTTTAAATTGTGTCCATAAAGAAAATTTGTTGCCAGAAGTCATAAATTCAGAAAACGAAAATATTATGAACAATACCATATCGACGAACCGAAAAGTGAAAACAGTGTTGATAACCTCGTTATATTCTCAATATCAAGAGAATCTGAAGAGCATCTACTTGGAACGTCCCACTAGAAATGGGGATATAATCCGTGTTTTCCAACCAAGCCATGAAGAGGTTCAAAAATCAAACAAATGGATGCATAATAGAAAAGCATGGGCAGAGGTTTATCTTCTTAGTTTATGTGATGTTTTGGTCACTAGTGCCTGGTCAACATTTGGGTATGTGGCTCAAGGGCTTGCTGGGGTGGAGCCATGGATTTTGTACAAGCCGGAAAGTTTGAAAGAAGGGCTAATCCAAAACAAGAAGGAAAGTTCTACTGGTCATAGTTTAGCTTGTGAAAGAGCAGTTTCTATGGAGCCTTGTTTTCATGCCCCTCCAGTTTGTGATTGCAGTGCAGTGACAAGATTTGATGCAGGGAAAGTGGTACCATATGTGAGGCATTGTGAGGATTGGAGCTTGGGTATTAAGCTCATTGATAGTGATTAA 1629 39.9 MKVLKQLIACLIALPLLVIPTVLFTLLPPGFQNPSLDLFRASRIIAKYGSEEEIPRDKLLGGLLAVDHNEESCLSRYQSSLYRKASPYVPSSYLVSRLRNYENLHKNCGPGSQNYIKISDNLKLGKNLTSTECKYLVVLTRDGLGNRMLTVTSAFLYALLTNHVLLVDQGNGLDDLFCEPFPERSWFLPRDFPLKDRFHLFKPWFPQSFGNMRKSNMSVISPGSNTSQYLYLNLAHDAGNYDNLFFCDQDQAILNNIPFLIMQTNNYFIPGLFLMPSFKDELTKLFPRKDTAFHHLGRYLFHPTNEVWGLVTRSYEAYLSQADEKIGIQIRIYKSEANQSEKHMDQILNCVHKENLLPEVINSENENIMNNTISTNRKVKTVLITSLYSQYQENLKSIYLERPTRNGDIIRVFQPSHEEVQKSNKWMHNRKAWAEVYLLSLCDVLVTSAWSTFGYVAQGLAGVEPWILYKPESLKEGLIQNKKESSTGHSLACERAVSMEPCFHAPPVCDCSAVTRFDAGKVVPYVRHCEDWSLGIKLIDSD 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7684974 7687267 + Conep15aG0098800.1 Cone15ag0967 454095

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0967 542 PANTHER FUCOSYLTRANSFERASE 2-RELATED 50 541 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone15ag0967 542 Gene3D - 311 476 - -
Cone15ag0967 542 FunFam Galactoside 2-alpha-L-fucosyltransferase 131 182 - -
Cone15ag0967 542 Gene3D - 130 183 - -
Cone15ag0967 542 Pfam Xyloglucan fucosyltransferase 55 511 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0967 K13681 - - mdm:103455371 563.918
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0967 Cone-Chr15:7684974 Cone16ag0180 Cone-Chr16:1166158 1.33E-182 dispersed
Cone4ag0460 Cone-Chr4:2042425 Cone15ag0967 Cone-Chr15:7684974 1.88E-254 transposed
Cone14ag0975 Cone-Chr14:7989312 Cone15ag0967 Cone-Chr15:7684974 2.51E-217 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cone13ag0939 . 92 573 Xyloglucan Fucosyltransferase1 AT1G14080 54.9 8.0e-160 561.2
Cone2ag0834 . 90 573 Xyloglucan Fucosyltransferase1 AT1G14080 54.0 7.5e-150 528.1
Cone16ag0180 . 90 572 Xyloglucan Fucosyltransferase1 AT1G14080 53.0 3.1e-148 522.7
Cone13ag0939 . 95 574 Xyloglucan Fucosyltransferase1 AT1G14100 55.9 5.7e-163 571.6
Cone16ag0180 . 94 572 Xyloglucan Fucosyltransferase1 AT1G14100 57.7 3.1e-161 565.8
Cone2ag0834 . 94 573 Xyloglucan Fucosyltransferase1 AT1G14100 57.1 2.0e-160 563.1
Cone14ag0976 . 47 542 Xyloglucan Fucosyltransferase1 AT1G14100 50.9 9.4e-142 501.1
Cone15ag0967 . 56 542 Xyloglucan Fucosyltransferase1 AT1G14100 50.6 4.4e-139 492.3
Cone4ag0460 . 46 543 Xyloglucan Fucosyltransferase1 AT1G14100 50.3 2.8e-138 489.6
Cone13ag0939 . 91 575 Xyloglucan Fucosyltransferase1 AT1G14110 50.2 2.9e-137 486.1
Cone2ag0834 . 91 572 Xyloglucan Fucosyltransferase1 AT1G14110 51.3 6.6e-134 474.9
Cone16ag0180 . 91 571 Xyloglucan Fucosyltransferase1 AT1G14110 51.0 8.7e-134 474.6
Cone12ag1085 . 1 520 Xyloglucan Fucosyltransferase1 AT1G49710 65.0 8.9e-193 670.6
Cone3ag1179 . 1 523 Xyloglucan Fucosyltransferase1 AT1G49710 62.3 5.1e-180 628.2
Cone10ag0987 . 1 521 Xyloglucan Fucosyltransferase1 AT1G49710 61.7 5.3e-177 618.2
Cone4ag1204 . 1 403 Xyloglucan Fucosyltransferase1 AT1G71990 71.8 1.8e-172 602.8
Cone7ag0922 . 1 420 Xyloglucan Fucosyltransferase1 AT1G71990 66.2 3.4e-163 572.0
Cone13ag0939 . 5 572 Xyloglucan Fucosyltransferase1 AT2G03210 56.3 2.4e-186 649.4
Cone2ag0834 . 75 572 Xyloglucan Fucosyltransferase1 AT2G03210 56.1 7.7e-169 591.3
Cone16ag0180 . 100 571 Xyloglucan Fucosyltransferase1 AT2G03210 58.1 2.2e-163 573.2
Cone13ag0938 . 58 480 Xyloglucan Fucosyltransferase1 AT2G03210 52.1 5.7e-140 495.4
Cone15ag0967 . 59 541 Xyloglucan Fucosyltransferase1 AT2G03210 52.2 9.7e-140 494.6
Cone14ag0976 . 47 541 Xyloglucan Fucosyltransferase1 AT2G03210 51.3 5.9e-137 485.3
Cone14ag0975 . 8 330 Xyloglucan Fucosyltransferase1 AT2G03210 52.0 3.9e-96 349.7
Cone13ag0939 . 1 571 Xyloglucan Fucosyltransferase1 AT2G03220 58.6 5.0e-197 684.9
Cone16ag0180 . 32 570 Xyloglucan Fucosyltransferase1 AT2G03220 59.6 4.1e-191 665.2
Cone2ag0834 . 22 571 Xyloglucan Fucosyltransferase1 AT2G03220 58.9 1.2e-190 663.7
Cone13ag0938 . 8 479 Xyloglucan Fucosyltransferase1 AT2G03220 52.8 6.8e-154 541.6
Cone15ag0967 . 1 539 Xyloglucan Fucosyltransferase1 AT2G03220 51.9 4.4e-153 538.9
Cone14ag0976 . 1 538 Xyloglucan Fucosyltransferase1 AT2G03220 50.2 4.1e-151 532.3
Cone14ag0975 . 1 328 Xyloglucan Fucosyltransferase1 AT2G03220 56.2 1.1e-103 374.8
Cone13ag0939 . 103 573 Xyloglucan Fucosyltransferase1 AT2G15350 52.7 1.9e-150 530.0
Cone2ag0834 . 94 572 Xyloglucan Fucosyltransferase1 AT2G15350 51.1 2.4e-145 513.1
Cone16ag0180 . 94 571 Xyloglucan Fucosyltransferase1 AT2G15350 50.9 6.5e-143 505.0
Cone13ag0939 . 103 573 Xyloglucan Fucosyltransferase1 AT2G15370 52.2 2.1e-144 510.0
Cone13ag0939 . 103 573 Xyloglucan Fucosyltransferase1 AT2G15390 52.6 8.8e-151 531.2
Cone2ag0834 . 98 573 Xyloglucan Fucosyltransferase1 AT2G15390 52.3 9.4e-145 511.1
Cone16ag0180 . 98 572 Xyloglucan Fucosyltransferase1 AT2G15390 51.8 2.7e-144 509.6
Cone12ag1085 . 1 520 Xyloglucan Fucosyltransferase1 AT3G19280 64.8 5.7e-192 667.9
Cone3ag1179 . 1 523 Xyloglucan Fucosyltransferase1 AT3G19280 61.6 3.4e-181 632.1
Cone10ag0987 . 1 521 Xyloglucan Fucosyltransferase1 AT3G19280 61.5 3.8e-180 628.6
Cone13ag0939 . 5 572 Xyloglucan Fucosyltransferase1 AT2G03210 56.3 2.4e-186 649.4
Cone2ag0834 . 75 572 Xyloglucan Fucosyltransferase1 AT2G03210 56.1 7.7e-169 591.3
Cone16ag0180 . 100 571 Xyloglucan Fucosyltransferase1 AT2G03210 58.1 2.2e-163 573.2
Cone13ag0938 . 58 480 Xyloglucan Fucosyltransferase1 AT2G03210 52.1 5.7e-140 495.4
Cone15ag0967 . 59 541 Xyloglucan Fucosyltransferase1 AT2G03210 52.2 9.7e-140 494.6
Cone14ag0976 . 47 541 Xyloglucan Fucosyltransferase1 AT2G03210 51.3 5.9e-137 485.3
Cone14ag0975 . 8 330 Xyloglucan Fucosyltransferase1 AT2G03210 52.0 3.9e-96 349.7
Cone13ag0939 . 1 571 Xyloglucan Fucosyltransferase1 AT2G03220 58.6 5.0e-197 684.9
Cone16ag0180 . 32 570 Xyloglucan Fucosyltransferase1 AT2G03220 59.6 4.1e-191 665.2
Cone2ag0834 . 22 571 Xyloglucan Fucosyltransferase1 AT2G03220 58.9 1.2e-190 663.7
Cone13ag0938 . 8 479 Xyloglucan Fucosyltransferase1 AT2G03220 52.8 6.8e-154 541.6
Cone15ag0967 . 1 539 Xyloglucan Fucosyltransferase1 AT2G03220 51.9 4.4e-153 538.9
Cone14ag0976 . 1 538 Xyloglucan Fucosyltransferase1 AT2G03220 50.2 4.1e-151 532.3
Cone14ag0975 . 1 328 Xyloglucan Fucosyltransferase1 AT2G03220 56.2 1.1e-103 374.8
Cone13ag0939 . 5 572 Xyloglucan Fucosyltransferase1 AT2G03210 56.3 2.4e-186 649.4
Cone2ag0834 . 75 572 Xyloglucan Fucosyltransferase1 AT2G03210 56.1 7.7e-169 591.3
Cone16ag0180 . 100 571 Xyloglucan Fucosyltransferase1 AT2G03210 58.1 2.2e-163 573.2
Cone13ag0938 . 58 480 Xyloglucan Fucosyltransferase1 AT2G03210 52.1 5.7e-140 495.4
Cone15ag0967 . 59 541 Xyloglucan Fucosyltransferase1 AT2G03210 52.2 9.7e-140 494.6
Cone14ag0976 . 47 541 Xyloglucan Fucosyltransferase1 AT2G03210 51.3 5.9e-137 485.3
Cone14ag0975 . 8 330 Xyloglucan Fucosyltransferase1 AT2G03210 52.0 3.9e-96 349.7
Cone13ag0939 . 103 573 Xyloglucan Fucosyltransferase1 AT2G15390 52.6 8.8e-151 531.2
Cone2ag0834 . 98 573 Xyloglucan Fucosyltransferase1 AT2G15390 52.3 9.4e-145 511.1
Cone16ag0180 . 98 572 Xyloglucan Fucosyltransferase1 AT2G15390 51.8 2.7e-144 509.6
Cone13ag0939 . 103 573 Xyloglucan Fucosyltransferase1 AT2G15370 52.2 2.1e-144 510.0
Cone13ag0939 . 92 573 Xyloglucan Fucosyltransferase1 AT1G14080 54.9 8.0e-160 561.2
Cone2ag0834 . 90 573 Xyloglucan Fucosyltransferase1 AT1G14080 54.0 7.5e-150 528.1
Cone16ag0180 . 90 572 Xyloglucan Fucosyltransferase1 AT1G14080 53.0 3.1e-148 522.7
Cone13ag0939 . 95 574 Xyloglucan Fucosyltransferase1 AT1G14100 55.9 5.7e-163 571.6
Cone16ag0180 . 94 572 Xyloglucan Fucosyltransferase1 AT1G14100 57.7 3.1e-161 565.8
Cone2ag0834 . 94 573 Xyloglucan Fucosyltransferase1 AT1G14100 57.1 2.0e-160 563.1
Cone14ag0976 . 47 542 Xyloglucan Fucosyltransferase1 AT1G14100 50.9 9.4e-142 501.1
Cone15ag0967 . 56 542 Xyloglucan Fucosyltransferase1 AT1G14100 50.6 4.4e-139 492.3
Cone4ag0460 . 46 543 Xyloglucan Fucosyltransferase1 AT1G14100 50.3 2.8e-138 489.6
Cone13ag0939 . 91 575 Xyloglucan Fucosyltransferase1 AT1G14110 50.2 2.9e-137 486.1
Cone2ag0834 . 91 572 Xyloglucan Fucosyltransferase1 AT1G14110 51.3 6.6e-134 474.9
Cone16ag0180 . 91 571 Xyloglucan Fucosyltransferase1 AT1G14110 51.0 8.7e-134 474.6
Cone13ag0939 . 103 573 Xyloglucan Fucosyltransferase1 AT2G15350 52.7 1.9e-150 530.0
Cone2ag0834 . 94 572 Xyloglucan Fucosyltransferase1 AT2G15350 51.1 2.4e-145 513.1
Cone16ag0180 . 94 571 Xyloglucan Fucosyltransferase1 AT2G15350 50.9 6.5e-143 505.0
Cone12ag1085 . 1 520 Xyloglucan Fucosyltransferase1 AT3G19280 64.8 5.7e-192 667.9
Cone3ag1179 . 1 523 Xyloglucan Fucosyltransferase1 AT3G19280 61.6 3.4e-181 632.1
Cone10ag0987 . 1 521 Xyloglucan Fucosyltransferase1 AT3G19280 61.5 3.8e-180 628.6
Cone12ag1085 . 1 520 Xyloglucan Fucosyltransferase1 AT1G49710 65.0 8.9e-193 670.6
Cone3ag1179 . 1 523 Xyloglucan Fucosyltransferase1 AT1G49710 62.3 5.1e-180 628.2
Cone10ag0987 . 1 521 Xyloglucan Fucosyltransferase1 AT1G49710 61.7 5.3e-177 618.2
Cone4ag1204 . 1 403 Xyloglucan Fucosyltransferase1 AT1G71990 71.8 1.8e-172 602.8
Cone7ag0922 . 1 420 Xyloglucan Fucosyltransferase1 AT1G71990 66.2 3.4e-163 572.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 2 2 2 2 1 1 0 36