Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0981 ATGGGATTTTTTCGAGCAATATTTGTTCTTGCATTGTCGTCAACCATGTTCATCCCAGGATCTTACTCAACTAATTTCACAATCACAAATAATTGTCCTTTCACGATTTGGCCCGGAATCCTAACCGGTGCAGGCAAACCACAGTTATCAACCACCGGATTCGAGTTAGCCTCCAAAGCTTCATCATTAATCGACATTCCTCAAAACTGGTCTGGCCGTGTGTGGGCCCGATCCCAGTGCTCCACTGACTCTTCCGGAAAGTTTATCTGCGGCACAGCAGACTGTGCTTCAGGCCATATATCATGCAACGGAGCAGGTGCAATCCCACCTGCCTCCCTAGCCGAATTTACCCTCTCAGGTTGGGGAGGGCAAGATTTTTACGATGTTAGCCTTGTTGATGGGTTCAACCTCCCCGTGTCAATAACCCCGCAAGGTGGTCCAACCAGGTGCAACTCAACCAATTGTCCGGCCAATATTAACCTCGTTTGCCCGGCAGAATTGGCCATGAATGGATCTAGTGGAGATGTTATTGCATGCAAGAGTGCATGTCTGGCGTTGAACAAACCGGAGTATTGTTGTAGCGGAGAATTTGATACGCCGGATAAATGCCCCCCTACTGATTATTCCAAGATCTTTAAGACATCATGCCCTCAAGCTTACAGTTATGCTTATGATGATAGATCTAGTACTTTTACATGTAGCAGTGGAGCAAACTATGCAATTACCTTTTGTCCATTGATATCTTAG 747 46.18 MGFFRAIFVLALSSTMFIPGSYSTNFTITNNCPFTIWPGILTGAGKPQLSTTGFELASKASSLIDIPQNWSGRVWARSQCSTDSSGKFICGTADCASGHISCNGAGAIPPASLAEFTLSGWGGQDFYDVSLVDGFNLPVSITPQGGPTRCNSTNCPANINLVCPAELAMNGSSGDVIACKSACLALNKPEYCCSGEFDTPDKCPPTDYSKIFKTSCPQAYSYAYDDRSSTFTCSSGANYAITFCPLIS 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7837065 7837972 + Conep15aG0100200.1 Cone15ag0981 454109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0981 248 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Cone15ag0981 248 SMART tha2 26 245 IPR001938 -
Cone15ag0981 248 Pfam Thaumatin family 30 245 IPR001938 -
Cone15ag0981 248 CDD TLP-PA 26 244 - -
Cone15ag0981 248 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Cone15ag0981 248 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Cone15ag0981 248 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Cone15ag0981 248 PRINTS Pathogenesis-related protein signature 235 244 IPR001938 -
Cone15ag0981 248 PANTHER OS03G0233200 PROTEIN 15 245 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
Cone15ag0981 248 Gene3D Thaumatin 24 245 IPR037176 -
Cone15ag0981 248 PIRSF PR5 2 247 IPR001938 -
Cone15ag0981 248 FunFam THAUMATIN-LIKE PROTEIN 1 24 245 - -
Cone15ag0981 248 ProSiteProfiles Thaumatin family profile. 23 245 IPR001938 -
Cone15ag0981 248 SUPERFAMILY Osmotin, thaumatin-like protein 25 245 IPR037176 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0985 Cone-Chr14:8127054 Cone15ag0981 Cone-Chr15:7837065 1.73E-136 dispersed
Cone15ag0981 Cone-Chr15:7837065 Cone3ag0233 Cone-Chr3:1245906 3.11E-107 dispersed
Cone15ag0981 Cone-Chr15:7837065 Cone10ag0210 Cone-Chr10:1032311 8.22E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0981 - - - 0.0