Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0984 ATGGAATTCAAGGATAATCAGTGCGATTTGAATCACTCCGATCCAGTTCTTATCACTGACGTTTCTTGTCAACAGCAGCAGCAGCAGCAGCAGCAGCAGATTTCCGCTGCCTTCTCTAACTATACTAACCCTAAATCACCGAGCTCTGAAACTTCAAATTCGATGGCCGATCATGATTTTTCCATTTCTGACCCAAATAAAGGAAATTCTATGTTAAGATTCTCCCTGACATCTCCTGATTTGGTTATCTGTTCTGGTTCCCCTGAGTTTATGAACGTTAAGTATCAAAAGGCAATGGAGTCTTCCATGGAACTTTCTTTTGAAAATGGATTGAGTGAAACTGAAGTTAAGGGAAAGAAAAATTCTCCATATGTCAAGTTTTCCACAGTGTTCCAGACCTATAAGGAAGAACCATCTCCGGAAGCATCCTTTGAGCTCCCTCCTCCCCCAGAGATTAGAGATAGTTTGACTGAAGCTCCCTCAAATACTGACGAGGTTAAGCTTCTTAAAGTCAAGGGTCCATGTGAAGAGGCGAAATGTGAGCTGGCAAATGATTGCGGTGAATTAAATGTAGAAGAAGAATATCAGAAGCTCCAAAAGGATTACGAGAATCAGAAAATTGAACTAGAAGAGGCAAGGAGGGTTTTAGCGGAACTCAAGAGGGAAAACCATCAGAAGAGTAGGGAATGCCAAGAAGCTTGGAAGTCATTACAGGACCTCCAAAACGAGCTCATGCGCAAGTCAATGCATGTTGGATCCTTGGCTTTCGCGATTGAAGGACAAGTGAAGGAGAAGAGCAGATGGTTTTCATCATTGAGAGATCTGACAAGAAAACTGAAGATACTAAAAATGGAACACATTAAGCTATTGGAGGAGGCACAGGCTTATAAGAAGCATCTTACAGATATGAATGAAATAAGGTTTACTATAGAGTCTACACTAAAGCACCAAGTAGACTTACATGAAGACCTTAAGTATAAATTTATTAAAGGGGCCAAGGAACAGAAAGAACTTTATAATAAGTTTTTGGAGTTAAAAGGAAATATTAGGGTCTTTTGCCGGTGTAGGCCTCTAAACACTGAAGAACTTGCTACTGGAGCTTCTATGGCTATTGATTTTGAATTAGCTAAAGACGGTGAGCTCACTGTAAAGTCTAATGGGGCTTTTAAAAGATCATTTAAATTTGATGCCGTGTTTGGCCCCCAGGCAAATCAAGGTGATGTTTTTGAAGATACAGCTCCATTTGCAACCTCAGTTTTGAATGGCTACAATGTCTGCATCTTTGCCTATGGCCAAACCGGAACCGGAAAAACTTTTACAATGGAGGGGACAGAAGACGCTCGTGGAGTCAACTTTAAGATGCTTGACGAACTATTTTGCTTGATTAGCGATCGACAGAAGCTCTATCGGTATAATGTTTCTGTAAGCGTCTTAGAAGTCTACAATGAGCAAATAAGAGACTTGCTTCTAGGAGGAACTCAGCCTATGGTGGCTGCAAAAAGGCTTGAAGTAAGGCAAGTGGGTGAAGGAATCCATCATATTCCTGGCCTGGTTGAGGCACCTGTAAACAACATGAGTGAAGTCTGGGAAGTTCTACAAACCGGCAGTAATGCAAGGGCTGTTAGCTCCACTAATGCTAATGAGCACAGCAGTCGATCCCATTGTATACACTGTGTGATGGTGAAGGGAGAGAATTTGCTCAATGGGGAATGTACAAGCAGCAAGCTATGGCTGGTGGATCTGGCTGGAAGTGAGCGAATTGCAAAGTCGGAAGTTCAGGGAGAACGACTCAAGGAAACCCAAAATATTAATAGATCTCTGTCTGCACTTGGTGATGTCATATCTGCTCTTGCAACTAAGAGTCCACACGTTCCTTTCAGGAATTCAAAGCTGACCCACTTGCTTCAAGACTCTTTAGGCGGACATTTAAAAACACTCATGTTTGTACAGATCAGTCCTAATGAAAATGATTTAGGGGAGAGCCTTTGCTCGCTAAACTTTGCAAGTAGGGTGAGAGGAATTGAATTGGGTCCAGCAAAGAGGCAATTCGACACATCTGAACTTCTCAAATTCAAGCAGATGAATGAGAAAACCAAGCAAGACATGAAGAGTACAGATCTGCAGATGAAAAAGATGGAGGAAACAATCAATTGTTTAGACTTAAAGATAAAGGAAAAAGATCTTAAAAACAAAAATCTGCAAGACAAGATAAAAGAACTTGAAGCTCAACTCTTAATAGAGAGAAAGCTTGCACGTCAACATGTAGATACAAGAATAGCAGAACAACACCAAATCAAACAACAAGAAGAAGACCAAAACACGTTGCCGGTAAGACCAAGACAAGCAAACCGGCTGTTAGGAAATTACAAGAATCTCTTCAGTGAACCAGTTAATAAAAGTGCTCTAGTCAAAGACCAAGTAAATCTCAATCAACCTTTAACAGAGAACAAAGCCTTGTACAAACCCGCATTCAGCCAACCACAAACAAATGCTTTCCTCAAATACATGGAGTCCACAGAGAAGGAGAATAATCCCGAGTTGGCCGAACAGCAACCATTAATTCTACTACCAAAGAGGACAGGACGAGCCTCTATTTGCCCAATGGCCATGCGGATCCCACCAGTTCCGGTTCCAAGGAGAATATCTCTAATCCCACTCCCAAGTCTGACTCAGCTCCCTCTACAATATGACAAGATAGAAGATAGAGATGAACTGGAAACAAGCCATTTTCCGGAAGAGAATCCATGTGAGAGTCCAAAAGTAGTGAAATATGGAGCCAAGAAGCTGTGCAGTGTGCTAAGAAGCCTTCAGAAGGGAACTCAGATGAAATCGCCTAGACAACAATATATGAGAAAAGGTGGGGTCAATGTGGGGACGGAGAAGCTGAGGATTTCTATCGGTAGTAGAGGGAGGATGGGACATAGAGTGTTGCTCGGAAATGGTAGAAGAGGTAGTAAAAAAGAAGCTCAGAATAATAATAATAACAATGGTAACACTAAACAGAGTCGGAAAGAGAAGGAGAGGGGATGGAATATCGGAACAACTTTGGTTAAAACTGCTACGAATAGCTGA 3072 41.67 MEFKDNQCDLNHSDPVLITDVSCQQQQQQQQQQISAAFSNYTNPKSPSSETSNSMADHDFSISDPNKGNSMLRFSLTSPDLVICSGSPEFMNVKYQKAMESSMELSFENGLSETEVKGKKNSPYVKFSTVFQTYKEEPSPEASFELPPPPEIRDSLTEAPSNTDEVKLLKVKGPCEEAKCELANDCGELNVEEEYQKLQKDYENQKIELEEARRVLAELKRENHQKSRECQEAWKSLQDLQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLTRKLKILKMEHIKLLEEAQAYKKHLTDMNEIRFTIESTLKHQVDLHEDLKYKFIKGAKEQKELYNKFLELKGNIRVFCRCRPLNTEELATGASMAIDFELAKDGELTVKSNGAFKRSFKFDAVFGPQANQGDVFEDTAPFATSVLNGYNVCIFAYGQTGTGKTFTMEGTEDARGVNFKMLDELFCLISDRQKLYRYNVSVSVLEVYNEQIRDLLLGGTQPMVAAKRLEVRQVGEGIHHIPGLVEAPVNNMSEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTSSKLWLVDLAGSERIAKSEVQGERLKETQNINRSLSALGDVISALATKSPHVPFRNSKLTHLLQDSLGGHLKTLMFVQISPNENDLGESLCSLNFASRVRGIELGPAKRQFDTSELLKFKQMNEKTKQDMKSTDLQMKKMEETINCLDLKIKEKDLKNKNLQDKIKELEAQLLIERKLARQHVDTRIAEQHQIKQQEEDQNTLPVRPRQANRLLGNYKNLFSEPVNKSALVKDQVNLNQPLTENKALYKPAFSQPQTNAFLKYMESTEKENNPELAEQQPLILLPKRTGRASICPMAMRIPPVPVPRRISLIPLPSLTQLPLQYDKIEDRDELETSHFPEENPCESPKVVKYGAKKLCSVLRSLQKGTQMKSPRQQYMRKGGVNVGTEKLRISIGSRGRMGHRVLLGNGRRGSKKEAQNNNNNNGNTKQSRKEKERGWNIGTTLVKTATNS 1023
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7877535 7882654 + Conep15aG0100500.1 Cone15ag0984 454112

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0984 1023 Pfam Kinesin motor domain 354 674 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0984 1023 Coils Coil 695 750 - -
Cone15ag0984 1023 ProSiteProfiles Kinesin motor domain profile. 348 674 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0984 1023 SMART kinesin_4 346 682 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0984 1023 PRINTS Kinesin heavy chain signature 575 593 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0984 1023 PRINTS Kinesin heavy chain signature 422 443 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0984 1023 PRINTS Kinesin heavy chain signature 624 645 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0984 1023 PRINTS Kinesin heavy chain signature 544 561 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0984 1023 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 897 IPR027640 GO:0003777(InterPro)|GO:0007017(PANTHER)|GO:0007018(InterPro)|GO:0008017(PANTHER)|GO:0015630(PANTHER)
Cone15ag0984 1023 MobiDBLite consensus disorder prediction 968 1023 - -
Cone15ag0984 1023 FunFam kinesin-like protein KIN-14R 293 676 - -
Cone15ag0984 1023 Coils Coil 188 229 - -
Cone15ag0984 1023 MobiDBLite consensus disorder prediction 985 999 - -
Cone15ag0984 1023 ProSitePatterns Kinesin motor domain signature. 574 585 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cone15ag0984 1023 Gene3D Kinesin motor domain 343 718 IPR036961 -
Cone15ag0984 1023 CDD KISc_C_terminal 346 676 - -
Cone15ag0984 1023 Coils Coil 272 292 - -
Cone15ag0984 1023 MobiDBLite consensus disorder prediction 39 62 - -
Cone15ag0984 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 348 712 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0984 K27887 - - mdm:103401215 1216.45
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0984 Cone-Chr15:7877535 Cone8ag0202 Cone-Chr8:1062345 9.62E-169 dispersed
Cone14ag0991 Cone-Chr14:8184744 Cone15ag0984 Cone-Chr15:7877535 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g956 . . . . Bpe09g00290 . . Bma13g00898 Cmo16g00505 . . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0984 . . . . . Blo10g00686 . . . . . . . . . Cma04g00636 Cma16g00466 Car04g00595 Car16g00421 . Cpe01g00574 . . . . . . . Cla07g01010 Cam07g1087 Cec07g1159 Cco07g1137 Clacu07g1061 Cmu07g1052 Cre07g1428 . . Chy07g01045 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003005 3 2 3 3 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 2 1 2 47