Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0990 ATGGCGAAGAAGGTGATACTCTTGGACTTCTGGCCGAGTATGTTTGGGATGAGAGCAAGAATAGCACTAAATGAGAAGGGGGTCGAGTATGAGGCCAAGGAAGAGGATTTGAGGAACAAAAGCCCTTTGCTTCTCCAGATGAACCCGGTTCACAAGAAGGTTCCGGTCCTTATTCATAATGGAAAACCGGTCCGTGAATCCCTCATCATTGTGCAGTATGTTGATGAAACCTGGAAGGGTAGTTCTCCCTTGCTCCCTTCTGATCCTTATCAGAGAGCTCAAGCCAGATTCTGGGCTGATTTCATTGATCAGAAGTTTTTTCTTGCTTCATTGAAGTTATGGGCAAGGACAGGAGAAGAGCACGAGGAAGGCAAGCAGGAATTCATAGAGAGTCTCGAGCAATTAGAAGGAGTTCTTGGAAACAAACCCTTCTTTGGGGGAGAAAACTTAGGCTTTGTTGACATCGCTTTGCTCGGTTTCTATCCCTGGTTTCATGCCTTTGAAAAGTTTGGAAACTTGAGCATTGAAGCTCATAGTCCCAATTTGATTAAATGGGCTAAGAGGAGCCATCGGAGGGAGAGTGTATCCAAGGCTTCACCTGATCCGGACATGGTTTATGACTATATTGTAGGACTTAGGAAGAGATTCGGTTTGGAGTAG 660 45.3 MAKKVILLDFWPSMFGMRARIALNEKGVEYEAKEEDLRNKSPLLLQMNPVHKKVPVLIHNGKPVRESLIIVQYVDETWKGSSPLLPSDPYQRAQARFWADFIDQKFFLASLKLWARTGEEHEEGKQEFIESLEQLEGVLGNKPFFGGENLGFVDIALLGFYPWFHAFEKFGNLSIEAHSPNLIKWAKRSHRRESVSKASPDPDMVYDYIVGLRKRFGLE 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7962898 7964485 + Conep15aG0101100.1 Cone15ag0990 454118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0990 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cone15ag0990 219 FunFam Glutathione S-transferase U20 88 219 - -
Cone15ag0990 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Cone15ag0990 219 FunFam Tau class glutathione S-transferase 1 87 - -
Cone15ag0990 219 Gene3D Glutaredoxin 1 87 - -
Cone15ag0990 219 SFLD Main (cytGST) 2 217 - -
Cone15ag0990 219 Pfam Glutathione S-transferase, C-terminal domain 120 188 - -
Cone15ag0990 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cone15ag0990 219 Gene3D - 88 219 - -
Cone15ag0990 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cone15ag0990 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 208 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cone15ag0990 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cone15ag0990 219 SUPERFAMILY Thioredoxin-like 4 107 IPR036249 -
Cone15ag0990 219 CDD GST_N_Tau 5 78 - -
Cone15ag0990 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0993 Cone-Chr14:8223914 Cone15ag0990 Cone-Chr15:7962898 2.61E-118 dispersed
Cone15ag0990 Cone-Chr15:7962898 Cone5ag0275 Cone-Chr5:1165211 7.40E-90 dispersed
Cone15ag0988 Cone-Chr15:7921791 Cone15ag0990 Cone-Chr15:7962898 2.26E-112 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0990 K00799 - vvi:100261799 317.005