Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1009 ATGGGAAGCATGAAAACTCTGATATTGAGAAATTGTAACATTACTGGAGAACTGCCTGATTATCTAGGGGGAGTAGACTCTTTGAGCTCCCTAGACCTCAGTTTTAACAGATTAAGTGGTCAAATTCCAGATAACTTTATTAATGTTGGAGAAGTTAAATATCTATATTTAACTGGGAATATGTTAAGTGGGGTAGTGCCTTCTTGGATGCTGAAAACAAAGAAGAACATTGATATCTCTTATAACAACTTCAATGCATCTCCGGCCTGCCAACAAGTGAACTCAGGGAACGTAAATTTGTTTGCTGGATCTGTCAAGGGGAATGACTTTGCATGTTTGAATAACTCTCATTGTCCAAAAAAGTATTACTCTCTCCATATAAATTTTGGTGGAAAGGAACAAGTGGTTAACAGAACTACATACTATGAAGACGCGATCAAAGCTACTGCTTCATCTTTTTCCGAAGGTAAACCGAATTGGGCAATAAGCAACACAGGTGATTTCTTGGACGATGACAGCAGTACAGACATCTATATCGCGACAAATTCATCAAGACTTTTTACGGTCCATCCCGAGTTATATACCACTGCACGCCTTTCTCCGCTCACAATGACTGTTTACGGCTTCTGTCTCGGAAATGGAAACTACACAGTACGTCTCCATTTTGCAGAGATTATGTTCACAGAAGGCAAATCCTATAGCAGCCTTGGTAGACGCATATTTGATGTTTATATTCAGGGAAATCAGGTTCTTAAGGATTTCAATATCGCCGATGAAGCAGGCGGTGTCGGTAAGGCAGTGACCAAAACATTTACTATTACAGTGACTAATAGTACTCTGGCGATTCGTTTCTATTGGGCTGGGAAGGGGACAAATGCAATACCAACTAGAGGAGTCTATGGTCCTCTAATTTCAGCCATTTCAGTTGATCCTGACTTCGAACCTCCGGCAGAAAGTGGAAATAGCATATCAGCAGGTGCAATTGTCGGTATTGTAGCTGTAGGGGTTGTCGTTCTAGCATTGGCTCTAGGTATTTTATGGTGGATCGGTTGCATATGGAAGAAAAAGAAAATGCAACAAGATCTAAAGGGTTTAGACCTACAAACTTGTTCATATACGTTAAGGCAACTCAAAGCTGCTACAAACAACTTTGACAGAGCTAATAAGATCGGTGAAGGTGGCTTTGGTTCTGTCTATAAGGGTTTTCTAGCGGATGGGACAATAATTGCTGTCAAAAAGCTTTCATCCAAATCGAAGCAAGGAAACCGTGAGTTCGTAAATGAGATAGGCATGATGACTGCTTTACAACACCCTAATCTTGTTAAGCTTTATGGGTGTTGTATAGAAGGAGATGAGTTATTATTAGTTTATGAATACATGGAGAATAATAGCCTCGCCCGGGCACTACTTGGAAGATTCAAGGAGGAGAAACTTTTGGACTGGCCAACTAGATACAAAATAGCAGTAGGTGCTGCAAGAGGGATAGCATACCTTCACCATGATTGCATCCCTCATATCATACATAGAGATATCAAGTCAAGCAACATACTCTTGGACCAAAACATGGAGGCTCGAGTTTCGGATTTCGGGTTAGCCACCTTGATGGAACCTGATAAGACCCATGTCTCGACATATGTGGCCGGAACCTTTGGATACTTGGCTCCTGAATACTTTGACACGGGAAGAGCAACGGCAAAAGGGGATGTTTACAGCTTTGGAGTCGTTTTACTAGAGCTTCTTACCGGCAAAAAACCAAGCGACGAGGCTTTCATCGAAGAGGGGACCAAGCTAGTGACTTGGGTGAAGACAGTTGTGAGGGAGAAGAGGGAAGAGTATGAAGTAGACAGCAGCTTAGGATGCTGTCCAGTTGATGAGATCAACAGCGTGTTCAGTATTGCCTTAATGTGCCTAGAACCTGAACCCTCGAAGAGGCCAACTATGGTTGAGGTTGTCAAGATGCTTGAGCATATTGAATCAGACAGAATTGTATAA 1992 41.92 MGSMKTLILRNCNITGELPDYLGGVDSLSSLDLSFNRLSGQIPDNFINVGEVKYLYLTGNMLSGVVPSWMLKTKKNIDISYNNFNASPACQQVNSGNVNLFAGSVKGNDFACLNNSHCPKKYYSLHINFGGKEQVVNRTTYYEDAIKATASSFSEGKPNWAISNTGDFLDDDSSTDIYIATNSSRLFTVHPELYTTARLSPLTMTVYGFCLGNGNYTVRLHFAEIMFTEGKSYSSLGRRIFDVYIQGNQVLKDFNIADEAGGVGKAVTKTFTITVTNSTLAIRFYWAGKGTNAIPTRGVYGPLISAISVDPDFEPPAESGNSISAGAIVGIVAVGVVVLALALGILWWIGCIWKKKKMQQDLKGLDLQTCSYTLRQLKAATNNFDRANKIGEGGFGSVYKGFLADGTIIAVKKLSSKSKQGNREFVNEIGMMTALQHPNLVKLYGCCIEGDELLLVYEYMENNSLARALLGRFKEEKLLDWPTRYKIAVGAARGIAYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMEPDKTHVSTYVAGTFGYLAPEYFDTGRATAKGDVYSFGVVLLELLTGKKPSDEAFIEEGTKLVTWVKTVVREKREEYEVDSSLGCCPVDEINSVFSIALMCLEPEPSKRPTMVEVVKMLEHIESDRIV 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8168530 8293101 - Conep15aG0103000.1 Cone15ag1009 454137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1009 663 ProSitePatterns Protein kinases ATP-binding region signature. 390 413 IPR017441 GO:0005524(InterPro)
Cone15ag1009 663 Gene3D - 121 311 - -
Cone15ag1009 663 Gene3D Phosphorylase Kinase; domain 1 350 459 - -
Cone15ag1009 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1009 663 Pfam Leucine rich repeat 4 62 IPR001611 GO:0005515(InterPro)
Cone15ag1009 663 Gene3D Ribonuclease Inhibitor 1 100 IPR032675 -
Cone15ag1009 663 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 122 312 - -
Cone15ag1009 663 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 353 459 - -
Cone15ag1009 663 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 460 662 - -
Cone15ag1009 663 SUPERFAMILY Protein kinase-like (PK-like) 369 657 IPR011009 -
Cone15ag1009 663 Pfam Malectin domain 124 307 IPR021720 -
Cone15ag1009 663 SUPERFAMILY L domain-like 4 88 - -
Cone15ag1009 663 ProSiteProfiles Protein kinase domain profile. 384 657 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1009 663 Pfam Protein kinase domain 386 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1009 663 SMART serkin_6 384 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1009 663 Gene3D Transferase(Phosphotransferase) domain 1 460 661 - -
Cone15ag1009 663 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 655 IPR051824 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1009 Cone-Chr15:8168530 Cone3ag1470 Cone-Chr3:33310787 1.03E-201 dispersed
Cone8ag0259 Cone-Chr8:1498559 Cone15ag1009 Cone-Chr15:8168530 1.61E-49 dispersed
Cone9ag1263 Cone-Chr9:9346800 Cone15ag1009 Cone-Chr15:8168530 1.07E-73 dispersed
Cone15ag1009 Cone-Chr15:8168530 Cone15ag1011 Cone-Chr15:8308745 3.25E-180 proximal
Cone1ag0216 Cone-Chr1:1314311 Cone15ag1009 Cone-Chr15:8168530 9.97E-76 wgd
Cone14ag1027 Cone-Chr14:8568692 Cone15ag1009 Cone-Chr15:8168530 4.54E-178 wgd
Cone15ag1009 Cone-Chr15:8168530 Cone6ag0206 Cone-Chr6:969913 3.39E-183 wgd
Cone15ag1009 Cone-Chr15:8168530 Cone9ag0212 Cone-Chr9:902408 8.78E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82159 PF02902 Peptidase_C48 1.30E-30 CL0125 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1009 - - - 0.0