Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1011 ATGTATGACAGAATTCAAAAAGGTCTCAATTTGACTGGAGTTCTACCAGAAGAATTTGTAAATCTTACTCAGTTACAAGAACTTGATCTTACTCGAAACTATATCAACGGATCAATACCGGCAAGTTTCTCGCAGATTGCTCTTCTCAAACTTTTACTCTTGGGAAACCGGCTTAGCGGTCCGATTCCTACAGAAATTGGTAACATCCTCTCACTTCAAGAGTTGGTCTTAGAAGATAATCAACTAAGCGGAAGCTTGCCCGAAAGCCTTGGAAATTTGAGCAACTTGACTAGACTGCTTCTATCGGCAAACAATTTTTCGGGACAAATACCGGAATCATTTGGGAAGCTAAAGAACTTAGAAGATTTTCGGATAGATGGGAGTGCGATTTCCGGGAAGATACCCGAATTTATCGGGAACTGGACAAAAATTACGAGACTGGATATGCAAGGAACATCATTGGAGAACCCCATTCCTTCTTCAATATCTCTGCTGCAAAATTTAGATCAACTGAGAATAACTGATCTAAAGGGGTCATCTACAAATTTTCCAAATTTGACAGCAATGATTAATATGGAAGAATTGGTCCTAAGGAATTGCTTAATTGAAGACACGATCCCTGATTATATTCAACAAATGACTACATTAAAAACTTTGGATTTAAGCTTCAACATGTTGACCGGTCCAATTCCGGAAATGCTTCAAACCCTACTTCAGGACAACAAACTTGAGTACTTATTCCTTACCAACAACTCATTAACCGGGGAAGTACCGAGTTGGATATTAAACAGCAAAGAGAACATTGATTTGTCTTACAACAATTTCTCCGGTTCGTCAGTGTTAAGTTGCCAACAAGCAGCTGTGAATTTAGCTTCTAGTTTTTCTTCTACAGCGAATGATCAAGACATTTCTTGGTGTCTCAAGAAAGACCTTAAATGCTCCGGGAAACCGAAATATCATTCTTTGTTTATTAATTGTGGAGGATCAAAAATGGTGATTGACGGGAATGAATATGAGGAGGACTTAACAAAAGACGGAATATCAAACTTCTTTTCCGTTTCTGAAAAATGGGGCTATAGTAGTACTGGAGTCTACTTGGGCAAGGACAAAGCTGGTTTCATAGCAACAAATGATAATCTTTTCCGTCTGAATCTCACCGGCCAAAGTTTCTATGGAACTGCCCGGCTTGCCCCACTCTCCCTCAAGTACTATGGCCTTTGCTTGATAGAGGGAAGTTACAATGTGAAGCTCCATTTTGCTGAAATAATGTATTCAAATGACCAAAACTTTAGCAGCCTTGGCAATCGTATTTTCGATATTTCCATCCAAGGGAATTTAGTTAAGAAGGATTTCAATATAATGGAGGCGGCAGGAGTGGTTGGAAATGGCACCGTAGTTGAAGAAAAGAGTGTCTATGTTGATGGAACTACTCTGGAGATCCATTTATATTGGGCGGGAAAAGGAACGACGGCAATTCCCGATAGAGGAGTATATGGACCTCTTATCTCAGCCATCACAGTCACATCAAACTTTGAAGTCGATAATGGAGGAATATCGGGTGGAGCTATTGCCGGCATTGTGATTGGTTTGTTAGTGCTAGCTGTTATTATAATCGCATATCTCCGAATTAAAGGATACTTATGCTGGAAAGATATTGAAGATGAAGAAATGCGGGCCCTAGATTTGCAGACAGGTTATTTCACTTTGAGACAAATTAAAGCTGCCACTGGCAACTTTGATCCTTCAAATAAGATCGGCGAAGGAGGTTTTGGGCCAGTATACAAGGGTGTTCTCTCAGATGGTGCTTTAATTGCCGTTAAGCAACTATCCTCCAAATCAAAGCAAGGCAACCGTGAATTTGTGACAGAAATTGGCATGATATCTGCATTGCAACACCCAAATCTTGTCCGGCTTTATGGTTGTTGTATAGAGGGAAACCAGCTCTTGCTTATATATGAATACATGGAAAATAATAGTCTTGCCCGAGCGCTTTTCGGCCGTGATGATCAAAGATTAAACTTAGACTGGCCGACGAGAAAGAAGATATGCTTGGGGATAGCAAGAGGATTGGCATATCTTCACGATGAATCGAGATTAAAGATTGTTCATAGAGACATAAAGGCTACTAATGTGTTGCTTGATAAGATTCTTAATGCCAAAATATCGGATTTTGGTTTGGCTAAGCTTGATGAAGAGGAGAACACCCACATAAGCACGCGAATTGCCGGGACTGTAGGTTATATGGCGCCCGAATATGCAATGAGAGGTTACCTAACTGATAAGGCAGATGTTTATAGCTTTGGAATTGTTGCTTTAGAGATTGTTAGCGGGAAAAGCAATACGAATTACAGGCCAAAAGAGGAGTTTGTTTATCTGCTTGATTGGGCTTATGTTCTACAAGAACAAGGGAACATTCTTGACCTAATGGATCCAATTCTTGATTCAAAGTACTCAAAAGAAGAAGTTTTGAGGATGCTCGATGTAGCTCTCTTGTGCACCAACCCATCTCCCACTCTTAGACCATCCATGACTTCTGTAGTGAGTATGCTTGAAGGCAAGATTCCGGTACAACCACCCATCATTAAGCTCAATTCATCTCAACAACCTGATGCTCGATTTAAGGCCTTCGAGAAGTTAATGCAAGAGAGCCAAACGTTTGTCTCAACATCATCACAAGAGAGTCAAGTGTTGCGGAAAAGTATGTCGATTGAAGGGCCGTGGGTTGACTCTTCAATCTCTATTCAGAGTAAGGATAAGGTGGTTGATTATTCTTCATCTAGTACGCTCCTTAAGGGTCTTTATGATGGCGATTTGGATTGA 2820 40.46 MYDRIQKGLNLTGVLPEEFVNLTQLQELDLTRNYINGSIPASFSQIALLKLLLLGNRLSGPIPTEIGNILSLQELVLEDNQLSGSLPESLGNLSNLTRLLLSANNFSGQIPESFGKLKNLEDFRIDGSAISGKIPEFIGNWTKITRLDMQGTSLENPIPSSISLLQNLDQLRITDLKGSSTNFPNLTAMINMEELVLRNCLIEDTIPDYIQQMTTLKTLDLSFNMLTGPIPEMLQTLLQDNKLEYLFLTNNSLTGEVPSWILNSKENIDLSYNNFSGSSVLSCQQAAVNLASSFSSTANDQDISWCLKKDLKCSGKPKYHSLFINCGGSKMVIDGNEYEEDLTKDGISNFFSVSEKWGYSSTGVYLGKDKAGFIATNDNLFRLNLTGQSFYGTARLAPLSLKYYGLCLIEGSYNVKLHFAEIMYSNDQNFSSLGNRIFDISIQGNLVKKDFNIMEAAGVVGNGTVVEEKSVYVDGTTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTSNFEVDNGGISGGAIAGIVIGLLVLAVIIIAYLRIKGYLCWKDIEDEEMRALDLQTGYFTLRQIKAATGNFDPSNKIGEGGFGPVYKGVLSDGALIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVRLYGCCIEGNQLLLIYEYMENNSLARALFGRDDQRLNLDWPTRKKICLGIARGLAYLHDESRLKIVHRDIKATNVLLDKILNAKISDFGLAKLDEEENTHISTRIAGTVGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNILDLMDPILDSKYSKEEVLRMLDVALLCTNPSPTLRPSMTSVVSMLEGKIPVQPPIIKLNSSQQPDARFKAFEKLMQESQTFVSTSSQESQVLRKSMSIEGPWVDSSISIQSKDKVVDYSSSSTLLKGLYDGDLD 939
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8308745 8314100 + Conep15aG0103200.1 Cone15ag1011 454139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1011 939 Pfam Protein tyrosine and serine/threonine kinase 583 846 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1011 939 Pfam Leucine Rich Repeat 216 237 IPR001611 GO:0005515(InterPro)
Cone15ag1011 939 Pfam Leucine Rich Repeat 95 117 IPR001611 GO:0005515(InterPro)
Cone15ag1011 939 Pfam Leucine Rich Repeat 242 263 IPR001611 GO:0005515(InterPro)
Cone15ag1011 939 Pfam Leucine Rich Repeat 71 93 IPR001611 GO:0005515(InterPro)
Cone15ag1011 939 Pfam Leucine Rich Repeat 24 45 IPR001611 GO:0005515(InterPro)
Cone15ag1011 939 SMART serkin_6 579 850 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1011 939 FunFam Inactive leucine-rich repeat receptor-like protein kinase 15 111 - -
Cone15ag1011 939 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 548 654 - -
Cone15ag1011 939 Pfam Malectin domain 322 505 IPR021720 -
Cone15ag1011 939 Gene3D Transferase(Phosphotransferase) domain 1 655 857 - -
Cone15ag1011 939 Gene3D Ribonuclease Inhibitor 139 314 IPR032675 -
Cone15ag1011 939 Gene3D Phosphorylase Kinase; domain 1 548 654 - -
Cone15ag1011 939 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 112 177 - -
Cone15ag1011 939 CDD STKc_IRAK 585 852 - -
Cone15ag1011 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1011 939 Gene3D - 320 511 - -
Cone15ag1011 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 876 IPR051824 -
Cone15ag1011 939 Gene3D Ribonuclease Inhibitor 71 138 IPR032675 -
Cone15ag1011 939 Gene3D Ribonuclease Inhibitor 6 70 IPR032675 -
Cone15ag1011 939 ProSiteProfiles Protein kinase domain profile. 579 860 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1011 939 SUPERFAMILY L domain-like 9 276 - -
Cone15ag1011 939 SUPERFAMILY Protein kinase-like (PK-like) 563 866 IPR011009 -
Cone15ag1011 939 FunFam Putative LRR receptor-like serine/threonine-protein kinase 655 862 - -
Cone15ag1011 939 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 319 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1027 Cone-Chr14:8568692 Cone15ag1011 Cone-Chr15:8308745 0 dispersed
Cone15ag1011 Cone-Chr15:8308745 Cone9ag0235 Cone-Chr9:991865 0 dispersed
Cone15ag1009 Cone-Chr15:8168530 Cone15ag1011 Cone-Chr15:8308745 3.25E-180 proximal
Cone15ag1011 Cone-Chr15:8308745 Cone15ag1012 Cone-Chr15:8316159 1.17E-185 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82160 PF05498 RALF 7.90E-30 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1011 - - - 0.0