Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1012 ATGCCCTTCAAGTTCAGAATTCTTCATGCTATCCTTTTCGGGTCTCTGATTTTGATATTAATTTCCGACGCTCAACTCCTGCCTGAAGATGAAGTTAAAACCCTTCAAGTAATTTTCTCCAAGCTGGGCTTCAATGGGAGTGTTACTCGAAGCTCTTGCCACAGCGGATATGTCTTCGTTAATATTACAGACACAGAAGAAAGAAATGTCACTTGTAATTGTCCCTCCAGCTCAACTGTTTGCCATGTCACCGGCATAATTCTAAAACGTCTCAATTTGAGAGGAGTTCTACCAGTTGAATTTGGAGATCTTACTCAGTTACAAGAACTTGATCTTACTCGAAACTATATCAGCGGATCGATACCGGCAAGTTTCTCGCAGATTGCTCTTCTCAAACTTTTACTCTTGGGAAACCGGCTTAGCGGTCCGATTCCTACAGAAATTGGTAACATCCTCTCACTTCAAGAGTTGGTCTTAGAAGATAATCAACTAAGCGGAAGCTTGCCCGAAAGCCTTGGAAATTTGAGCAACTTGACTAGACTGCTTCTTACAGCGAACAATTTTTCGGGAAAAATACCGAATTCATTTGGGAAGCTAAAGAACTTAGACGATTTTCGGATAGATGGGAATCCGATTACCGGGCAGATACCTGAATTTATCGGGAGCTGGACAAAAATTACGAGACTGGATATGCAAGGAACATCATTGGAGAACCCCATTCCTTCTTCAATATCTCTGCTCGAAAATTTAATGGAACTGAGAATAACTGATCTGAAGGGATCATCTATAAGGTTACCTGATCTTACAAGAATGATTAGAATGGAACGATTGGTCCTAAGGAATTGCTTAATTGAAGACATGATCCCGGATAATTATACTCAACATATGACTGGGTTAAAAACTTTGGATTTGAGCTTCAACATGTTGACCGGTCCAATTCCGGATACTCTTGAAACTCAACTTAAGAACATTAACTACCTATTCCTTACCAACAACTCACTGACCGGGAAAGTACCGATTTGGATAATAAACAGCGGAAGGAACATTGACTTGTCTTACAACAATTTCACGATTTCGTCTGCGTCTAGTTGCCAACAAGCAGCTGTGAATTTAGCTTCTAGTTTTTCTCCTGCAGCGAATGATTCAAAAATTCCTTGGTGTCTCAAGAAGGATCTTAAATGTGAGAAACCCAAATACTTTGGAACGGGATTCTCCAATGGAGCTATCGCCGGCATAGTGGTTGGTTCATGTGTGCTAGTTGTTCTTATAATCGCATTTCTCCGGTTTAAAGGCTACTTATGCTGGAAGGATATTGAAGATAATGAATTGCGTGGCCTAGATTTGCGGACAGGTTATTTCAGTTTGAGACAAATTAAAGCTGCCACTGGCAACTTTAATCCTTCGAATAAGATAGGGGAAGGAGGTTTCGGGTCAGTGTACAAGGGTGTTCTCTCAGATGGTGCTGTAATCGCCATTAAGCAACTATCCTCCAAATCAAAGCAAGGCAACCGTGAATTTGTTACAGAAATCGGCATGATATCTGCATTACAACACCCGAATCTTGTTCGGCTTCATGGTTGTTGTATAGAAGGAAACCAGCTCTTGCTTATATATGAATACATGGAAAATAATAGTCTTGCCCGTGCGCTTTTCGGTGGAGAAAGTAATAGTATTCAATTCAATTGGGAAACAAGGCGTAAAATATGCATCGGAGTTGCAAAGGGTCTTGCATTCCTTCACGAGGAAGTTAAGCCTCATATCATCCATCGAGACATCAAAGCAAGCAATATCCTTCTTGACAAAGATCTAGTTCCCAAAATCTCAGATTTCGGCCTTGCAAAGCTTATGCCGCCTGAATGGACCCATATTAGCACCCGTGTTGCCGGAACGACAGGTTATCTGGCACCCGAATATGCCATACGTGGTCAAGTGACAAGAAAGGCTGATATTTACAGTTTCGGCATCTTGCTCCTTGAAATTGTTTGTGGAAGGTCTAACACCGTTAGAAGGTTTCTTTCTGATGATAAATCTCTTCTTGAAGAGGTATGGGAGCTTCATGAGAGGGGGATGTTAGTTAAATTAGTTGACTCATCAGTGAAAGGAGATCTTGATCTTGACGAGGCTTGTAGATTTCTAAAGATTGGGCTTCTATGCACCCAAGACTTACCGAAACTCCGGCCAGTCATGTCAACTGTGGCCCAAATGTTACTGGGTGAGATCGATGTGGATGGTATGACGATATCTGAGCCGGGAATGGTTCCAAGGCCCACGGCTCATGGTGTTGGGGCCCTCAAGAAAGAAGTAGTTGAGACTGAGGGTTCTTCTTCTACGGCAGGTTCCGGGGGGAAGTTGAATGATTCATCTTCTTCGTCGGGGAATACTGCCACCACTTCCTTTGCTACCATGACCTTCAGTTCGATTTTCGATCGGAGATAA 2436 42.32 MPFKFRILHAILFGSLILILISDAQLLPEDEVKTLQVIFSKLGFNGSVTRSSCHSGYVFVNITDTEERNVTCNCPSSSTVCHVTGIILKRLNLRGVLPVEFGDLTQLQELDLTRNYISGSIPASFSQIALLKLLLLGNRLSGPIPTEIGNILSLQELVLEDNQLSGSLPESLGNLSNLTRLLLTANNFSGKIPNSFGKLKNLDDFRIDGNPITGQIPEFIGSWTKITRLDMQGTSLENPIPSSISLLENLMELRITDLKGSSIRLPDLTRMIRMERLVLRNCLIEDMIPDNYTQHMTGLKTLDLSFNMLTGPIPDTLETQLKNINYLFLTNNSLTGKVPIWIINSGRNIDLSYNNFTISSASSCQQAAVNLASSFSPAANDSKIPWCLKKDLKCEKPKYFGTGFSNGAIAGIVVGSCVLVVLIIAFLRFKGYLCWKDIEDNELRGLDLRTGYFSLRQIKAATGNFNPSNKIGEGGFGSVYKGVLSDGAVIAIKQLSSKSKQGNREFVTEIGMISALQHPNLVRLHGCCIEGNQLLLIYEYMENNSLARALFGGESNSIQFNWETRRKICIGVAKGLAFLHEEVKPHIIHRDIKASNILLDKDLVPKISDFGLAKLMPPEWTHISTRVAGTTGYLAPEYAIRGQVTRKADIYSFGILLLEIVCGRSNTVRRFLSDDKSLLEEVWELHERGMLVKLVDSSVKGDLDLDEACRFLKIGLLCTQDLPKLRPVMSTVAQMLLGEIDVDGMTISEPGMVPRPTAHGVGALKKEVVETEGSSSTAGSGGKLNDSSSSSGNTATTSFATMTFSSIFDRR 811
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8316159 8456768 + Conep15aG0103300.1 Cone15ag1012 454140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1012 811 SMART serkin_6 465 729 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1012 811 CDD STKc_IRAK 471 736 - -
Cone15ag1012 811 MobiDBLite consensus disorder prediction 769 795 - -
Cone15ag1012 811 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 434 540 - -
Cone15ag1012 811 SUPERFAMILY Protein kinase-like (PK-like) 450 736 IPR011009 -
Cone15ag1012 811 MobiDBLite consensus disorder prediction 770 795 - -
Cone15ag1012 811 Gene3D Phosphorylase Kinase; domain 1 436 540 - -
Cone15ag1012 811 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524(InterPro)
Cone15ag1012 811 Gene3D Ribonuclease Inhibitor 44 151 IPR032675 -
Cone15ag1012 811 Gene3D Ribonuclease Inhibitor 152 220 IPR032675 -
Cone15ag1012 811 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 53 753 IPR051824 -
Cone15ag1012 811 Gene3D Ribonuclease Inhibitor 221 398 IPR032675 -
Cone15ag1012 811 Pfam Leucine Rich Repeat 177 199 IPR001611 GO:0005515(InterPro)
Cone15ag1012 811 Pfam Leucine Rich Repeat 106 127 IPR001611 GO:0005515(InterPro)
Cone15ag1012 811 Pfam Leucine Rich Repeat 153 175 IPR001611 GO:0005515(InterPro)
Cone15ag1012 811 Pfam Leucine Rich Repeat 299 318 IPR001611 GO:0005515(InterPro)
Cone15ag1012 811 FunFam Inactive leucine-rich repeat receptor-like protein kinase 97 193 - -
Cone15ag1012 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1012 811 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 194 259 - -
Cone15ag1012 811 ProSiteProfiles Protein kinase domain profile. 465 725 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1012 811 FunFam Putative LRR receptor-like serine/threonine-protein kinase 541 748 - -
Cone15ag1012 811 Pfam Protein kinase domain 467 665 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1012 811 Gene3D Transferase(Phosphotransferase) domain 1 541 744 - -
Cone15ag1012 811 SUPERFAMILY L domain-like 72 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1012 Cone-Chr15:8316159 Cone9ag0235 Cone-Chr9:991865 3.03E-183 dispersed
Cone1ag1347 Cone-Chr1:56531822 Cone15ag1012 Cone-Chr15:8316159 8.35E-57 dispersed
Cone15ag1011 Cone-Chr15:8308745 Cone15ag1012 Cone-Chr15:8316159 1.17E-185 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82161 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1012 - - - 0.0