Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag1098 | ATGATGTTATCAACCTCGCCTTCGACCTTAGCACGGAGCTCTCTGGAAGAAATGCTGGAGTCGCTCCGGCGAAGAGATGAAATCGAAAAGCCCAAGGACTTACCGCCTGCATTGCCGGCCCGGCCCACTTTAAAGGGCCGGCTTCCTCTGGCTCGCCGATCTTTGCCTAACAACTTCAGGGTGAGTGATATAGGCCCATTGGAAGGCTTATCAGGTGGGTTTAATGTGAATGGGGAGATAAAAAGGGAAGAGAAGGATTTAGGAAACAAGGGAAGTAGCATTTGGAGCAAGAAAGTGAAGAGAGATCAAAATGATAAATCGCCATACTCTATTCCGGCTTTAGCTTCTGATTCGGATTGGGATGATTACATTGGTTATTTCATCAAGAAGAAACTCCGAGTTTGGTGTAGGCTTCAAAATGGGCCATGGGAATCCGGAACAATACAATCAACAGTTGAGGAGGAAGCATTTGTCTCACTCTTTAATGGAAATGTTGTTAAGGTATCAAAAGGGGAGCTTTTTCCTGCTAATCTGGATATTCTGAATGGGGTTGATGATCTTACATGGCTTAGTCATTTGAATGAACCATCTGCTCTTTGCAATCTTCGGCAGAGATATTCTCAGGATAAGATTTATAGTAAGGTGGGGCCAGTACTTATTGCGGTCAATCCGTTTAGAGAAGTGAAACTTTATGGAAGCGAATTAGTCACGGGTTATAGGCAGAAGCTCATAGACAGCCCTCACGTTTATGCCGTAGCTGATGATGCTTATAATCAAATGATGAAAGCTGATGTCGATCAATCCATACTAATAAGCGGAGAAAGTGGAGCTGGGAAAACAGAGACAGCAAAAGTTGTTATACAATACTTGGCTGCTCTTGGTGGGGCTGATTCTGGGATAGATAATAGAATCCTTCATGCAAATTGTATTTTAGAAGCCTTTGGGAGTGCCAAGACGTCTAGGAATGACGATTCCAGCCGATTTGGGAAGTTGATTGAAATTCATTTTAGCACAATGGGGAAGATATGTGGTGCTAAAATTCAAACCCTTATGTTAGAAAGGTCGAGAGTTGTCGAGCTAAGTAGCGATGAAAGGTCATTCCATATTTTTTATCAGCTTTGTGCTGGTGCTCCTCCTAACCTTCGAGAGACTCTTAACCTTAAGACGGCTAGCGAGTACAAGTATCTTAACCAGAGTGAATGCATGGCAATTGATGGTGTTGATGATGCGAAGAAATTCCATGTTCTTATGGAAGCCTTAGACATCATCCAAATTCACAAGGAAGATCAAAACTATGTATTTACTCTTCTTGCTGCAGTGCTATGGATAGGAAATGTATCATTTAAAGTCATTGACAGCGATAATCATGTTGAGGTTCTGGCTGATGAAGCTCTAAAGAATGCAACTCAATTGATGGGTTGCAGTTCTCGAGACCTTATCTCAATTTTATCAACCCAAAGTCTGAAGAAATTGACATTGAATCAGGCCACTTTTAAAAGAAATGCATTGGCGAGATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAATCAATAATTCTCTTGGGGTGAGAAAATGCCAGTCGGGAAATTCCATACATCTACTGGATATATGTGGTTTTGGATCATTTAAGAAAAATAAATTTGAACAATTTTGTATAAATTATGCAAATGAGAGGCTTCAACAACATTTCAGCCAGCATCTGTTAAAACTTCCGCAAGAGGACTATGAATTTGATGGGGTGGATTGGAATAGAGTTGATTTTGAAGATAACCAAGAGTGCCTAAATCTGATTGAGAAGAAGCCTCTAGGACTGCTAGCTTTGTTGGATGAGGAGTCCAAGTCGGACGATGCTACTGATCTGACTTTCACAAATAAACTTAAGCATCACTTGAGTGCTCATCCTTCTTTTAAAGAAGAAAAAAGCAGGGCTTTTGGTATTCACCATTATGCTGGAGAGGTCCTATATGATACAAATGGGTTCCTGGAAGAGAACAGAGATCAATTGCAGTCTGATTCTATCTCACTGCTTTCATCCTGTAGTGCTAAACTTCTTCAGTCGTTTGCCTCGAAAACGAATAGTAGTTCCCAAAAACAAAGTGTCAGTATGCACCTTAAGGAGCAACTTTTTAAATTGATGCATCATTTGGAGAACACTAGTCCTCACTTCATTTACTGCATGAGGCCAAATAGTAAGCAGATTCCAGGCTCCTTTGAGGAGAACCTTATCTCACAACAGCTAAACGCTTGTGGAATTTTGGAGATTGCTAGGGTTTCAAGATCTGGATATCCTGCCAGATTGACACATGAAGAATTTGCACAAAGGTATGGGTTCTTGCTTGTGGAAAAGAGCAATGTATGTCAGGATCCACTGAGTATATCGGTTGCTGTTCTTCAACAATTTAACATCCACCCTGAAATGTATCATGTTGGTTATACAAAATTGTTTCTCCGAGCTGGAAAGATTGATACATTGGAAGAAAAGAGAGCTCAAGTCTTGCATGGTATTCAAGTTGTTCAAAAATCCTTACGCGGTTGGCTAGTTCGAAAGCGTTTTAATGGCAGGAATAATTATAAAACAAAACCCAGCAGGAAGATTCCACAAGTGAAGGAGGAGGTTATCACACCGAATCAAGTTGCAGTTCTTCTGTCTACTACAACAGAGCTTGAAATGCGCGCTCTTAAGGCAGAAGAATCTCTCGGGAAAAAGGAACGGGAAAATGCCGCTCTTCAAGAGAAACTGCAACAATCCGAGGCCAGATGGATAGAATATGAAGCGAAGATGAAAGCAATGGAGAACATATGGCAAAAACAGATGACTTCCTTGCAAATGAGTCTTGCTGCAGCAAAAAAGAGCCTTGCAGCCGAAAACACAGCGGAAGATTCGGAGGACACAACCTCTATGGGATCGAGAACTCCAGGTGGTAGCACACCAATAATTGCAACAAGGAGAGATCCTAATGGCATGGGAGGAGGAGCAATAGGAAATCTGATGAAAGAATTCGAGCAGAGGAAACAAACTTTTGATGAAGATGCTAGAATTATAGTAGAAGCCAAGCTAGGTGGCCAATCGGGTCCGAATATGAGTTCTGAGGAAGAGTTCCGGAAACTTAAAATCCGGTTCCAGTTGTGGAAGAAAGAGTACAAGGTTAGGTTAAGGGAGACTAAAGCGAAGCTGCATAAACATGGCCACCATTTGGATGCTGAAAAGGGCCGGAGAAAATGGTGGGGTAAATTAAGCACAAAAACACTGCACCATTGA | 3267 | 41.57 | MMLSTSPSTLARSSLEEMLESLRRRDEIEKPKDLPPALPARPTLKGRLPLARRSLPNNFRVSDIGPLEGLSGGFNVNGEIKREEKDLGNKGSSIWSKKVKRDQNDKSPYSIPALASDSDWDDYIGYFIKKKLRVWCRLQNGPWESGTIQSTVEEEAFVSLFNGNVVKVSKGELFPANLDILNGVDDLTWLSHLNEPSALCNLRQRYSQDKIYSKVGPVLIAVNPFREVKLYGSELVTGYRQKLIDSPHVYAVADDAYNQMMKADVDQSILISGESGAGKTETAKVVIQYLAALGGADSGIDNRILHANCILEAFGSAKTSRNDDSSRFGKLIEIHFSTMGKICGAKIQTLMLERSRVVELSSDERSFHIFYQLCAGAPPNLRETLNLKTASEYKYLNQSECMAIDGVDDAKKFHVLMEALDIIQIHKEDQNYVFTLLAAVLWIGNVSFKVIDSDNHVEVLADEALKNATQLMGCSSRDLISILSTQSLKKLTLNQATFKRNALARFIYASLFDWLVEQINNSLGVRKCQSGNSIHLLDICGFGSFKKNKFEQFCINYANERLQQHFSQHLLKLPQEDYEFDGVDWNRVDFEDNQECLNLIEKKPLGLLALLDEESKSDDATDLTFTNKLKHHLSAHPSFKEEKSRAFGIHHYAGEVLYDTNGFLEENRDQLQSDSISLLSSCSAKLLQSFASKTNSSSQKQSVSMHLKEQLFKLMHHLENTSPHFIYCMRPNSKQIPGSFEENLISQQLNACGILEIARVSRSGYPARLTHEEFAQRYGFLLVEKSNVCQDPLSISVAVLQQFNIHPEMYHVGYTKLFLRAGKIDTLEEKRAQVLHGIQVVQKSLRGWLVRKRFNGRNNYKTKPSRKIPQVKEEVITPNQVAVLLSTTTELEMRALKAEESLGKKERENAALQEKLQQSEARWIEYEAKMKAMENIWQKQMTSLQMSLAAAKKSLAAENTAEDSEDTTSMGSRTPGGSTPIIATRRDPNGMGGGAIGNLMKEFEQRKQTFDEDARIIVEAKLGGQSGPNMSSEEEFRKLKIRFQLWKKEYKVRLRETKAKLHKHGHHLDAEKGRRKWWGKLSTKTLHH | 1088 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 9008926 | 9015270 | + | Conep15aG0112400.1 | Cone15ag1098 | 454226 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag1098 | 1088 | FunFam | Myosin heavy chain | 365 | 421 | - | - | |
| Cone15ag1098 | 1088 | Gene3D | Kinesin motor domain | 181 | 764 | IPR036961 | - | |
| Cone15ag1098 | 1088 | PRINTS | Myosin heavy chain signature | 266 | 291 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone15ag1098 | 1088 | PRINTS | Myosin heavy chain signature | 533 | 561 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone15ag1098 | 1088 | PRINTS | Myosin heavy chain signature | 586 | 614 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone15ag1098 | 1088 | PRINTS | Myosin heavy chain signature | 309 | 336 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone15ag1098 | 1088 | PRINTS | Myosin heavy chain signature | 212 | 231 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone15ag1098 | 1088 | PANTHER | MYOSIN | 133 | 855 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cone15ag1098 | 1088 | Pfam | Myosin head (motor domain) | 184 | 820 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone15ag1098 | 1088 | MobiDBLite | consensus disorder prediction | 956 | 989 | - | - | |
| Cone15ag1098 | 1088 | Gene3D | - | 365 | 421 | - | - | |
| Cone15ag1098 | 1088 | MobiDBLite | consensus disorder prediction | 961 | 979 | - | - | |
| Cone15ag1098 | 1088 | Coils | Coil | 895 | 929 | - | - | |
| Cone15ag1098 | 1088 | Gene3D | - | 545 | 721 | - | - | |
| Cone15ag1098 | 1088 | CDD | MYSc_Myo8 | 196 | 820 | IPR036022 | - | |
| Cone15ag1098 | 1088 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 129 | 178 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone15ag1098 | 1088 | ProSiteProfiles | Myosin motor domain profile. | 182 | 832 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone15ag1098 | 1088 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 143 | 855 | IPR027417 | - | |
| Cone15ag1098 | 1088 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 422 | 522 | - | - | |
| Cone15ag1098 | 1088 | ProSiteProfiles | IQ motif profile. | 836 | 863 | - | - | |
| Cone15ag1098 | 1088 | MobiDBLite | consensus disorder prediction | 21 | 43 | - | - | |
| Cone15ag1098 | 1088 | Gene3D | - | 765 | 868 | - | - | |
| Cone15ag1098 | 1088 | SMART | MYSc_2a | 176 | 833 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone15ag1098 | Cone-Chr15:9008926 | Cone5ag1023 | Cone-Chr5:4441363 | 0 | dispersed | |
| Cone14ag1087 | Cone-Chr14:9103051 | Cone15ag1098 | Cone-Chr15:9008926 | 0 | wgd | |
| Cone15ag1098 | Cone-Chr15:9008926 | Cone6ag0113 | Cone-Chr6:541407 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag1098 | K10357 | - | mdm:103430057 | 1241.48 |