Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1101 ATGGCCACTCAACAAGAGATTTCTTATCGTTCACATGTAAATTACACCATAGATGATCGTCATACAAACTTTGATCACCGTAGTGATAGTGATGAAACACTAGAAGATGAAGGAGTAGAAGGAGAAGAAGAAGGAGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGATCCTCGTATCGTGTCGGGACGGAAGGGGTGGACACTGGGCCAAGTATTGGATCCGAGATTGAAATGGGTTCAAGAATGGACCCGGGTATTTCTCCTCGTATGTGTAATCGGGTTATTCGTGGACCCACTTTTCTTCTATGTCTTATCGATAAGTGAGGCGTCAATGTGTCTCTTCATAGACGGGTGGTTCGCCATATCGGTGACGGTTCTCCGGTGCATGACGGACGTATTTCACATGTGGAATATGTGGTTACAATTCAAGATGGCAAAGAGGTCGTTTACTTTAGGGTTTATGGAAGGAAGTGGTGGATTGAAGGATACAAGCTCTCGTAATGTAGCTCTCAAGTACTTTAAGGCTAAGACGGGCTTCTTCTTCGATCTCTTCGTTATTTTGCCCTTGCCTCAGATAGTAATATGGGTGGTGATTCCTTCATTGCTGGAAAAAGGATGTGTAACAGTGGCAATGACAGTGTTTCTGATAATGTTTTTGTTTCAATATCTGCCCAAACTGTATCACTCTGTCTGTCTCTTGCGGCGCATGCAAAACCTCTCGGGGTACATCTTCGGCACTGTTTGGTGGGGTATTGCTCTTAATATGATTGCCTACTTTGTTGCTGCTCATGCTGCCGGAGCGTGTTGGTATTTATTGGGGATCCAAAGAGCAGCAAAATGCCTAAGAACACAATGCCAAGCGACGGAGGGATGCGGTCTAAGAGTATTATCTTGTAAGGAAACCATATATTATGGGACAAGCAGTTTAGGGTTGAGGGATAGAGCAAGATCGGCTTGGGCTGTGACCAAACCAGCAAGGTCTATTTGCATAGATAGCTCAGATTTATATGACTATGGTGCTTATAAGTGGACCGTGCAACTTGTTACTAACGATAGCCGTCTCGAGAAGATACTCTTCCCCATCTTTTGGGGCCTAATGACTCTCAGCACATTTGGAAACTTAGAGAGCACAACGGAGTGGCTAGAAGTAGTATTCAACATCATTGTTTTGACTAGTGGGCTTCTTCTAGTGACCATGTTGATTGGGAATATCAAGGTGTTTTTACATGCAACGACATCAAAGAAACAAGCAATGCAGATGAAGATGAGGAATATAGAATGGTGGATGAGGAAGAGGCGACTGCCTCATGGGTTTAGACAACGCGTACGCGACTACGAGCGACAGAGATGGGCTGCCATGCGTGGTGTTGATGAATGCGACATGATTCGGAACCTTCCGGAGGGCCTTAGGAGGGACATTAAGTACCATCTCTGTTTGGACTTGGTCAGACAGGTTCCGTTGTTCCAACACATGGATGATCTAGTGCTAGAGAACATTTGCGACCGAGTCAAATCCCTCATCTTCACAAAAGGCGAAACAATAACTAGAGAAGGGGACCCAGTTCAAAGAATGCTCTTCGTTGTTCGAGGCCACCTTCAAAGTAGCCAACTCCTCCGTGACGGCCTTAAAAGTTGTTGCATGTTGGGGCCCGGAAACTTCAGTGGTGATGAGCTTCTATCATGGTGTTTAAGACGCCCGTTTATTGAAAGACTCCCACCATCTTCATCAACCTTAGTCACTCTCGAAACAACTGAGGCTTTTGGACTTGAAGCAGAGGATGTCAAGTATGTTACACAACATTTCAGGTACACATTTGTGAACAAAAAAGTGAAGAGAAGTGCTAGATATTATTCGCCCGGGTGGAGAACATGGGCTGCGGTCGCAATTCAGCTTGCTTGGAGGAGATACAAGCACCGTTTGACACTCACTTCCTTGAGTTTCATTAGGCCAAGAAGGCCTTTGTCTAGATGCTCTTCAATGGGGGAAGATAGGCTAAGGCTCTACACGGCTTTGTTGACTTCTCCAAAGCCTAATCAAGATGACTTTGATTTTTGA 2058 44.95 MATQQEISYRSHVNYTIDDRHTNFDHRSDSDETLEDEGVEGEEEGEEEEEEEEEEEDPRIVSGRKGWTLGQVLDPRLKWVQEWTRVFLLVCVIGLFVDPLFFYVLSISEASMCLFIDGWFAISVTVLRCMTDVFHMWNMWLQFKMAKRSFTLGFMEGSGGLKDTSSRNVALKYFKAKTGFFFDLFVILPLPQIVIWVVIPSLLEKGCVTVAMTVFLIMFLFQYLPKLYHSVCLLRRMQNLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGIQRAAKCLRTQCQATEGCGLRVLSCKETIYYGTSSLGLRDRARSAWAVTKPARSICIDSSDLYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQMKMRNIEWWMRKRRLPHGFRQRVRDYERQRWAAMRGVDECDMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQLLRDGLKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNKKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRCSSMGEDRLRLYTALLTSPKPNQDDFDF 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9035099 9039506 + Conep15aG0112700.1 Cone15ag1101 454229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1101 685 FunFam cyclic nucleotide-gated ion channel 4 486 604 - -
Cone15ag1101 685 SUPERFAMILY cAMP-binding domain-like 414 602 IPR018490 -
Cone15ag1101 685 MobiDBLite consensus disorder prediction 34 57 - -
Cone15ag1101 685 Pfam Cyclic nucleotide-binding domain 509 598 IPR000595 -
Cone15ag1101 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 56 642 - -
Cone15ag1101 685 FunFam Cyclic nucleotide-gated ion channel 1 415 479 - -
Cone15ag1101 685 SUPERFAMILY Voltage-gated potassium channels 79 409 - -
Cone15ag1101 685 Gene3D Jelly Rolls 486 604 IPR014710 -
Cone15ag1101 685 Gene3D Helix hairpin bin 413 479 - -
Cone15ag1101 685 ProSiteProfiles cAMP/cGMP binding motif profile. 488 598 IPR000595 -
Cone15ag1101 685 CDD CAP_ED 488 594 IPR000595 -
Cone15ag1101 685 MobiDBLite consensus disorder prediction 20 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1101 Cone-Chr15:9035099 Cone16ag0485 Cone-Chr16:6972025 1.27E-209 dispersed
Cone14ag1089 Cone-Chr14:9139951 Cone15ag1101 Cone-Chr15:9035099 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1101 K05391 - mdm:103430048 1102.43