Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1114 ATGGGCACTTTCCCTTTCAAGCTTATCCTCTCTCATGTAATCCTTCTTTTCATCAAAATATCAACTGCAATTGATTTCATAACTCAATCTCAATCTCTAACTGATGGCAATGCCTTACTTTCCCAAGGCAAAACCTTTGAATTGGGTTTCTTCAGTCCTGCTACTTCGAAAAACCGTTACTTAGGAATCTGGTCCAAGAATAGTCCGGTCCAAACTGTCATCTGGGTCGCAAACTGGAACAACCCGATCCAAGATTCCTCCGGCAACTTGGTAATAAACAAAACAGGTACCATCCTACTTCTCAGTCAAAACAATACTCTGGTTTGGTCAGCCGGGTTGCTAAACCAAGTCCAGAATCCGATTTTACAGCTCTTAGATTCCGGAAATCTTGTCCTGAGAGAAGAATCAGATGCAAACCCGGATAAGTATTCCTGGCAAAGCTTCGACTACTCTACGGATTCGTTATCAGTTTCAAATCATTACTATGTTCCTAACAAGTCTTTGACAGTTATTATGGCTTTGAATAATCAACCCAATTCAAACTATTGTGATACTCATGCGCTATGTGGCCCGTATGGATATTGTAACATAAGCACTTCACCGGTCTGTAAATGTTTAGATGGATTCAAGCCAAGAGCGCCAGATAGATGGAACAAGTTTGATAAAACAGATGGGTGTGAAAGGGAGGAGCCATTGAATTGTGGAGGTGGAAATAATAGTAATAATAGTATCAGGTTTGAGAAATATACGGACTTGCAAGCGCCGGATGGGAACCGTACTTGGGTGGATAGAAGCTTGAGTCTTGAAGAATGTAGGACTAAGTGTTTGAATGATTGTTCTTGCTCTGCTTATGGAAATGTAGAGCATGTAAGAGGAGCTTGGAGTGGTTGTGCTCTCTGGTTTGGTGATTTGATTAATCTCAAGGCTCTTCCAGAAGGTGGGCAGGATATATATGTTCGAATGCTGGCTTCGGAAATAGTCGTAACTAAAAATTCTGAATCAAATCGGAAGAGGACAATTGGAGCGGTAACTGGGTGTTTGATTGCTTTGATTCTTGCAATCCTATTATTCAGCTTCTTCATATGCAGGAAGAGGTCTAACTTCAGAGGCCAAGATAAGGAAAAGGAAGACTTTGAGCTTCCATCATTCGACTTATCTACGATAAGTAAGGCAACTGATAACTTTTCGACCAACAATAAGCTTGGGCAAGGTGGCTTTGGACCTGTATACAAGGGGAGGCTAACAAATGGGCAGGAAATTGCAGTGAAAAAGCTTTCGGAGAATTCGGGACAAGGCATGAATGAATTGAAAAATGAAGTGATACTGTTTTCGAAACTTCAACATCGAAATCTCGTAAGGCTTCTCGGTTGTTGTCTCCAGGGAAAAGAGAAAATGCTCATCTATGAATACTTGCCTAACAAAAGCTTGGATTTTTTTATATTTGACGAAACAAAAGGAAAGCTATTAGGTTGGTCCATCCGGTTCCATATTATTTGTGGAATTGCTCGTGGGCTTCTTTATCTTCATCGAGATTCGAGATTGAGGATAATACATAGAGATCTCAAAGCAAGCAATATTTTACTTGATGGTGATATGAACCCCAAAATCTCTGATTTCGGCCTTGCTAGAACTTTTGGTGGAGACCAGACAGAAGCAAAGACAAGAAGAGTGGTTGGAACATACGGATATATGGCACCGGAATATGCTATTGACGGACAATTTTCAGTAAAATCTGATGTCTTTAGTTTCGGAATTCTATTATTGGAGATCATAAGCGGAAAGAGAAATCAGGGATACTATCGTCCAAACCCTAATGACCTTAACCTTATTGGATACGCATGGACATTGTGGAATGAAGACAGACCAACAGAGCTAATCGATGAAATCCTTGATGAGTCATGGACATTTTCGGAAGTCTTACAGTGCATCCACGTTGGTCTCTTATGTGTTCAACACAATCCAGAAGACCGGCCCACCATGTCATCCGTGGTCATGATGTTAGGTAGTGACAATATTTCCTTGCCTCAGCCTAAACAACCAGGTTTCTTCATGGAGGAGGCCGAATTTGCTAATATTGAATTCCAATCTAGGGATCAATTGATTTCAACTAATGAGTTATCCGTTACAGTTCTTGAGCCTAGATAG 2145 40.75 MGTFPFKLILSHVILLFIKISTAIDFITQSQSLTDGNALLSQGKTFELGFFSPATSKNRYLGIWSKNSPVQTVIWVANWNNPIQDSSGNLVINKTGTILLLSQNNTLVWSAGLLNQVQNPILQLLDSGNLVLREESDANPDKYSWQSFDYSTDSLSVSNHYYVPNKSLTVIMALNNQPNSNYCDTHALCGPYGYCNISTSPVCKCLDGFKPRAPDRWNKFDKTDGCEREEPLNCGGGNNSNNSIRFEKYTDLQAPDGNRTWVDRSLSLEECRTKCLNDCSCSAYGNVEHVRGAWSGCALWFGDLINLKALPEGGQDIYVRMLASEIVVTKNSESNRKRTIGAVTGCLIALILAILLFSFFICRKRSNFRGQDKEKEDFELPSFDLSTISKATDNFSTNNKLGQGGFGPVYKGRLTNGQEIAVKKLSENSGQGMNELKNEVILFSKLQHRNLVRLLGCCLQGKEKMLIYEYLPNKSLDFFIFDETKGKLLGWSIRFHIICGIARGLLYLHRDSRLRIIHRDLKASNILLDGDMNPKISDFGLARTFGGDQTEAKTRRVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIISGKRNQGYYRPNPNDLNLIGYAWTLWNEDRPTELIDEILDESWTFSEVLQCIHVGLLCVQHNPEDRPTMSSVVMMLGSDNISLPQPKQPGFFMEEAEFANIEFQSRDQLISTNELSVTVLEPR 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9112166 9115344 - Conep15aG0114000.1 Cone15ag1114 454242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1114 714 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 160 682 - -
Cone15ag1114 714 Pfam S-locus glycoprotein domain 179 212 IPR000858 GO:0048544(InterPro)
Cone15ag1114 714 Gene3D - 19 148 IPR036426 -
Cone15ag1114 714 Pfam D-mannose binding lectin 72 156 IPR001480 -
Cone15ag1114 714 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Cone15ag1114 714 Pfam Protein tyrosine and serine/threonine kinase 397 666 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1114 714 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 153 IPR036426 -
Cone15ag1114 714 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 361 470 - -
Cone15ag1114 714 Pfam PAN-like domain 245 306 IPR003609 -
Cone15ag1114 714 SUPERFAMILY Protein kinase-like (PK-like) 378 694 IPR011009 -
Cone15ag1114 714 SMART blect_4 30 151 IPR001480 -
Cone15ag1114 714 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Cone15ag1114 714 Gene3D Transferase(Phosphotransferase) domain 1 471 676 - -
Cone15ag1114 714 SMART ntp_6 241 321 IPR003609 -
Cone15ag1114 714 SMART serkin_6 395 667 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1114 714 CDD PAN_AP_plant 245 320 - -
Cone15ag1114 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1114 714 CDD STKc_IRAK 401 667 - -
Cone15ag1114 714 Gene3D Phosphorylase Kinase; domain 1 369 470 - -
Cone15ag1114 714 ProSiteProfiles PAN/Apple domain profile. 234 322 IPR003609 -
Cone15ag1114 714 CDD B_lectin 30 150 IPR001480 -
Cone15ag1114 714 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 675 - -
Cone15ag1114 714 Pfam Domain of unknown function (DUF3403) 669 714 IPR021820 GO:0004674(InterPro)
Cone15ag1114 714 PIRSF SRK 2 160 IPR024171 GO:0004674(InterPro)
Cone15ag1114 714 PIRSF SRK 156 714 IPR024171 GO:0004674(InterPro)
Cone15ag1114 714 ProSiteProfiles Protein kinase domain profile. 395 674 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1114 Cone-Chr15:9112166 Cone15ag1122 Cone-Chr15:9148354 0 dispersed
Cone15ag1114 Cone-Chr15:9112166 Cone15ag1116 Cone-Chr15:9119105 7.88E-267 proximal
Cone10ag1305 Cone-Chr10:10183519 Cone15ag1114 Cone-Chr15:9112166 2.03E-132 wgd
Cone12ag1413 Cone-Chr12:10327058 Cone15ag1114 Cone-Chr15:9112166 1.31E-139 wgd
Cone14ag1104 Cone-Chr14:9211550 Cone15ag1114 Cone-Chr15:9112166 0 wgd
Cone15ag1114 Cone-Chr15:9112166 Cone6ag1065 Cone-Chr6:6254890 3.62E-217 wgd
Cone15ag1114 Cone-Chr15:9112166 Cone6ag0103 Cone-Chr6:501150 1.11E-266 wgd
Cone15ag1114 Cone-Chr15:9112166 Cone9ag1036 Cone-Chr9:5546112 6.85E-172 wgd
Cone15ag1114 Cone-Chr15:9112166 Cone9ag0121 Cone-Chr9:528827 2.57E-181 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82162 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1114 - - - 0.0