Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1118 ATGTCACGTGCTAGGAACACGTCTCTTAAACTTGAGGAGTGTAGGATTAAGTGTCTGAGTAATTGTTCGTGTTCTGCTTATGGAAATACGGATATTAGAGGGAGCGGAAGTGGTTGTGTTAATTGGTTTTGTGATATAATTGATCTTAAGGTTATTCCAAGTGGTGGGCAGGATATATATCTTCGGATGCCGGCTTCAGAATTAAGGTCAGCTTCTGAGAGGGAGAAGAAGATTGCAGTGGCAATTGGTTGTGCCTTTGCAGGAGTTTTGGCAATTCTCTTACTTGGGCTCTGCTTTTCTAGAAAAAAGTCAAACATCATAGTTAAAGAAGAAAAAGAAGACTTGGAGCTTCCATTGTTTGATTTGTCAACCATAACTAGTGTCACCGATAACTTTTCTGTCAACAAAAAGCTTGGGGAAGGTGGATTTGGACCGGTTTACAAGGTGAACTTTTTTTTAATGGTCAAATATGTTAGTAAACTAAGGCAGACTAGAAATGGGCAAGAAATTGCAGTGAAGAGGCTTTCACAAAATTCTGGTCAAGGAGTAAATGAGTTTAAGAATGAAGTGAGATTAATAGCGAAACTTCAACACCGGAATCTCGTAAAGCTTTTCGGTTGTTGCATTCAGGGGGAGGAGAAAATGCTTATCTATGAATACATGCCCAACAAAAGCTTGGATGCTTTCATATTTGATCAAGCACATGGAAAACAATTAAGTTGGTCTACACGGTTCCATATTATTTGTGGGGTCGCTCGAGGGCTTCTTTATCTCCATCAAGATTCTAGATTGAGGATAATACAGAGAGATCTCAAAGCGAGCAACGTCTTGCTCGATCTTGATATGAACCCAAAAATCTCGGATTTCGGAATTGCAAGATCTTTCGGAAGGGATGAAACACAAGCAAATACCAGAAGGGTTGTTGGAACTTATGGTTACATGGCACCGGAATATGCTATCGCCGGACAGTTCTCAATAAAATCAGATGTTTTCAGTTTCGGAATCTTATTGCTGGAGATGATAAGTGGAAAGAAAAATCGTGGATTTTATCGTCCAAATAACCACAATCTTAACCTTATAGGATATGTAAGCCGACCAGCTGAACTAATCAATGAACCCTTTGGCGACTCATTACCAATGTCGGATGTCTTACGGTGCATCCATATCGGTCTCTTATGTGTTCAACAAAATCCTGAAGACCGGCCCACCATGTCATCTGTGGTTATGATGTCTCAACCTAAACAACCTGGTTTCTTTATGGAGGAGGGTTGTGGCAAGAAAGATCTTCGATCAAGCAACGATCACTTGAATTTGACGAGCGAAATGACCATTACAGTACTCGAGGCTAGATGA 1353 40.43 MSRARNTSLKLEECRIKCLSNCSCSAYGNTDIRGSGSGCVNWFCDIIDLKVIPSGGQDIYLRMPASELRSASEREKKIAVAIGCAFAGVLAILLLGLCFSRKKSNIIVKEEKEDLELPLFDLSTITSVTDNFSVNKKLGEGGFGPVYKVNFFLMVKYVSKLRQTRNGQEIAVKRLSQNSGQGVNEFKNEVRLIAKLQHRNLVKLFGCCIQGEEKMLIYEYMPNKSLDAFIFDQAHGKQLSWSTRFHIICGVARGLLYLHQDSRLRIIQRDLKASNVLLDLDMNPKISDFGIARSFGRDETQANTRRVVGTYGYMAPEYAIAGQFSIKSDVFSFGILLLEMISGKKNRGFYRPNNHNLNLIGYVSRPAELINEPFGDSLPMSDVLRCIHIGLLCVQQNPEDRPTMSSVVMMSQPKQPGFFMEEGCGKKDLRSSNDHLNLTSEMTITVLEAR 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9129436 9131543 + Conep15aG0114400.1 Cone15ag1118 454246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1118 450 ProSiteProfiles PAN/Apple domain profile. 1 64 IPR003609 -
Cone15ag1118 450 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 98 220 - -
Cone15ag1118 450 Gene3D Phosphorylase Kinase; domain 1 94 220 - -
Cone15ag1118 450 ProSiteProfiles Protein kinase domain profile. 132 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1118 450 SMART serkin_6 132 419 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1118 450 CDD PAN_AP_plant 11 64 - -
Cone15ag1118 450 Pfam Protein tyrosine and serine/threonine kinase 134 408 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1118 450 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 419 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone15ag1118 450 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 221 416 - -
Cone15ag1118 450 SUPERFAMILY Protein kinase-like (PK-like) 112 409 IPR011009 -
Cone15ag1118 450 Gene3D Transferase(Phosphotransferase) domain 1 221 417 - -
Cone15ag1118 450 Pfam PAN-like domain 8 49 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1118 Cone-Chr15:9129436 Cone15ag1121 Cone-Chr15:9143339 4.41E-269 dispersed
Cone15ag1117 Cone-Chr15:9121978 Cone15ag1118 Cone-Chr15:9129436 1.34E-143 tandem
Cone15ag1118 Cone-Chr15:9129436 Cone15ag1119 Cone-Chr15:9133050 8.32E-267 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82165 PF07899 Frigida 1.90E-101 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1118 - - - 0.0