Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1120 ATGGGCAATTCCTCTTTGAAGCTTATCTTCCTATTAACCCACATACTCTTCTCTTTCTTCAAATTATCGACTTCAATTGATTCCATAACTCAATCTCAACCCCTCGTCGATGACAACACCACCTTAGTTTCCAAAAACGAGACTTTCGAATTGGGTTTCTTTAGTCCCGGAAATTCGACGAACCGATACATAGGAATATGGTACAAGTTCATTCCATTCCAAACCATAGTTTGGGTTGCAAATCGGAACAACCCAATCAATGATTCGTCCGGAGTTTTGGCACTGAACCAGACAGGGAATCTACTCCTCAATCAAAACAACACTGTTGTTTGGTCAGCTAGATTGTTAAAACAACTCCGGAATCCGGTCTTACAGCTCTTAGATACCGGAAACCTCATCCTAAGAGAAGAAAATTATGAAAATCCGGATAACTATTCTTGGCAAAGCTTTGACTATCCAACGGATACGTTATTACCCGGGATGATGCTTGGATGGGACTTGAAGAACAAAATCGATCGACGTGTTACGGCTTGGAAGAATCCAAACGACCCTTCTCCGGGAAATTTGTCTTGGACAATGGAACTTCATAACTACCCGGAGACAGTTACATGGATGGGTTCGAAAAAGTACGTTAGGCACGGTCCTTGGAACGGCATAACGGTTAGTAACATATCACCTGTTCCGCTATTTGTGAAAATCAAGTCTACAGTGAATGATGATGAGGTTTATTACGGTTATACCGTTCCGAATAAGTCGTTGACAGTTCTTATGGTATTGGATCAATCTAGTAATATGCGTTATATCAACATATGGTCACCCGAAAAACAAATTTGGAGGCATTACTTGACTCTCCCGACTGATCCTTGCGACATTTACGCCCTTTGTGGGCCGTATGGATATTGTGATAAGAGTAAGACACCTAATTGCGTATGCTTAAAAGGGTTCAGGGAAAAATCGCCGGAAAAATGGAAATCACTTCAACCGAACTATACGGATGGATGTGAGAGGGTGAAGACATTGAGTTGTGCGGAAAATGAAATTGGCTTTAGGATAATTTCAGGGATGAAAGCACCTGATACAACACATACTTGGGTAAATAGAAGTATGAATCTTGAGGAGTGTAGGATTAAGTGTTTGAGTAATTGTTTGTGTTCGGCTTACGGAAATACCGATATTAGCGTGAGCGGAAGTGGTTGTGTTAATTGGTTTGCTGATATAATTGATCTTAAGGGTCACCCGCTGACAAGGAGAAGAAGATTGCAGTGGCAATTGGTTGTGCCATTGCAGGCAGGAGTTTTGGCAATTCTCTTACTTGGGTTGAGCTTTTATAGAAAAAAGTCTAACATCATAGGTAAAGAAGATAAACAAGACTTGGAGCTCCCCTTGTTTGATTTGTCGACCATAGCTAGTGCCACTGATGACTTTTCGATCAACAATAAGCTTGGGGAAGGCGGCTTTGGACCTGTTTACATGGGCAGACTAGCAAATGGGCAAGAAATTGCAGTGAAGAGGCTTTCACAGAATTCTGGGCAAGGAGTAAATGAGTTTAAGAATGAAGTGATATTAATAGCGAAACTTCAACACCGGAATCTCGTAAAGCTTCTCGGTTGTTGCACTCAGGGAGAGGAGAAAATGCTTATCTATGAATACATGCCCAACAAAAGCTTGGATGCTTTCATATTTGATCAAGCACATGGAAAACAATTAAGTTGGTCTACACGGTTCCATATTATTTGTGGGGTCGCTCGAGGGCTTCTTTATCTCCATCAAGATTCTAGATTGAGGATAATACATAGAGATCTCAAGGCGAGCAACGTCTTGCTCGATCTTGATATGAACCCAAAAATCTCGGATTTCGGAATTGCAAGATCTTTCGGAGGGGATGAAACAGAAGCAAATACCAGAAGGGTTGTTGGAACTTGTGGTTACATGGCACCGGAATATGCTATCGCCGGACAGTTCTCAATAAAATCAGATGTTTTCAGTTTCGGAATCTTATTGCTGGAGATGATAAGTGGAAAGAAAAATCGTGGATTTTATCGTCCAAATAACCACGATCTTAACCTTATAGGATATGCATGGAGATTGTGGAATGAGGGCCAACCAGCCGAACTAATCAATGAAACCTTTGGCGACTCATTACCAATGTCGGAAGTCTTACGGTGCATCCATATCGGTCTCTTATGTGTTCAACAAAATCCTGAAGACCGGCCCACCATGTCATCTGTGGTTATGATGTCTCAACCTAAACAACCTGGTTTCTTTATGGAGGAGGGTTGTGGCAAGAAAGATCTTCGATCAAGCAACGATCACTTGAATTTGACGAGCGAAATGACCATTACAGTACTCGAGGCTAGATGA 2361 41.63 MGNSSLKLIFLLTHILFSFFKLSTSIDSITQSQPLVDDNTTLVSKNETFELGFFSPGNSTNRYIGIWYKFIPFQTIVWVANRNNPINDSSGVLALNQTGNLLLNQNNTVVWSARLLKQLRNPVLQLLDTGNLILREENYENPDNYSWQSFDYPTDTLLPGMMLGWDLKNKIDRRVTAWKNPNDPSPGNLSWTMELHNYPETVTWMGSKKYVRHGPWNGITVSNISPVPLFVKIKSTVNDDEVYYGYTVPNKSLTVLMVLDQSSNMRYINIWSPEKQIWRHYLTLPTDPCDIYALCGPYGYCDKSKTPNCVCLKGFREKSPEKWKSLQPNYTDGCERVKTLSCAENEIGFRIISGMKAPDTTHTWVNRSMNLEECRIKCLSNCLCSAYGNTDISVSGSGCVNWFADIIDLKGHPLTRRRRLQWQLVVPLQAGVLAILLLGLSFYRKKSNIIGKEDKQDLELPLFDLSTIASATDDFSINNKLGEGGFGPVYMGRLANGQEIAVKRLSQNSGQGVNEFKNEVILIAKLQHRNLVKLLGCCTQGEEKMLIYEYMPNKSLDAFIFDQAHGKQLSWSTRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDLDMNPKISDFGIARSFGGDETEANTRRVVGTCGYMAPEYAIAGQFSIKSDVFSFGILLLEMISGKKNRGFYRPNNHDLNLIGYAWRLWNEGQPAELINETFGDSLPMSEVLRCIHIGLLCVQQNPEDRPTMSSVVMMSQPKQPGFFMEEGCGKKDLRSSNDHLNLTSEMTITVLEAR 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9138663 9141832 + Conep15aG0114600.1 Cone15ag1120 454248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1120 786 ProSiteProfiles PAN/Apple domain profile. 342 419 IPR003609 -
Cone15ag1120 786 CDD PAN_AP_plant 339 410 - -
Cone15ag1120 786 CDD STKc_IRAK 481 746 - -
Cone15ag1120 786 CDD B_lectin 38 153 IPR001480 -
Cone15ag1120 786 Pfam PAN-like domain 342 409 IPR003609 -
Cone15ag1120 786 Gene3D Phosphorylase Kinase; domain 1 450 550 - -
Cone15ag1120 786 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Cone15ag1120 786 SUPERFAMILY Protein kinase-like (PK-like) 458 745 IPR011009 -
Cone15ag1120 786 SMART serkin_6 475 755 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1120 786 ProSiteProfiles Protein kinase domain profile. 475 754 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1120 786 Gene3D Transferase(Phosphotransferase) domain 1 551 753 - -
Cone15ag1120 786 PIRSF SRK 2 430 IPR024171 GO:0004674(InterPro)
Cone15ag1120 786 PIRSF SRK 432 786 IPR024171 GO:0004674(InterPro)
Cone15ag1120 786 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 753 - -
Cone15ag1120 786 Pfam D-mannose binding lectin 75 179 IPR001480 -
Cone15ag1120 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 150 - -
Cone15ag1120 786 SMART blect_4 33 153 IPR001480 -
Cone15ag1120 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 184 IPR036426 -
Cone15ag1120 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1120 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 441 550 - -
Cone15ag1120 786 Pfam Protein tyrosine and serine/threonine kinase 476 744 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1120 786 Pfam S-locus glycoprotein domain 212 318 IPR000858 GO:0048544(InterPro)
Cone15ag1120 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 551 752 - -
Cone15ag1120 786 Gene3D - 21 150 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1120 Cone-Chr15:9138663 Cone15ag1122 Cone-Chr15:9148354 0 dispersed
Cone15ag1119 Cone-Chr15:9133050 Cone15ag1120 Cone-Chr15:9138663 0 tandem
Cone15ag1120 Cone-Chr15:9138663 Cone15ag1121 Cone-Chr15:9143339 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82167 PF16135 TDBD 5.50E-22 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1120 - - - 0.0