Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1121 ATGGACGCTTCCTCTCGGAAGGTTATCATCATATCATCCCACATACTCTTTTCTTTTTTCAAATTGTCAACTTCAATTGATTCCATAACTCGATCAAAATCCCTCCTTGATGACAACACCACCTTAGTATCCAAAAACGGAACTTTTGAATTGGGTTTCTTTAGTCCTGGGAATTCAACGAACCGCTACTTAGGAATATGGTACAAGTTCATTCCAATCAAAACCATCATCTGGGTTGCAAACCGGAACAACCCAATCAACGATTCGTCTGGAATTTTGGTGATGAACCGAACAGGCAGTCTACACCTCATTCAAAAGAACTCTCTTGTTTGGTCAGCTAGATTGCTAAAACAACTCCGGAACCCGGTCTTACAGCTCTTAGATACTGGAAATCTCGTCCTAAGAGAAGATAACGATGAAAACCTGGAAAACTATTCTTGGCAAAGCTTCGACTATCCGACCGATACATTACTACCCGGGATGAAACTTGGATGGGACTTGAAGAACAAAATCGATCGACGTGTTACTGCCTGGAAGAATCCAAACGACCCTTCTCCGGGAAATTTGACTTGGAAAATGGAACTTCATAACTACCCCGAGACAGTTACATGGATGGGTTTGAAAGAGTACGTTAGGTTCGGTCCTTGGAATGGCATGTCAGTTAGTAGTATGGCACCTAATGTTGTGCTACTTGTGAAGATCAATTCTACAGTGAACGATGATGAGGTTTATTATGATTATACAGTCCCGAATAAGTCGTTGACTGTTAATATGGTATTGAATCAATCAAGAAATAGGCGTGATATCAACATATGGTCACCCGAAAAACAAATTTGGAGGCTATACCTGACTCTCCCGAGAGATCCTTGTGACAAATACGACCTTTGTGGGTCGTATGGATATTGTGATGCGAGTAAGACACCTTATTGCACATGTTTAGAAGGGTTTAAGGCGAAATCACCTGAGAAATGGAACTCACTTCAGCCAAATTTTACGGATGGGTGTGTAAGGGTTAAGCCGTTGAGTTGTGCAGATAATGACATCGGGTATAGGAGAATTTCTAAAATGAAAGCACCTGATACTACACGTACTTGGGTGAATAGGAGTATGAATCTTGAAGAGTGTAGGGGTAAGTGTCTTAGTAATTGTTCATGTTCGGTTTATGGAAATACGGATATTAGTGGGAGCGGAAGTGGTTGTGTTAATTGGTTTGGTGATATAATTGATCTGAAGGTTATTCCGAATGGTGGACAGGATATATATCTTCGGATGCCGGCCTCAGAATTAAGGTCACCCGCTGACAAGGAGAAGAAGATTGCAGTGGCAATTGGTTGTGCCATTGCAGGAGTTTTGGCAATTCTCTTACTTGGGTTGAGCTTTTATAGAAAAAAGTCTAACATCATAGGTAAAGAAGATAAACAAGACTTGGAGCTCCCCTTGTTTGATTTGTCGACCATAGCTAGTGCCACTGATGACTTTTCGATCAACAATAAGCTTGGGGAAGGCGGCTTTGGACCTGTTTACATGGGAAGACTAGCAAATGGGCAAGAAATTGCAGTGAAGAGGCTTTCACAGAATTCTGGGCAAGGAGTAAATGAGTTTAAGAATGAAGTGATATTAATAGCGAAACTTCAACACCGGAATCTCGTAAAGCTTCTCGGTTGTTGCATTCAGGGAGAGGAGAAAATGCTTATCTATGAATACATGCCCAACAAAAGCTTGGATTCTTTCATATTTGATCAAGCACATGGAAAACAATTAAGTTGGTCTACACGGTTCCATATTATTTGTGGGGTCGCTCGAGGGCTTCTTTATCTCCATCAAGATTCTAGATTGAGGATAATACATAGAGATCTCAAAGCGAGCAACGTCTTGCTCGACCTTGATATGAACCCAAAAATCTCGGATTTCGGAATTGCAAGATCTTTCAGAGGGGATGAAACACAAGCAAATACCAAAAGGGTGGTTGGAACTTATGGTTACATGGCACCGGAATATGCTATCGCCGGACAGTTCTCAATAAAATCAGATGTTTTCAGTTTCGGAATCTTATTGCTGGAGATGATAAGTGGAAAGAAAAATCGTGGATTTTATCGTCCAAATAACCACGATCTTAACCTTATAGGATATGCATGGAGATTGTGGAATGAGGGCCAACCAGCCGAACTAATCAATGAAACCTTTGGCGACTCATTACCAATGTCGGAAGTCTTACGGTGCATCCATATCGGTCTCTTATGTGTTCAACAAAATCCTGAAGACCGGCCCACCATGTCATCTGTGGTTATGATGTTAAGCAATGAGAATAGTGTTTTGTCTCAACCTAAACAACCCGGTTTCTTCATGGAGGAGGGTTGTGGCAAGAAAGATCTTCAATCAAGCAACGATCGCTTGAATTCGACGAACGAAATGACCATTACAGTACTCGAGGCTAGATGA 2439 41.41 MDASSRKVIIISSHILFSFFKLSTSIDSITRSKSLLDDNTTLVSKNGTFELGFFSPGNSTNRYLGIWYKFIPIKTIIWVANRNNPINDSSGILVMNRTGSLHLIQKNSLVWSARLLKQLRNPVLQLLDTGNLVLREDNDENLENYSWQSFDYPTDTLLPGMKLGWDLKNKIDRRVTAWKNPNDPSPGNLTWKMELHNYPETVTWMGLKEYVRFGPWNGMSVSSMAPNVVLLVKINSTVNDDEVYYDYTVPNKSLTVNMVLNQSRNRRDINIWSPEKQIWRLYLTLPRDPCDKYDLCGSYGYCDASKTPYCTCLEGFKAKSPEKWNSLQPNFTDGCVRVKPLSCADNDIGYRRISKMKAPDTTRTWVNRSMNLEECRGKCLSNCSCSVYGNTDISGSGSGCVNWFGDIIDLKVIPNGGQDIYLRMPASELRSPADKEKKIAVAIGCAIAGVLAILLLGLSFYRKKSNIIGKEDKQDLELPLFDLSTIASATDDFSINNKLGEGGFGPVYMGRLANGQEIAVKRLSQNSGQGVNEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDSFIFDQAHGKQLSWSTRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDLDMNPKISDFGIARSFRGDETQANTKRVVGTYGYMAPEYAIAGQFSIKSDVFSFGILLLEMISGKKNRGFYRPNNHDLNLIGYAWRLWNEGQPAELINETFGDSLPMSEVLRCIHIGLLCVQQNPEDRPTMSSVVMMLSNENSVLSQPKQPGFFMEEGCGKKDLQSSNDRLNSTNEMTITVLEAR 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9143339 9146526 + Conep15aG0114700.1 Cone15ag1121 454249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1121 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1121 812 Pfam PAN-like domain 343 410 IPR003609 -
Cone15ag1121 812 SMART serkin_6 493 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1121 812 SUPERFAMILY Protein kinase-like (PK-like) 476 778 IPR011009 -
Cone15ag1121 812 SMART ntp_6 345 424 IPR003609 -
Cone15ag1121 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 150 - -
Cone15ag1121 812 PIRSF SRK 2 812 IPR024171 GO:0004674(InterPro)
Cone15ag1121 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 184 IPR036426 -
Cone15ag1121 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 26 780 - -
Cone15ag1121 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 773 - -
Cone15ag1121 812 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Cone15ag1121 812 SMART blect_4 33 153 IPR001480 -
Cone15ag1121 812 CDD B_lectin 35 153 IPR001480 -
Cone15ag1121 812 CDD STKc_IRAK 499 765 - -
Cone15ag1121 812 Pfam D-mannose binding lectin 75 179 IPR001480 -
Cone15ag1121 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 459 568 - -
Cone15ag1121 812 Gene3D Transferase(Phosphotransferase) domain 1 569 778 - -
Cone15ag1121 812 ProSiteProfiles Protein kinase domain profile. 493 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1121 812 Pfam Domain of unknown function (DUF3403) 767 812 IPR021820 GO:0004674(InterPro)
Cone15ag1121 812 Gene3D - 22 150 IPR036426 -
Cone15ag1121 812 CDD PAN_AP_plant 340 425 - -
Cone15ag1121 812 Pfam Protein tyrosine and serine/threonine kinase 494 764 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1121 812 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Cone15ag1121 812 Gene3D Phosphorylase Kinase; domain 1 468 568 - -
Cone15ag1121 812 Pfam S-locus glycoprotein domain 212 319 IPR000858 GO:0048544(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1118 Cone-Chr15:9129436 Cone15ag1121 Cone-Chr15:9143339 4.41E-269 dispersed
Cone15ag1119 Cone-Chr15:9133050 Cone15ag1121 Cone-Chr15:9143339 0 dispersed
Cone15ag1121 Cone-Chr15:9143339 Cone6ag0103 Cone-Chr6:501150 0 dispersed
Cone15ag1120 Cone-Chr15:9138663 Cone15ag1121 Cone-Chr15:9143339 0 tandem
Cone15ag1121 Cone-Chr15:9143339 Cone15ag1122 Cone-Chr15:9148354 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82168 PF06200 tify 3.20E-14 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1121 - - - 0.0