Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1122 ATGGCCACTTCCTCTTCGAAACTCATTATCCTCCTATTATCCCAAATTCTCTTTTCTCTCTTCAAAATCGCAACCTCAATTGATTCCATAACTCAATCTCAGTCCATCCTTGATAACAATACCACCTTAGTATCAAAAAACGGAACTTTCGAATTGGGTTTCTTTAGTCCCGGCAATTCGACGAACCGTTACATAGGAATATGGTACAAGTTCATTCCAATCCAAACCGTCTTTTGGGTTGCAAATCGGAACAACCCAATCAACGATTCGTCCGGAGCTTTGGCACTGAACCAAACAGGGAATCTACTCCTCAATCAAAACAATACTCTTGTTTGGTCAGCTAGATTGTTAAAACAACTCCGGAATCCGGTCTTACAGCTCTTAGATACCGGAAACCTCGTCCTAAGAGAAGAGAACGATGAAAATCCGGATAACTATTCATGGCAAAGCTTCGACTATCCAACCGATACGTTAATACCCGGGATGAAGCTTGGATGGGACTTGAAGAACAAAATCGATCGGCGTGTTACGGCTTGGAAGAATCCAAACGACCCTTCTGCGGGAAATTTGTCTTGGACAATGGAACTTCATAACTACCCTGAGACAGTCACATGGATGGGTTCGAAAGAGTACGTTAGGCACGGTCCTTGGAACGGCATAACGGTTAGCAGTAAACCACCTAATGCTTTGCCGCTTGTGAAGTTCAATTCTACAGTGAACGATAATGAGGTTTATTACGATTATACCGTTCCAAATAAGTCATTAACTGTTCTTATGGTAATGAATCAATCTAGCAATATGCGTGACATCAACATATGGTCACCCGAAAAGCAAATTTGGAGGCTATACGCGACGCTCCCGAGAGATCAATGTGACAATTACGCCCTTTGTGGGCCGTATGGATATTGTGATGTGAGTAAGACACCTAATTGCGTATGTTTACAAGGGTTCAAGGCCAAATCGCCCGAGAAATGGAACTCACTTCAGCCCAATTTTACGGATGGGTGTGAAAGGGCGAAGCCGTTGAGTTGTGCGGTTAATGACATTGGGTTTAGAAGAATTTCGGAAATGAAAGCACCGGATACTACACGTACTTGGGTGAATAAGAGTATGAATCTTGAGGAGTGTAGGATTAAGTGTCTGAGTAATTGTTCGTGTTCTGCTTATGGAAATACGGATATTAGTGGGAGCGGAAGTGGCTGTGTTAATTGGTTGGGTGATATAATTGATCTTAAGGTTATTCCGACTGGTGGGCAGGATATATATCTTCGGATGCCGGCTTCGGAATTAAGGTCACACTCTAGTAAGGGGAAGAAGATTGGAGTGGCAATTGGTTGTGCCATTGCTGGAGTTTTGGCAATTCTCTTACTTGGGTTCTGCTTTTGTAGAAAAAAGTCTAACATCATAGGTAAAGAAGATAAAGGAGACTTGGAGCTTCCATTGTTTGATTTGTCCACCATAACTAGTGCCACGGATAACTTTTCGATCAACAATAAGCTAGGGGAAGGTGGCTTTGGACCTGTTTACAAGGGTAGACTAGCAAATGGGCAAGAAATTGCAGTGAAGAGGCTTTCAAAGAATTCTGGGCAGGGACTAAATGAGTTTAAGAATGAAGTTATATTAATAGCTAAACTTCAACACCGGAATCTCGTAAAGCTTCTCGGTTGTTGCATTCAGGAGGATGAGAAAATGCTCGTCTATGAATACATGCCCAACAAAAGCTTGGATGCTTTCATATTTGATCAAGCACATGGAAAACAATTAAGTTGGTCTACATGGTTCCGGATTATTTGTGGGGTCGCTCGGGGGCTTCTTTATCTTCATCAAGATTCAAGATTGAGGATAATACATAGAGATCTCAAAGCGAGCAATGTCCTGCTCGACCTTGATATGAACCCAAAAATCTCGGATTTCGGAATTGCAAGAACTTTCGGAGCGGATGAAACAGAAGCAAATACCAAAAGGGTGGTTGGAACTTATGGTTACATGGCACCGGAATATGCTATAGATGGACAATTTTCAGTCAAATCGGATGTCTTTAGTTTCGGAATCTTAATGTTGGAGATGATAAGTGGAAAGAGAAACCGAGGATTTTATCGTCCGAATAACAATGACCTTAACCTTATAGGATACGCATGGCGATTGTGGAAAGAGGGCCGACCGGCCGAACTAATCGATGAAACCTTTGGCGACTCATTGACAATGTCGGAAGTTTTACGGTGCATCCATATTGGTCTCTTATGTGTTCAACAGCAACCTGAAGACCGGCCCACCATGTCAGCAGTGGTTATGATGTTAAGCAATGAGAATACTGTCCTGTCTCAACCTAAACAACCGGGTTTCTTCATGGAGGAGGATTTTGGCGAGAAACATTTTCGATCGACCAACGATCACTTGAATACGACGAACGAAATGACCATTACAGTACTCGAGGCTAGATGA 2442 42.51 MATSSSKLIILLLSQILFSLFKIATSIDSITQSQSILDNNTTLVSKNGTFELGFFSPGNSTNRYIGIWYKFIPIQTVFWVANRNNPINDSSGALALNQTGNLLLNQNNTLVWSARLLKQLRNPVLQLLDTGNLVLREENDENPDNYSWQSFDYPTDTLIPGMKLGWDLKNKIDRRVTAWKNPNDPSAGNLSWTMELHNYPETVTWMGSKEYVRHGPWNGITVSSKPPNALPLVKFNSTVNDNEVYYDYTVPNKSLTVLMVMNQSSNMRDINIWSPEKQIWRLYATLPRDQCDNYALCGPYGYCDVSKTPNCVCLQGFKAKSPEKWNSLQPNFTDGCERAKPLSCAVNDIGFRRISEMKAPDTTRTWVNKSMNLEECRIKCLSNCSCSAYGNTDISGSGSGCVNWLGDIIDLKVIPTGGQDIYLRMPASELRSHSSKGKKIGVAIGCAIAGVLAILLLGFCFCRKKSNIIGKEDKGDLELPLFDLSTITSATDNFSINNKLGEGGFGPVYKGRLANGQEIAVKRLSKNSGQGLNEFKNEVILIAKLQHRNLVKLLGCCIQEDEKMLVYEYMPNKSLDAFIFDQAHGKQLSWSTWFRIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDLDMNPKISDFGIARTFGADETEANTKRVVGTYGYMAPEYAIDGQFSVKSDVFSFGILMLEMISGKRNRGFYRPNNNDLNLIGYAWRLWKEGRPAELIDETFGDSLTMSEVLRCIHIGLLCVQQQPEDRPTMSAVVMMLSNENTVLSQPKQPGFFMEEDFGEKHFRSTNDHLNTTNEMTITVLEAR 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9148354 9151744 + Conep15aG0114800.1 Cone15ag1122 454250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1122 813 SMART ntp_6 346 425 IPR003609 -
Cone15ag1122 813 SUPERFAMILY Protein kinase-like (PK-like) 477 782 IPR011009 -
Cone15ag1122 813 ProSiteProfiles Protein kinase domain profile. 494 773 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1122 813 CDD B_lectin 36 154 IPR001480 -
Cone15ag1122 813 SMART serkin_6 494 773 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1122 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 23 781 - -
Cone15ag1122 813 SMART blect_4 34 154 IPR001480 -
Cone15ag1122 813 PIRSF SRK 1 813 IPR024171 GO:0004674(InterPro)
Cone15ag1122 813 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Cone15ag1122 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 151 - -
Cone15ag1122 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1122 813 Pfam D-mannose binding lectin 76 180 IPR001480 -
Cone15ag1122 813 Gene3D - 22 151 IPR036426 -
Cone15ag1122 813 ProSiteProfiles PAN/Apple domain profile. 344 426 IPR003609 -
Cone15ag1122 813 Gene3D Phosphorylase Kinase; domain 1 469 569 - -
Cone15ag1122 813 CDD STKc_IRAK 500 766 - -
Cone15ag1122 813 CDD PAN_AP_plant 341 426 - -
Cone15ag1122 813 Pfam Protein tyrosine and serine/threonine kinase 495 765 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1122 813 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544(InterPro)
Cone15ag1122 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 569 - -
Cone15ag1122 813 Pfam Domain of unknown function (DUF3403) 768 813 IPR021820 GO:0004674(InterPro)
Cone15ag1122 813 Gene3D Transferase(Phosphotransferase) domain 1 570 779 - -
Cone15ag1122 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Cone15ag1122 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 774 - -
Cone15ag1122 813 Pfam PAN-like domain 344 411 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1107 Cone-Chr14:9234126 Cone15ag1122 Cone-Chr15:9148354 0 dispersed
Cone14ag1108 Cone-Chr14:9240331 Cone15ag1122 Cone-Chr15:9148354 0 dispersed
Cone15ag1114 Cone-Chr15:9112166 Cone15ag1122 Cone-Chr15:9148354 0 dispersed
Cone15ag1116 Cone-Chr15:9119105 Cone15ag1122 Cone-Chr15:9148354 0.00E+00 dispersed
Cone15ag1117 Cone-Chr15:9121978 Cone15ag1122 Cone-Chr15:9148354 3.42E-160 dispersed
Cone15ag1120 Cone-Chr15:9138663 Cone15ag1122 Cone-Chr15:9148354 0 dispersed
Cone15ag1122 Cone-Chr15:9148354 Cone6ag0103 Cone-Chr6:501150 0 dispersed
Cone15ag1121 Cone-Chr15:9143339 Cone15ag1122 Cone-Chr15:9148354 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82169 PF06200 tify 2.30E-14 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1122 - - - 0.0