Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1124 ATGGCTAATGAGTTTAATTCAAGTGGAAACTGGTGGGAAGCTTCTAGAAGCAGATATGAAAGTGGGATGTCACAACCCTCCTCTTCAACACTGAGTAGCTTTGGTTGGCAAGCTGACATGGCGGAGATAAAGGCAGCCCGGTCGACTTCTGTCGGGTCCGTTTCGGTTTCAGGCACTTCTTCCATGTTTTTCCAAGATGCCCAGAAGCTGCAAGGCTCCAATTCCGGTGGCGGTGGAGATCCGACTTTACATATGATGGGTTTAGGCCTCTCCTCCCAAGCTATAGATTGGAACCAAGCTTTACTTCGTGGAGGTGAAAAGTCGGAGAGCAGTTTCCAGTCGATGCTTGAAGATCATAACATGACTCCGGCCACGAATTTTCAGCAAGCCGAAATCGGACAAGTACTTCAGTGGCGATCGGAAAGGGTATTTTCTGGGGATTCTTCAACAAGGGGTTTTGCATTAGATCAAGCTCACGAATTTAGTCCTCAATATAGCTCAGGTGACAGCACCGTAACTTGTCAAGGTTTGAATAGTACTTCTAGTACTAACTTTCAGATGAACTCATCGGCAAATAATTTGTACGGAAGCACTTCAACGATATTACAAGGTTTAGCCGATCATCATCAAAATCAACAATCTTCATCAGCTTCTATGAACTATCAATTTAGTCCTCATCAATTTGGTGTGAATTCTAATGAGATGAATTTGCCAACATCTAATAATTGGACGTCTAAACTGCCTCAATTTTTGAGAACATCATCACCTCCGAAGCAACAACATTTACCCTTCAACAATCATAATGCTTCATTTTGGAATAATAACGCCTCGCAAGCTGCCACAAAAGATGTCCGGCCGAGCTTTTTCCCTTCTTTGCAAACCCAGTTCCATACACCAAACTTTGATGAAAAACCAAAGATAAATGCATCCGAAATTCGCGATTCGGGAACGATGATGAAGAAAAGTGGGAGTGATACCTCTTCAAAAAGAACTCGAAATGAAATACCATCGCCATTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTTCAGCAATTGGTTTCACCTTTCGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAATACGTCAAGTTCCTCCATGAACAAGTTAGTGTTTTAAGCACTCCTTACATGAAAAGTGGAGCTGCTACACAATATCAACAGAATGCAGAAAAATCAAAGGATCCTGATGGACCCAAACATGATCTTAGAAGCCGAGGACTATGTCTTGTACCAGTTTCAAGTACATTCCCGGTCACTCATGAGAGCACGGTAGATTTTTGGACACCCATGTTTGGAGGAACCTTTAGATAA 1362 42.95 MANEFNSSGNWWEASRSRYESGMSQPSSSTLSSFGWQADMAEIKAARSTSVGSVSVSGTSSMFFQDAQKLQGSNSGGGGDPTLHMMGLGLSSQAIDWNQALLRGGEKSESSFQSMLEDHNMTPATNFQQAEIGQVLQWRSERVFSGDSSTRGFALDQAHEFSPQYSSGDSTVTCQGLNSTSSTNFQMNSSANNLYGSTSTILQGLADHHQNQQSSSASMNYQFSPHQFGVNSNEMNLPTSNNWTSKLPQFLRTSSPPKQQHLPFNNHNASFWNNNASQAATKDVRPSFFPSLQTQFHTPNFDEKPKINASEIRDSGTMMKKSGSDTSSKRTRNEIPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYVKFLHEQVSVLSTPYMKSGAATQYQQNAEKSKDPDGPKHDLRSRGLCLVPVSSTFPVTHESTVDFWTPMFGGTFR 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9159475 9162281 - Conep15aG0115000.1 Cone15ag1124 454252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1124 453 MobiDBLite consensus disorder prediction 315 334 - -
Cone15ag1124 453 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 396 IPR036638 GO:0046983(InterPro)
Cone15ag1124 453 FunFam Transcription factor bHLH123 family 343 405 - -
Cone15ag1124 453 Gene3D - 343 408 IPR036638 GO:0046983(InterPro)
Cone15ag1124 453 CDD bHLH_AtbHLH_like 339 390 IPR045239 -
Cone15ag1124 453 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 382 IPR011598 GO:0046983(InterPro)
Cone15ag1124 453 MobiDBLite consensus disorder prediction 315 336 - -
Cone15ag1124 453 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 169 432 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Cone15ag1124 453 MobiDBLite consensus disorder prediction 402 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1124 Cone-Chr15:9159475 Cone5ag1751 Cone-Chr5:12460206 2.90E-49 dispersed
Cone14ag1110 Cone-Chr14:9255036 Cone15ag1124 Cone-Chr15:9159475 1.16E-287 wgd
Cone15ag1124 Cone-Chr15:9159475 Cone6ag0101 Cone-Chr6:496023 5.20E-61 wgd
Cone15ag1124 Cone-Chr15:9159475 Cone9ag1061 Cone-Chr9:5819200 5.13E-55 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1124 - - - 0.0