Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1134 ATGGTAACAGTGTGGGTCTCTTTGAAAAAATCATTAGATTGCAAATCAGATGCATCAGATGTTCATGACCCACAAGTCAGAAAGCAGTACTTAACCAGAATCTTGACAGGAAAAAATGGGAGGAAGTCGGGAAGATCATCATCAGGTTGTTCACGGTCAATAGAAAATCTCAGACATGCCATCCGTGGAGTTGGAAATGGTAATTACAAGAGACGTCACTTTAAAGAAGAAGAAGAAGAAAAGAGGCCATCAGCCTGTAGCCCAAGATCTATAGGAAGCAATGAGTTCCTCGATCCAATAAGACATGAAGTCGTTTTAAGCAATTCAACGTGTGAGCTCAAAATCACGGGTTTAGGTGGCGGTCACGGCAGTGGTGGAGGTGGAAGTGATGGTGAGTCCACCTTTGTGGGAACCTTAAGGCCAGGGACGCCTGGTCCTGGAGTTCCTTGCGGTGGGGGTGGTGGTGGCTCTGCCAAATCCGGGGGCTCTTACGGTGTTGGAGGAGCAGATTGTGGTGGTTATCAATTCAATTGTCATAAGTGTGGAGAGCAGTTTAACAGATGGGATGCTGCTGAATCACATCATCTTTCTAAACATGCTGTTACAGAACTAGTGGATGGAGATTCATCGAGGATGATAGTCGAGATAATATGCCAAACGAGCTGGCTAAAATCCGAGAATCATTGCGGTCGAATCGAGAGGATATTAAAAATTCACAACATGCAAAGAACCCTAGTTAGATTCGAAGAACATAGAGAAATGGTGAAAAGCAAAGCAAGCAAACTACCCACAAAACATCCCCGTTGCTTGGCCGACGGTAACGAGGATTATACAAAACGGGTTCTCTTTAAAAATGGAGACAGAGAGAAGGAACTTGGGTTTTCACAACTTCAACAAGTGGCAGAGCTTTTAACTCCATTGAAATGGTGGAAGAAGAAAAAGGAAGAGGTACATTTTCGAGGAGAAAGGCTTTGA 975 44.1 MVTVWVSLKKSLDCKSDASDVHDPQVRKQYLTRILTGKNGRKSGRSSSGCSRSIENLRHAIRGVGNGNYKRRHFKEEEEEKRPSACSPRSIGSNEFLDPIRHEVVLSNSTCELKITGLGGGHGSGGGGSDGESTFVGTLRPGTPGPGVPCGGGGGGSAKSGGSYGVGGADCGGYQFNCHKCGEQFNRWDAAESHHLSKHAVTELVDGDSSRMIVEIICQTSWLKSENHCGRIERILKIHNMQRTLVRFEEHREMVKSKASKLPTKHPRCLADGNEDYTKRVLFKNGDREKELGFSQLQQVAELLTPLKWWKKKKEEVHFRGERL 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9227314 9228633 - Conep15aG0116000.1 Cone15ag1134 454262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1134 324 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 276 - -
Cone15ag1134 324 MobiDBLite consensus disorder prediction 39 54 - -
Cone15ag1134 324 ProSitePatterns Zinc finger C2H2 type domain signature. 178 199 IPR013087 -
Cone15ag1134 324 MobiDBLite consensus disorder prediction 36 55 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1134 Cone-Chr15:9227314 Cone17ag1266 Cone-Chr17:9127782 8.94E-27 dispersed
Cone14ag1118 Cone-Chr14:9313725 Cone15ag1134 Cone-Chr15:9227314 3.47E-154 wgd
Cone15ag1134 Cone-Chr15:9227314 Cone6ag0092 Cone-Chr6:446661 7.32E-97 wgd
Cone15ag1134 Cone-Chr15:9227314 Cone9ag0108 Cone-Chr9:469629 3.66E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44901 PF14543 TAXi_N 2.00E-34 CL0129 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1134 - - - 0.0