Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag1134 | ATGGTAACAGTGTGGGTCTCTTTGAAAAAATCATTAGATTGCAAATCAGATGCATCAGATGTTCATGACCCACAAGTCAGAAAGCAGTACTTAACCAGAATCTTGACAGGAAAAAATGGGAGGAAGTCGGGAAGATCATCATCAGGTTGTTCACGGTCAATAGAAAATCTCAGACATGCCATCCGTGGAGTTGGAAATGGTAATTACAAGAGACGTCACTTTAAAGAAGAAGAAGAAGAAAAGAGGCCATCAGCCTGTAGCCCAAGATCTATAGGAAGCAATGAGTTCCTCGATCCAATAAGACATGAAGTCGTTTTAAGCAATTCAACGTGTGAGCTCAAAATCACGGGTTTAGGTGGCGGTCACGGCAGTGGTGGAGGTGGAAGTGATGGTGAGTCCACCTTTGTGGGAACCTTAAGGCCAGGGACGCCTGGTCCTGGAGTTCCTTGCGGTGGGGGTGGTGGTGGCTCTGCCAAATCCGGGGGCTCTTACGGTGTTGGAGGAGCAGATTGTGGTGGTTATCAATTCAATTGTCATAAGTGTGGAGAGCAGTTTAACAGATGGGATGCTGCTGAATCACATCATCTTTCTAAACATGCTGTTACAGAACTAGTGGATGGAGATTCATCGAGGATGATAGTCGAGATAATATGCCAAACGAGCTGGCTAAAATCCGAGAATCATTGCGGTCGAATCGAGAGGATATTAAAAATTCACAACATGCAAAGAACCCTAGTTAGATTCGAAGAACATAGAGAAATGGTGAAAAGCAAAGCAAGCAAACTACCCACAAAACATCCCCGTTGCTTGGCCGACGGTAACGAGGATTATACAAAACGGGTTCTCTTTAAAAATGGAGACAGAGAGAAGGAACTTGGGTTTTCACAACTTCAACAAGTGGCAGAGCTTTTAACTCCATTGAAATGGTGGAAGAAGAAAAAGGAAGAGGTACATTTTCGAGGAGAAAGGCTTTGA | 975 | 44.1 | MVTVWVSLKKSLDCKSDASDVHDPQVRKQYLTRILTGKNGRKSGRSSSGCSRSIENLRHAIRGVGNGNYKRRHFKEEEEEKRPSACSPRSIGSNEFLDPIRHEVVLSNSTCELKITGLGGGHGSGGGGSDGESTFVGTLRPGTPGPGVPCGGGGGGSAKSGGSYGVGGADCGGYQFNCHKCGEQFNRWDAAESHHLSKHAVTELVDGDSSRMIVEIICQTSWLKSENHCGRIERILKIHNMQRTLVRFEEHREMVKSKASKLPTKHPRCLADGNEDYTKRVLFKNGDREKELGFSQLQQVAELLTPLKWWKKKKEEVHFRGERL | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9227314 | 9228633 | - | Conep15aG0116000.1 | Cone15ag1134 | 454262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag1134 | 324 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 3 | 276 | - | - | |
Cone15ag1134 | 324 | MobiDBLite | consensus disorder prediction | 39 | 54 | - | - | |
Cone15ag1134 | 324 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 178 | 199 | IPR013087 | - | |
Cone15ag1134 | 324 | MobiDBLite | consensus disorder prediction | 36 | 55 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag1134 | Cone-Chr15:9227314 | Cone17ag1266 | Cone-Chr17:9127782 | 8.94E-27 | dispersed | |
Cone14ag1118 | Cone-Chr14:9313725 | Cone15ag1134 | Cone-Chr15:9227314 | 3.47E-154 | wgd | |
Cone15ag1134 | Cone-Chr15:9227314 | Cone6ag0092 | Cone-Chr6:446661 | 7.32E-97 | wgd | |
Cone15ag1134 | Cone-Chr15:9227314 | Cone9ag0108 | Cone-Chr9:469629 | 3.66E-97 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44901 | PF14543 | TAXi_N | 2.00E-34 | CL0129 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag1134 | - | - | - | 0.0 |