Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1143 ATGTCTGAACTCGACGACCAGATTCCTTCTACATTCGATCCATTTGCTGATGATGCTGAGGACTCTGGTGCGGGAACAAAAGAGTATGTGCATATTCGTGTTCAACAGAGGAATGGTAGGAAAAGCTTGACGACCGTTCAGGGTTTGAAGAAAGAGTTCAGCTACAACAAAATCCTCAAAGATCTCAAGAAAGAATTCTGCTGCAATGGAACTGTTGTCCAGGACCCAGAGCTAGGACAAGTGATTCAACTTCAAGGCGACCAGAGGAAGAATGTATCTTCATTCCTTGTCCAGGCTGGTATCGTGAAGAAGGACACCATCAAGATTCATGGGTTTTGA 339 44.54 MSELDDQIPSTFDPFADDAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKDTIKIHGF 112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9273928 9275930 + Conep15aG0117000.1 Cone15ag1143 454271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1143 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Cone15ag1143 112 NCBIfam translation initiation factor SUI1 7 112 IPR005874 GO:0003743(InterPro)
Cone15ag1143 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - GO:0003723(PANTHER)
Cone15ag1143 112 Pfam Translation initiation factor SUI1 27 101 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone15ag1143 112 Gene3D - 2 112 - -
Cone15ag1143 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743(InterPro)
Cone15ag1143 112 SUPERFAMILY eIF1-like 7 112 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone15ag1143 112 MobiDBLite consensus disorder prediction 1 23 - -
Cone15ag1143 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743(InterPro)
Cone15ag1143 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1143 Cone-Chr15:9273928 Cone9ag0084 Cone-Chr9:368946 2.03E-59 dispersed
Cone12ag1386 Cone-Chr12:10243169 Cone15ag1143 Cone-Chr15:9273928 6.11E-68 wgd
Cone14ag1124 Cone-Chr14:9356178 Cone15ag1143 Cone-Chr15:9273928 2.91E-77 wgd
Cone15ag1143 Cone-Chr15:9273928 Cone8ag1444 Cone-Chr8:11192286 1.05E-68 wgd
Cone15ag1143 Cone-Chr15:9273928 Cone9ag0099 Cone-Chr9:430680 5.58E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1143 K03113 - gmx:100499833 209.92