Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1151 ATGATTTTCTCTTTGAATCAATCTACGGCGGTCGTTAGTAGCTCTGATCTCGTTCTTCGCCGAAAAGCCCTTGCGCCGATACATCAATCTTCGTTTCTACCGCCGTTGCCGGTGCAGAAACCTCTGAGATCGGCCGTGACTCTACGAAGAGCTCTTTACGTTTCGTCCATCAAGAATTTCGGACCGATCAGAGCTGGGAAGAGTGATCTGATCAAATGCGAAGCGTATGAGGCTGATCGATCGGAGCCGAACATAGAGCTGCCGAAGAAAGCAGCAGGTCCGTCCGACGCCGCGAAGAAGTTGAAGATCGGATCGTATTTCGCTCTTTGGTGGGCGTTGAACGTTGTTTTCAATATCTACAATAAGAAGGTTTTGAATGCGTATCCGTATCCATGGCTTACCTCCACTCTTTCTCTGGCTGCTGGTTCTCTAATCATGTTGATCTCATGGGTGACGAAGATCGCTGAAGCTCCCCAGACTGATTTCGAGTTCTGGAAGACTCTGTTTCCTGTTGCTGTGGCCCACACAATCGGGCATGTAGCTGCAACGGTTAGTATGTCAAAGGTTGCGGTCTCATTCACACACATTATCAAGAGTGGTGAACCTGCATTTAGTGTTCTCGTTTCCAGATTCTTGTTGGGCGAGAGCTTCCCTCCTGCGGTTTACCTCTCCTTGCTCCCGATTATTGGTGGTTGTGCCCTCTCTGCTGTCACTGAGCTCAACTTCAATATGATCGGTTTTATGGGGGCGATGATATCGAATTTGGCGTTTGTGTTTAGAAACATATTTTCGAAGAAGGGGATGAAGGGGAAGTCTGTAAGCGGGATGAACTACTATGCATGTCTGTCCATACTGTCTCTGTTGATTCTGACCCCGTTTGCAATTGCTGTCGAGGGACCGCAATTGTGGGCTGCTGGATGGAAAACCGCAATCTCCGAAATTGGACCTCATTTTGTTTGGTGGGTAGCGGCCCAAAGTGTGTTCTATCATCTCTACAACCAAGTTTCCTACATGTCCTTGGATGAAATCTCTCCCTTAACATTTAGTGTTGGAAACACAATGAAACGTATTTCTGTCATCGTCTCTTCTATCATCATCTTCCGCACACCTGTCCAGCCTATCAACGCTCTTGGTGCTGCCATTGCTATCCTCGGAACCTTCTTGTATTCCCAGGCAAAGCAATAA 1185 47.59 MIFSLNQSTAVVSSSDLVLRRKALAPIHQSSFLPPLPVQKPLRSAVTLRRALYVSSIKNFGPIRAGKSDLIKCEAYEADRSEPNIELPKKAAGPSDAAKKLKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWVTKIAEAPQTDFEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPPAVYLSLLPIIGGCALSAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGWKTAISEIGPHFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFRTPVQPINALGAAIAILGTFLYSQAKQ 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9327612 9331574 - Conep15aG0117900.1 Cone15ag1151 454279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1151 394 Pfam Triose-phosphate Transporter family 101 390 IPR004853 -
Cone15ag1151 394 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 393 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone15ag1151 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Cone15ag1151 394 PANTHER SOLUTE CARRIER FAMILY 35 99 393 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1151 Cone-Chr15:9327612 Cone6ag0991 Cone-Chr6:5437760 6.37E-79 dispersed
Cone14ag1131 Cone-Chr14:9400025 Cone15ag1151 Cone-Chr15:9327612 8.06E-276 wgd
Cone15ag1151 Cone-Chr15:9327612 Cone6ag0079 Cone-Chr6:387881 7.77E-212 wgd
Cone15ag1151 Cone-Chr15:9327612 Cone9ag1074 Cone-Chr9:6041529 8.54E-194 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1151 K15283 - csv:101220046 617.846