Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1154 ATGAGTTGCTTCGGATGTTGTGTTTCAGAGGAGAAAATTAACAGGAGATCATTGAAAAGGAGCATAAAGGAGTATCATGACACCAAAACTCTGGCCTCATTTGCTAATATCTCCTTCAAATCTGACAGCAGTAGGCGAAGATATATAACCGAAGAGGTAAAGAAGATTGGGAAAGGAAACATCGCAGTTAAGATCTTCACTTTCCACGAGCTAAATGTTGCGACGAACAACTTCAGCCTTGAGAATCTTATAGGAGAAGGAGGCTTTGGAAGAGTTTACAAAGGCCATCTTGAATGCATGAATCAAACTGTTGCTGTGAAGAAACTTGACAGAAATGGATTTCAAGGAAACAGAGAATTTCTAGTAGAAGTTCTGATGTTGAGTCTTCTTCACCACCCTAACCTTGTCAATTTGGTCGGATATTGTGCTGATGGTGACCAGAGGATTTTGGTTTATGAATTCATGGCTAATGGTTCCCTTGAAGATCATCTTCTCGAGTTAGGTCCGGATAAGCAGCCCCTCGATTGGAATACAAGGATGAAAATTGCGGAAGGTGCGGCAAGAGGGCTTGAGTACTTACACGAAACAGCCAATCCCCCTGTGATATACCGAGATTTCAAAGCATCAAACATTTTATTGGACGAAAATTTCAACCCGAAACTATCTGATTTTGGGCTGGCAAAGTTGGGTCCCACAGGGGATAAGACCCATGTCTCCACAAGAGTTATGGGAACCTACGGCTATTGTGCTCCTGAGTATGCTCTTACTGGACAACTGACCACAAAATCGGATGTATACAGCTATGGAGTTGTGTTTTTGGAGATAATTACTGGAAGGAGAGTTATAGACAATACAAGACCTTCTCAAGAGCAGAATCTAGTTACTTGGGCACAACCCCTATTCAGAGACAAGAGGAAGTTTACATTGATGGTGGATCCATTGCTAGGGAGTGATTACCCTGTAAAGGCTCTCTATCAAGCTCTAGCAGTTGCAGCCATGTGTCTTCAGGAAGAAGCAAGCACTCGGCCTCTGATTAGCGACGTAGTTATTGCTCTCGAATATTTATCCGGAAATAAGGCCGATGAGGTTGTCGGAGGAGGAGAGAGTAATAGTGGAGGGAATTAA 1125 42.84 MSCFGCCVSEEKINRRSLKRSIKEYHDTKTLASFANISFKSDSSRRRYITEEVKKIGKGNIAVKIFTFHELNVATNNFSLENLIGEGGFGRVYKGHLECMNQTVAVKKLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEFMANGSLEDHLLELGPDKQPLDWNTRMKIAEGAARGLEYLHETANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSYGVVFLEIITGRRVIDNTRPSQEQNLVTWAQPLFRDKRKFTLMVDPLLGSDYPVKALYQALAVAAMCLQEEASTRPLISDVVIALEYLSGNKADEVVGGGESNSGGN 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9341508 9344520 - Conep15aG0118200.1 Cone15ag1154 454282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1154 374 PANTHER OS07G0668900 PROTEIN 43 361 - -
Cone15ag1154 374 Gene3D Transferase(Phosphotransferase) domain 1 155 366 - -
Cone15ag1154 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1154 374 CDD STKc_IRAK 84 353 - -
Cone15ag1154 374 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524(InterPro)
Cone15ag1154 374 Gene3D Phosphorylase Kinase; domain 1 62 154 - -
Cone15ag1154 374 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Cone15ag1154 374 SUPERFAMILY Protein kinase-like (PK-like) 61 353 IPR011009 -
Cone15ag1154 374 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1154 374 Pfam Protein kinase domain 79 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1154 374 FunFam Serine/threonine-protein kinase PBS1 155 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1154 Cone-Chr15:9341508 Cone7ag0170 Cone-Chr7:711534 3.65E-168 dispersed
Cone4ag1759 Cone-Chr4:12913216 Cone15ag1154 Cone-Chr15:9341508 1.31E-91 dispersed
Cone9ag1056 Cone-Chr9:5752906 Cone15ag1154 Cone-Chr15:9341508 1.99E-66 dispersed
Cone9ag1621 Cone-Chr9:11559669 Cone15ag1154 Cone-Chr15:9341508 1.04E-96 dispersed
Cone14ag1133 Cone-Chr14:9414814 Cone15ag1154 Cone-Chr15:9341508 7.77E-257 wgd
Cone15ag1154 Cone-Chr15:9341508 Cone6ag1064 Cone-Chr6:6225237 5.22E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82170 PF03638 TCR 1.20E-11 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1154 - - - 0.0